RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 GRINAQ7Z429 371 aa13.54□□□□□ -0.24
SDF4-207ENST00000494748 FAM24BQ8N5W8 94 aa13.54□□□□□ -0.24
SDF4-207ENST00000494748 OR9K2Q8NGE7 335 aa13.54□□□□□ -0.24
SDF4-207ENST00000494748 MAFIPQ8WZ33 124 aa13.54□□□□□ -0.24
SDF4-207ENST00000494748 ARL5BQ96KC2 179 aa13.54□□□□□ -0.24
SDF4-207ENST00000494748 IGKV1D-8A0A087WSZ0 117 aa13.54□□□□□ -0.24
SDF4-207ENST00000494748 AP4M1O00189 453 aa13.54□□□□□ -0.24
SDF4-207ENST00000494748 KLF8O95600 359 aaPredicted RBP13.54□□□□□ -0.24
SDF4-207ENST00000494748 TNFP01375 233 aa13.54□□□□□ -0.24
SDF4-207ENST00000494748 ARG1P05089 322 aa13.54□□□□□ -0.24
SDF4-207ENST00000494748 SFTPBP07988 381 aa13.54□□□□□ -0.24
SDF4-207ENST00000494748 DANCRP0C864 163 aa13.54□□□□□ -0.24
SDF4-207ENST00000494748 FHITP49789 147 aa13.54□□□□□ -0.24
SDF4-207ENST00000494748 GUK1Q16774 197 aa13.54□□□□□ -0.24
SDF4-207ENST00000494748 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.54□□□□□ -0.24
SDF4-207ENST00000494748 YAF2Q8IY57 180 aa13.54□□□□□ -0.24
SDF4-207ENST00000494748 TMEM41AQ96HV5 264 aa13.54□□□□□ -0.24
SDF4-207ENST00000494748 SPACA1Q9HBV2 294 aa13.54□□□□□ -0.24
SDF4-207ENST00000494748 IGKV1-9A0A0C4DH69 117 aa13.53□□□□□ -0.24
SDF4-207ENST00000494748 A6NIZ1 184 aa13.53□□□□□ -0.24
SDF4-207ENST00000494748 K7EPK0 472 aa13.53□□□□□ -0.24
SDF4-207ENST00000494748 YKT6O15498 198 aa13.53□□□□□ -0.24
SDF4-207ENST00000494748 GATCO43716 136 aaKnown RBP13.53□□□□□ -0.24
SDF4-207ENST00000494748 SULT1A1P50225 295 aa13.53□□□□□ -0.24
SDF4-207ENST00000494748 RAP1BP61224 184 aa13.53□□□□□ -0.24
SDF4-207ENST00000494748 RAP1AP62834 184 aa13.53□□□□□ -0.24
SDF4-207ENST00000494748 ACY1Q03154 408 aa13.53□□□□□ -0.24
SDF4-207ENST00000494748 FAM71E2Q8N5Q1 922 aa13.53□□□□□ -0.24
SDF4-207ENST00000494748 PAPOLGQ9BWT3 736 aaKnown RBP13.53□□□□□ -0.24
SDF4-207ENST00000494748 TMEM59Q9BXS4 323 aa13.53□□□□□ -0.24
SDF4-207ENST00000494748 SMIM3Q9BZL3 60 aa13.53□□□□□ -0.24
SDF4-207ENST00000494748 B3GALT5Q9Y2C3 310 aa13.53□□□□□ -0.24
SDF4-207ENST00000494748 LAMA1P25391 3075 aa13.53□□□□□ -0.24
SDF4-207ENST00000494748 NME2P1O60361 137 aa13.53□□□□□ -0.24
SDF4-207ENST00000494748 AMY2BP19961 511 aa13.53□□□□□ -0.24
SDF4-207ENST00000494748 IL12BP29460 328 aa13.53□□□□□ -0.24
SDF4-207ENST00000494748 CLEC9AQ6UXN8 241 aa13.53□□□□□ -0.24
SDF4-207ENST00000494748 C1QL4Q86Z23 238 aa13.53□□□□□ -0.24
SDF4-207ENST00000494748 KCNG3Q8TAE7 436 aa13.53□□□□□ -0.24
SDF4-207ENST00000494748 PRRX2Q99811 253 aa13.53□□□□□ -0.24
SDF4-207ENST00000494748 LHFPL6Q9Y693 200 aa13.53□□□□□ -0.24
SDF4-207ENST00000494748 A0A1W2PPE2 198 aa13.53□□□□□ -0.24
SDF4-207ENST00000494748 AHSA1O95433 338 aa13.53□□□□□ -0.24
SDF4-207ENST00000494748 IAH1Q2TAA2 248 aaPredicted RBP13.53□□□□□ -0.24
SDF4-207ENST00000494748 OPN5Q6U736 354 aa13.53□□□□□ -0.24
SDF4-207ENST00000494748 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.53□□□□□ -0.24
SDF4-207ENST00000494748 TCTN2Q96GX1 697 aa13.53□□□□□ -0.24
SDF4-207ENST00000494748 GGACTQ9BVM4 153 aa13.53□□□□□ -0.24
SDF4-207ENST00000494748 SNU13P55769 128 aaKnown RBP13.52□□□□□ -0.24
SDF4-207ENST00000494748 ARMC6Q6NXE6 501 aa13.52□□□□□ -0.24
SDF4-207ENST00000494748 TMEM156Q8N614 296 aa13.52□□□□□ -0.24
SDF4-207ENST00000494748 EMG1Q92979 244 aaKnown RBP13.52□□□□□ -0.24
SDF4-207ENST00000494748 SCGB3A2Q96PL1 93 aa13.52□□□□□ -0.24
SDF4-207ENST00000494748 ST6GALNAC5Q9BVH7 336 aa13.52□□□□□ -0.24
SDF4-207ENST00000494748 FBRSQ9HAH7 460 aa13.52□□□□□ -0.24
SDF4-207ENST00000494748 HDGFL3Q9Y3E1 203 aa13.52□□□□□ -0.24
SDF4-207ENST00000494748 NPIPB13A6NJU9 1138 aa13.52□□□□□ -0.25
SDF4-207ENST00000494748 NPIPB4C9JG80 1138 aa13.52□□□□□ -0.25
SDF4-207ENST00000494748 HPNP05981 417 aa13.52□□□□□ -0.25
SDF4-207ENST00000494748 DHPSP49366 369 aaPredicted RBP13.52□□□□□ -0.25
SDF4-207ENST00000494748 OR2B8PP59922 312 aa13.52□□□□□ -0.25
SDF4-207ENST00000494748 C1orf61Q13536 156 aa13.52□□□□□ -0.25
SDF4-207ENST00000494748 TMEM240Q5SV17 173 aa13.52□□□□□ -0.25
SDF4-207ENST00000494748 NCMAPQ5T1S8 102 aa13.52□□□□□ -0.25
SDF4-207ENST00000494748 DNM1P34Q6PK57 102 aa13.52□□□□□ -0.25
SDF4-207ENST00000494748 C1QL2Q7Z5L3 287 aa13.52□□□□□ -0.25
SDF4-207ENST00000494748 ZNF441Q8N8Z8 693 aa13.52□□□□□ -0.25
SDF4-207ENST00000494748 SHDQ96IW2 340 aa13.52□□□□□ -0.25
SDF4-207ENST00000494748 TBL1XR1Q9BZK7 514 aa13.52□□□□□ -0.25
SDF4-207ENST00000494748 DUSP15Q9H1R2 295 aaPredicted RBP13.52□□□□□ -0.25
SDF4-207ENST00000494748 EHFQ9NZC4 300 aa13.52□□□□□ -0.25
SDF4-207ENST00000494748 ZDHHC8Q9ULC8 765 aa13.52□□□□□ -0.25
SDF4-207ENST00000494748 H3BMH7 237 aa13.52□□□□□ -0.25
SDF4-207ENST00000494748 HSD11B2P80365 405 aa13.52□□□□□ -0.25
SDF4-207ENST00000494748 CDPF1Q6NVV7 123 aa13.52□□□□□ -0.25
SDF4-207ENST00000494748 OR8B12Q8NGG6 310 aa13.52□□□□□ -0.25
SDF4-207ENST00000494748 MRPL24Q96A35 216 aaKnown RBP13.52□□□□□ -0.25
SDF4-207ENST00000494748 RGCCQ9H4X1 137 aa13.52□□□□□ -0.25
SDF4-207ENST00000494748 E9PLN8 166 aa13.51□□□□□ -0.25
SDF4-207ENST00000494748 IFNA2P01563 188 aa13.51□□□□□ -0.25
SDF4-207ENST00000494748 SURF2Q15527 256 aaPredicted RBP13.51□□□□□ -0.25
SDF4-207ENST00000494748 COMMD1Q8N668 190 aa13.51□□□□□ -0.25
SDF4-207ENST00000494748 OR56B1Q8NGI3 324 aa13.51□□□□□ -0.25
SDF4-207ENST00000494748 INTS12Q96CB8 462 aaKnown RBP13.51□□□□□ -0.25
SDF4-207ENST00000494748 GINS3Q9BRX5 216 aa13.51□□□□□ -0.25
SDF4-207ENST00000494748 WWTR1Q9GZV5 400 aa13.51□□□□□ -0.25
SDF4-207ENST00000494748 TMPRSS5Q9H3S3 457 aa13.51□□□□□ -0.25
SDF4-207ENST00000494748 NPIPA5E9PKD4 350 aa13.51□□□□□ -0.25
SDF4-207ENST00000494748 TSPAN15O95858 294 aa13.51□□□□□ -0.25
SDF4-207ENST00000494748 HSF1Q00613 529 aa13.51□□□□□ -0.25
SDF4-207ENST00000494748 POU3F1Q03052 451 aaPredicted RBP13.51□□□□□ -0.25
SDF4-207ENST00000494748 OR2B11Q5JQS5 317 aa13.51□□□□□ -0.25
SDF4-207ENST00000494748 ADAM5Q6NVV9 412 aa13.51□□□□□ -0.25
SDF4-207ENST00000494748 HEPN1Q6WQI6 88 aa13.51□□□□□ -0.25
SDF4-207ENST00000494748 ZNF574Q6ZN55 896 aaPredicted RBP13.51□□□□□ -0.25
SDF4-207ENST00000494748 NPIPA1Q9UND3 350 aa13.51□□□□□ -0.25
SDF4-207ENST00000494748 DMRT1Q9Y5R6 373 aa13.51□□□□□ -0.25
SDF4-207ENST00000494748 C1QL1O75973 258 aa13.51□□□□□ -0.25
SDF4-207ENST00000494748 CCL1P22362 96 aa13.51□□□□□ -0.25
SDF4-207ENST00000494748 DAP3P51398 398 aaKnown RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms