RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 AQP12BA6NM10 295 aa9.58□□□□□ -0.88
VTI1A-208ENST00000494728 PRODHO43272 600 aa9.58□□□□□ -0.88
VTI1A-208ENST00000494728 AKR7A2O43488 359 aa9.58□□□□□ -0.88
VTI1A-208ENST00000494728 NDUFA2O43678 99 aa9.58□□□□□ -0.88
VTI1A-208ENST00000494728 IGHV4-59P01825 116 aa9.58□□□□□ -0.88
VTI1A-208ENST00000494728 MRPL3P09001 348 aaKnown RBP9.58□□□□□ -0.88
VTI1A-208ENST00000494728 OSMP13725 252 aa9.58□□□□□ -0.88
VTI1A-208ENST00000494728 DCTDP32321 178 aa9.58□□□□□ -0.88
VTI1A-208ENST00000494728 KLRD1Q13241 179 aa9.58□□□□□ -0.88
VTI1A-208ENST00000494728 IKZF1Q13422 519 aa9.58□□□□□ -0.88
VTI1A-208ENST00000494728 GK3PQ14409 553 aa9.58□□□□□ -0.88
VTI1A-208ENST00000494728 METTL11BQ5VVY1 283 aa9.58□□□□□ -0.88
VTI1A-208ENST00000494728 RHOUQ7L0Q8 258 aa9.58□□□□□ -0.88
VTI1A-208ENST00000494728 SHFQ7M4L6 423 aa9.58□□□□□ -0.88
VTI1A-208ENST00000494728 BCDIN3DQ7Z5W3 292 aaKnown RBP9.58□□□□□ -0.88
VTI1A-208ENST00000494728 AQP12AQ8IXF9 295 aa9.58□□□□□ -0.88
VTI1A-208ENST00000494728 PNKDQ8N490 385 aa9.58□□□□□ -0.88
VTI1A-208ENST00000494728 GALNT4Q8N4A0 578 aa9.58□□□□□ -0.88
VTI1A-208ENST00000494728 Q8N7P7 452 aa9.58□□□□□ -0.88
VTI1A-208ENST00000494728 PNLDC1Q8NA58 520 aaKnown RBP9.58□□□□□ -0.88
VTI1A-208ENST00000494728 SCCPDHQ8NBX0 429 aa9.58□□□□□ -0.88
VTI1A-208ENST00000494728 LY6G5BQ8NDX9 201 aa9.58□□□□□ -0.88
VTI1A-208ENST00000494728 OR5P3Q8WZ94 311 aa9.58□□□□□ -0.88
VTI1A-208ENST00000494728 SLC7A6OSQ96CW6 309 aaPredicted RBP9.58□□□□□ -0.88
VTI1A-208ENST00000494728 GAFA1Q96PS6 74 aa9.58□□□□□ -0.88
VTI1A-208ENST00000494728 PKP2Q99959 881 aa9.58□□□□□ -0.88
VTI1A-208ENST00000494728 ELL3Q9HB65 397 aaPredicted RBP9.58□□□□□ -0.88
VTI1A-208ENST00000494728 SLC25A19Q9HC21 320 aa9.58□□□□□ -0.88
VTI1A-208ENST00000494728 TRIM36Q9NQ86 728 aa9.58□□□□□ -0.88
VTI1A-208ENST00000494728 SIRT7Q9NRC8 400 aa9.58□□□□□ -0.88
VTI1A-208ENST00000494728 FAM206AQ9NX38 181 aa9.58□□□□□ -0.88
VTI1A-208ENST00000494728 DNAJB11Q9UBS4 358 aa9.58□□□□□ -0.88
VTI1A-208ENST00000494728 COPS3Q9UNS2 423 aa9.58□□□□□ -0.88
VTI1A-208ENST00000494728 DNAH3Q8TD57 4116 aa9.58□□□□□ -0.88
VTI1A-208ENST00000494728 TCRBV3S1A0A5B6 114 aa9.57□□□□□ -0.88
VTI1A-208ENST00000494728 RNASEK-C17orf49H0YIS7 233 aa9.57□□□□□ -0.88
VTI1A-208ENST00000494728 FKBP6O75344 327 aa9.57□□□□□ -0.88
VTI1A-208ENST00000494728 E2F6O75461 281 aa9.57□□□□□ -0.88
VTI1A-208ENST00000494728 RHBDL1O75783 438 aa9.57□□□□□ -0.88
VTI1A-208ENST00000494728 LIPFP07098 398 aa9.57□□□□□ -0.88
VTI1A-208ENST00000494728 MUC1P15941 1255 aaPredicted RBP9.57□□□□□ -0.88
VTI1A-208ENST00000494728 ALOX5APP20292 161 aa9.57□□□□□ -0.88
VTI1A-208ENST00000494728 PAICSP22234 425 aaKnown RBP9.57□□□□□ -0.88
VTI1A-208ENST00000494728 GNALP38405 381 aa9.57□□□□□ -0.88
VTI1A-208ENST00000494728 TGM4P49221 684 aa9.57□□□□□ -0.88
VTI1A-208ENST00000494728 RAG2P55895 527 aa9.57□□□□□ -0.88
VTI1A-208ENST00000494728 CBX1P83916 185 aa9.57□□□□□ -0.88
VTI1A-208ENST00000494728 MFGE8Q08431 387 aaPredicted RBP9.57□□□□□ -0.88
VTI1A-208ENST00000494728 APOFQ13790 326 aa9.57□□□□□ -0.88
VTI1A-208ENST00000494728 FLOT2Q14254 428 aa9.57□□□□□ -0.88
VTI1A-208ENST00000494728 DGUOKQ16854 277 aa9.57□□□□□ -0.88
VTI1A-208ENST00000494728 MICBQ29980 383 aa9.57□□□□□ -0.88
VTI1A-208ENST00000494728 CDONQ4KMG0 1287 aa9.57□□□□□ -0.88
VTI1A-208ENST00000494728 TRPM8Q7Z2W7 1104 aa9.57□□□□□ -0.88
VTI1A-208ENST00000494728 KIR3DL3Q8N743 410 aa9.57□□□□□ -0.88
VTI1A-208ENST00000494728 ZNF454Q8N9F8 522 aa9.57□□□□□ -0.88
VTI1A-208ENST00000494728 CSNK2A3Q8NEV1 391 aa9.57□□□□□ -0.88
VTI1A-208ENST00000494728 GATAD2BQ8WXI9 593 aa9.57□□□□□ -0.88
VTI1A-208ENST00000494728 PIGCQ92535 297 aa9.57□□□□□ -0.88
VTI1A-208ENST00000494728 PPP1R14AQ96A00 147 aa9.57□□□□□ -0.88
VTI1A-208ENST00000494728 RAB3IPQ96QF0 476 aaPredicted RBP9.57□□□□□ -0.88
VTI1A-208ENST00000494728 NOX4Q9NPH5 578 aa9.57□□□□□ -0.88
VTI1A-208ENST00000494728 ONECUT1Q9UBC0 465 aa9.57□□□□□ -0.88
VTI1A-208ENST00000494728 MMP24Q9Y5R2 645 aa9.57□□□□□ -0.88
VTI1A-208ENST00000494728 ANXA2P2A6NMY6 339 aa9.56□□□□□ -0.88
VTI1A-208ENST00000494728 GNGT2O14610 69 aa9.56□□□□□ -0.88
VTI1A-208ENST00000494728 PRKYO43930 277 aa9.56□□□□□ -0.88
VTI1A-208ENST00000494728 TIPRLO75663 272 aa9.56□□□□□ -0.88
VTI1A-208ENST00000494728 CST4P01036 141 aa9.56□□□□□ -0.88
VTI1A-208ENST00000494728 IGLV3-1P01715 115 aa9.56□□□□□ -0.88
VTI1A-208ENST00000494728 APOC1P02654 83 aa9.56□□□□□ -0.88
VTI1A-208ENST00000494728 CFL1P23528 166 aaKnown RBP9.56□□□□□ -0.88
VTI1A-208ENST00000494728 EPHA2P29317 976 aa9.56□□□□□ -0.88
VTI1A-208ENST00000494728 GPM6AP51674 278 aa9.56□□□□□ -0.88
VTI1A-208ENST00000494728 BPIFB3P59826 476 aa9.56□□□□□ -0.88
VTI1A-208ENST00000494728 RPS7P62081 194 aaKnown RBP9.56□□□□□ -0.88
VTI1A-208ENST00000494728 IL5RAQ01344 420 aa9.56□□□□□ -0.88
VTI1A-208ENST00000494728 MZT1Q08AG7 82 aa9.56□□□□□ -0.88
VTI1A-208ENST00000494728 PDCD1Q15116 288 aa9.56□□□□□ -0.88
VTI1A-208ENST00000494728 TAF9Q16594 264 aa9.56□□□□□ -0.88
VTI1A-208ENST00000494728 FAM76BQ5HYJ3 339 aa9.56□□□□□ -0.88
VTI1A-208ENST00000494728 CEP78Q5JTW2 689 aa9.56□□□□□ -0.88
VTI1A-208ENST00000494728 ZNF788Q6ZQV5 615 aa9.56□□□□□ -0.88
VTI1A-208ENST00000494728 SPATA24Q86W54 205 aa9.56□□□□□ -0.88
VTI1A-208ENST00000494728 LDLRAD3Q86YD5 345 aa9.56□□□□□ -0.88
VTI1A-208ENST00000494728 ZDHHC23Q8IYP9 409 aa9.56□□□□□ -0.88
VTI1A-208ENST00000494728 TMEM86BQ8N661 226 aa9.56□□□□□ -0.88
VTI1A-208ENST00000494728 ANGPTL6Q8NI99 470 aa9.56□□□□□ -0.88
VTI1A-208ENST00000494728 TNFRSF14Q92956 283 aa9.56□□□□□ -0.88
VTI1A-208ENST00000494728 C12orf43Q96C57 262 aaKnown RBP9.56□□□□□ -0.88
VTI1A-208ENST00000494728 MICU1Q9BPX6 476 aa9.56□□□□□ -0.88
VTI1A-208ENST00000494728 DCTN5Q9BTE1 182 aa9.56□□□□□ -0.88
VTI1A-208ENST00000494728 RTL8AQ9BWD3 113 aa9.56□□□□□ -0.88
VTI1A-208ENST00000494728 SLITRK2Q9H156 845 aa9.56□□□□□ -0.88
VTI1A-208ENST00000494728 RGCCQ9H4X1 137 aa9.56□□□□□ -0.88
VTI1A-208ENST00000494728 CNTD2Q9H8S5 307 aa9.56□□□□□ -0.88
VTI1A-208ENST00000494728 SP140LQ9H930 580 aa9.56□□□□□ -0.88
VTI1A-208ENST00000494728 HAO2Q9NYQ3 351 aa9.56□□□□□ -0.88
VTI1A-208ENST00000494728 DNAJB9Q9UBS3 223 aa9.56□□□□□ -0.88
VTI1A-208ENST00000494728 ZNF391Q9UJN7 358 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms