RNA–Protein interactions for RNA: ENST00000494000.1

FNDC3B-212, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 1 (best)

Gene FNDC3B, Length 2,600 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-212ENST00000494000 C19orf18Q8NEA5 215 aa5.89□□□□□ -1.47
FNDC3B-212ENST00000494000 GJC3Q8NFK1 279 aa5.89□□□□□ -1.47
FNDC3B-212ENST00000494000 OR2G2Q8NGZ5 317 aa5.89□□□□□ -1.47
FNDC3B-212ENST00000494000 FAM110DQ8TAY7 271 aaPredicted RBP5.89□□□□□ -1.47
FNDC3B-212ENST00000494000 GPR148Q8TDV2 347 aa5.89□□□□□ -1.47
FNDC3B-212ENST00000494000 TMEM203Q969S6 136 aa5.89□□□□□ -1.47
FNDC3B-212ENST00000494000 MS4A3Q96HJ5 214 aa5.89□□□□□ -1.47
FNDC3B-212ENST00000494000 BOD1Q96IK1 185 aa5.89□□□□□ -1.47
FNDC3B-212ENST00000494000 UNKLQ9H9P5 680 aaKnown RBP5.89□□□□□ -1.47
FNDC3B-212ENST00000494000 ELOVL3Q9HB03 270 aa5.89□□□□□ -1.47
FNDC3B-212ENST00000494000 ACOXLQ9NUZ1 547 aa5.89□□□□□ -1.47
FNDC3B-212ENST00000494000 KLK13Q9UKR3 277 aa5.89□□□□□ -1.47
FNDC3B-212ENST00000494000 R4GMQ9 66 aa5.89□□□□□ -1.47
FNDC3B-212ENST00000494000 DCDC2BA2VCK2 349 aa5.88□□□□□ -1.47
FNDC3B-212ENST00000494000 LEUTXA8MZ59 168 aa5.88□□□□□ -1.47
FNDC3B-212ENST00000494000 LOC110117498-PIK3R3F6TDL0 507 aa5.88□□□□□ -1.47
FNDC3B-212ENST00000494000 ISG15P05161 165 aa5.88□□□□□ -1.47
FNDC3B-212ENST00000494000 UBCP0CG48 685 aaKnown RBP5.88□□□□□ -1.47
FNDC3B-212ENST00000494000 WT1P19544 449 aaPredicted RBP5.88□□□□□ -1.47
FNDC3B-212ENST00000494000 SDC2P34741 201 aa5.88□□□□□ -1.47
FNDC3B-212ENST00000494000 RPS19P39019 145 aaKnown RBP5.88□□□□□ -1.47
FNDC3B-212ENST00000494000 HCCSP53701 268 aa5.88□□□□□ -1.47
FNDC3B-212ENST00000494000 RIN1Q13671 783 aa5.88□□□□□ -1.47
FNDC3B-212ENST00000494000 GAMTQ14353 236 aa5.88□□□□□ -1.47
FNDC3B-212ENST00000494000 Q499Y3 187 aa5.88□□□□□ -1.47
FNDC3B-212ENST00000494000 ZMAT1Q5H9K5 638 aa5.88□□□□□ -1.47
FNDC3B-212ENST00000494000 CEACAM19Q7Z692 300 aa5.88□□□□□ -1.47
FNDC3B-212ENST00000494000 BATF2Q8N1L9 274 aa5.88□□□□□ -1.47
FNDC3B-212ENST00000494000 ZFP41Q8N8Y5 198 aa5.88□□□□□ -1.47
FNDC3B-212ENST00000494000 C4orf45Q96LM5 186 aa5.88□□□□□ -1.47
FNDC3B-212ENST00000494000 PAPOLGQ9BWT3 736 aaKnown RBP5.88□□□□□ -1.47
FNDC3B-212ENST00000494000 HDHD5Q9BXW7 423 aa5.88□□□□□ -1.47
FNDC3B-212ENST00000494000 HES7Q9BYE0 225 aa5.88□□□□□ -1.47
FNDC3B-212ENST00000494000 PRDM14Q9GZV8 571 aa5.88□□□□□ -1.47
FNDC3B-212ENST00000494000 SIRPDQ9H106 197 aa5.88□□□□□ -1.47
FNDC3B-212ENST00000494000 SEC61A2Q9H9S3 476 aa5.88□□□□□ -1.47
FNDC3B-212ENST00000494000 CGGBP1Q9UFW8 167 aaPredicted RBP5.88□□□□□ -1.47
FNDC3B-212ENST00000494000 TRBV5-5A0A0J9YX44 114 aa5.88□□□□□ -1.47
FNDC3B-212ENST00000494000 ZNF785A8K8V0 405 aa5.88□□□□□ -1.47
FNDC3B-212ENST00000494000 RPL36A-HNRNPH2H7BZ11 118 aa5.88□□□□□ -1.47
FNDC3B-212ENST00000494000 SLC19A2O60779 497 aa5.88□□□□□ -1.47
FNDC3B-212ENST00000494000 MRPL33O75394 65 aaKnown RBP5.88□□□□□ -1.47
FNDC3B-212ENST00000494000 FARS2O95363 451 aaKnown RBP5.88□□□□□ -1.47
FNDC3B-212ENST00000494000 IFNA6P05013 189 aa5.88□□□□□ -1.47
FNDC3B-212ENST00000494000 CD2P06729 351 aa5.88□□□□□ -1.47
FNDC3B-212ENST00000494000 ERCC1P07992 297 aaPredicted RBP5.88□□□□□ -1.47
FNDC3B-212ENST00000494000 CST2P09228 141 aa5.88□□□□□ -1.47
FNDC3B-212ENST00000494000 ACHEP22303 614 aa5.88□□□□□ -1.47
FNDC3B-212ENST00000494000 OPRL1P41146 370 aa5.88□□□□□ -1.47
FNDC3B-212ENST00000494000 PPP3R1P63098 170 aa5.88□□□□□ -1.47
FNDC3B-212ENST00000494000 NKX6-1P78426 367 aaPredicted RBP5.88□□□□□ -1.47
FNDC3B-212ENST00000494000 IFITM3Q01628 133 aa5.88□□□□□ -1.47
FNDC3B-212ENST00000494000 FMODQ06828 376 aa5.88□□□□□ -1.47
FNDC3B-212ENST00000494000 DOC2BQ14184 412 aa5.88□□□□□ -1.47
FNDC3B-212ENST00000494000 EIF2S3LQ2VIR3 472 aaKnown RBP5.88□□□□□ -1.47
FNDC3B-212ENST00000494000 HSD17B12Q53GQ0 312 aa5.88□□□□□ -1.47
FNDC3B-212ENST00000494000 SPANXN2Q5MJ10 180 aa5.88□□□□□ -1.47
FNDC3B-212ENST00000494000 DDI2Q5TDH0 399 aa5.88□□□□□ -1.47
FNDC3B-212ENST00000494000 FAM27BQ5VT28 67 aa5.88□□□□□ -1.47
FNDC3B-212ENST00000494000 LRFN4Q6PJG9 635 aa5.88□□□□□ -1.47
FNDC3B-212ENST00000494000 Q6ZS92 163 aa5.88□□□□□ -1.47
FNDC3B-212ENST00000494000 GDPD3Q7L5L3 318 aa5.88□□□□□ -1.47
FNDC3B-212ENST00000494000 ZNF676Q8N7Q3 588 aa5.88□□□□□ -1.47
FNDC3B-212ENST00000494000 FOXRED1Q96CU9 486 aaPredicted RBP5.88□□□□□ -1.47
FNDC3B-212ENST00000494000 SLAMF6Q96DU3 332 aa5.88□□□□□ -1.47
FNDC3B-212ENST00000494000 HARBI1Q96MB7 349 aa5.88□□□□□ -1.47
FNDC3B-212ENST00000494000 AKIP1Q9NQ31 210 aa5.88□□□□□ -1.47
FNDC3B-212ENST00000494000 G6PC2Q9NQR9 355 aa5.88□□□□□ -1.47
FNDC3B-212ENST00000494000 NAGKQ9UJ70 344 aa5.88□□□□□ -1.47
FNDC3B-212ENST00000494000 WASF3Q9UPY6 502 aa5.88□□□□□ -1.47
FNDC3B-212ENST00000494000 SIRT4Q9Y6E7 314 aaPredicted RBP5.88□□□□□ -1.47
FNDC3B-212ENST00000494000 MEGF11A6BM72 1044 aa5.87□□□□□ -1.47
FNDC3B-212ENST00000494000 OR4C45A6NMZ5 311 aa5.87□□□□□ -1.47
FNDC3B-212ENST00000494000 ARPC5O15511 151 aa5.87□□□□□ -1.47
FNDC3B-212ENST00000494000 RAMP1O60894 148 aa5.87□□□□□ -1.47
FNDC3B-212ENST00000494000 ITGB2P05107 769 aa5.87□□□□□ -1.47
FNDC3B-212ENST00000494000 HOXD4P09016 255 aaPredicted RBP5.87□□□□□ -1.47
FNDC3B-212ENST00000494000 RAB3BP20337 219 aa5.87□□□□□ -1.47
FNDC3B-212ENST00000494000 HIST1H3AP68431 136 aa5.87□□□□□ -1.47
FNDC3B-212ENST00000494000 TAF13Q15543 124 aa5.87□□□□□ -1.47
FNDC3B-212ENST00000494000 HIST2H3PS2Q5TEC6 136 aa5.87□□□□□ -1.47
FNDC3B-212ENST00000494000 MBNL2Q5VZF2 373 aaKnown RBP5.87□□□□□ -1.47
FNDC3B-212ENST00000494000 CARD17Q5XLA6 110 aa5.87□□□□□ -1.47
FNDC3B-212ENST00000494000 LYPD4Q6UWN0 246 aa5.87□□□□□ -1.47
FNDC3B-212ENST00000494000 HIST2H3AQ71DI3 136 aa5.87□□□□□ -1.47
FNDC3B-212ENST00000494000 OR52B4Q8NGK2 314 aa5.87□□□□□ -1.47
FNDC3B-212ENST00000494000 WDYHV1Q96HA8 205 aa5.87□□□□□ -1.47
FNDC3B-212ENST00000494000 RCC1LQ96I51 464 aaKnown RBP5.87□□□□□ -1.47
FNDC3B-212ENST00000494000 ZNF385AQ96PM9 386 aaKnown RBP5.87□□□□□ -1.47
FNDC3B-212ENST00000494000 ABRACLQ9P1F3 81 aa5.87□□□□□ -1.47
FNDC3B-212ENST00000494000 GDF2Q9UK05 429 aaPredicted RBP5.87□□□□□ -1.47
FNDC3B-212ENST00000494000 KLHDC2Q9Y2U9 406 aa5.87□□□□□ -1.47
FNDC3B-212ENST00000494000 CMAHPQ9Y471 501 aa5.87□□□□□ -1.47
FNDC3B-212ENST00000494000 LRP12Q9Y561 859 aa5.87□□□□□ -1.47
FNDC3B-212ENST00000494000 TNFRSF18Q9Y5U5 241 aa5.87□□□□□ -1.47
FNDC3B-212ENST00000494000 IGHV3-15A0A0B4J1V0 119 aa5.87□□□□□ -1.47
FNDC3B-212ENST00000494000 A0A1W2PPV4 95 aa5.87□□□□□ -1.47
FNDC3B-212ENST00000494000 CGB1A6NKQ9 187 aa5.87□□□□□ -1.47
FNDC3B-212ENST00000494000 OR2AT4A6NND4 320 aa5.87□□□□□ -1.47
FNDC3B-212ENST00000494000 ITGB1BP1O14713 200 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms