RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 METAP1DQ6UB28 335 aaPredicted RBP1.52□□□□□ -2.17
ITGB1-216ENST00000493758 VKORC1L1Q8N0U8 176 aa1.52□□□□□ -2.17
ITGB1-216ENST00000493758 GABRG1Q8N1C3 465 aa1.52□□□□□ -2.17
ITGB1-216ENST00000493758 LINC00469Q8N7U9 141 aa1.52□□□□□ -2.17
ITGB1-216ENST00000493758 ZNF420Q8TAQ5 688 aaPredicted RBP1.52□□□□□ -2.17
ITGB1-216ENST00000493758 TSEN15Q8WW01 171 aaKnown RBP1.52□□□□□ -2.17
ITGB1-216ENST00000493758 SLC22A7Q9Y694 548 aa1.52□□□□□ -2.17
ITGB1-216ENST00000493758 UBN2Q6ZU65 1347 aa1.51□□□□□ -2.17
ITGB1-216ENST00000493758 IGLV10-54A0A075B6I4 117 aa1.51□□□□□ -2.17
ITGB1-216ENST00000493758 IGHV6-1A0A0B4J1U7 121 aa1.51□□□□□ -2.17
ITGB1-216ENST00000493758 TMEM72A0PK05 275 aa1.51□□□□□ -2.17
ITGB1-216ENST00000493758 KCNK2O95069 426 aa1.51□□□□□ -2.17
ITGB1-216ENST00000493758 IGKV1-39P01597 117 aa1.51□□□□□ -2.17
ITGB1-216ENST00000493758 IGKV1D-39P04432 117 aa1.51□□□□□ -2.17
ITGB1-216ENST00000493758 GABRG2P18507 467 aa1.51□□□□□ -2.17
ITGB1-216ENST00000493758 RAB9AP51151 201 aa1.51□□□□□ -2.17
ITGB1-216ENST00000493758 C21orf59P57076 290 aa1.51□□□□□ -2.17
ITGB1-216ENST00000493758 KRTAP12-1P59990 96 aa1.51□□□□□ -2.17
ITGB1-216ENST00000493758 PPP1CAP62136 330 aa1.51□□□□□ -2.17
ITGB1-216ENST00000493758 TSC22D1Q15714 1073 aa1.51□□□□□ -2.17
ITGB1-216ENST00000493758 KRTAP21-3Q3LHN1 58 aa1.51□□□□□ -2.17
ITGB1-216ENST00000493758 STEAP4Q687X5 459 aa1.51□□□□□ -2.17
ITGB1-216ENST00000493758 TMEM220Q6QAJ8 160 aa1.51□□□□□ -2.17
ITGB1-216ENST00000493758 FA2HQ7L5A8 372 aa1.51□□□□□ -2.17
ITGB1-216ENST00000493758 SNF8Q96H20 258 aa1.51□□□□□ -2.17
ITGB1-216ENST00000493758 GSDMAQ96QA5 445 aa1.51□□□□□ -2.17
ITGB1-216ENST00000493758 OR2V2Q96R30 315 aa1.51□□□□□ -2.17
ITGB1-216ENST00000493758 MS4A8Q9BY19 250 aa1.51□□□□□ -2.17
ITGB1-216ENST00000493758 ABCG5Q9H222 651 aa1.51□□□□□ -2.17
ITGB1-216ENST00000493758 DUSP21Q9H596 190 aa1.51□□□□□ -2.17
ITGB1-216ENST00000493758 GEMIN7Q9H840 131 aaKnown RBP1.51□□□□□ -2.17
ITGB1-216ENST00000493758 FANCEQ9HB96 536 aa1.51□□□□□ -2.17
ITGB1-216ENST00000493758 INIPQ9NRY2 104 aa1.51□□□□□ -2.17
ITGB1-216ENST00000493758 NLE1Q9NVX2 485 aaPredicted RBP1.51□□□□□ -2.17
ITGB1-216ENST00000493758 MCTS1Q9ULC4 181 aaKnown RBP1.51□□□□□ -2.17
ITGB1-216ENST00000493758 BAZ2AQ9UIF9 1905 aaKnown RBP1.5□□□□□ -2.17
ITGB1-216ENST00000493758 E7EQL1 145 aa1.5□□□□□ -2.17
ITGB1-216ENST00000493758 CACNG3O60359 315 aa1.5□□□□□ -2.17
ITGB1-216ENST00000493758 CD99P14209 185 aa1.5□□□□□ -2.17
ITGB1-216ENST00000493758 IL3RAP26951 378 aa1.5□□□□□ -2.17
ITGB1-216ENST00000493758 UQCRFS1P47985 274 aa1.5□□□□□ -2.17
ITGB1-216ENST00000493758 RAB7AP51149 207 aa1.5□□□□□ -2.17
ITGB1-216ENST00000493758 HMGN5P82970 282 aaKnown RBP1.5□□□□□ -2.17
ITGB1-216ENST00000493758 SLC9A3R2Q15599 337 aa1.5□□□□□ -2.17
ITGB1-216ENST00000493758 LINC00303Q3SY05 128 aa1.5□□□□□ -2.17
ITGB1-216ENST00000493758 KDM4DQ6B0I6 523 aa1.5□□□□□ -2.17
ITGB1-216ENST00000493758 PQLC3Q8N755 202 aa1.5□□□□□ -2.17
ITGB1-216ENST00000493758 ZFP62Q8NB50 900 aaPredicted RBP1.5□□□□□ -2.17
ITGB1-216ENST00000493758 RAB1CQ92928 201 aa1.5□□□□□ -2.17
ITGB1-216ENST00000493758 ZNF649Q9BS31 505 aa1.5□□□□□ -2.17
ITGB1-216ENST00000493758 FAM60AQ9NP50 221 aa1.5□□□□□ -2.17
ITGB1-216ENST00000493758 HEBP1Q9NRV9 189 aa1.5□□□□□ -2.17
ITGB1-216ENST00000493758 KIAA1671Q9BY89 1806 aa1.5□□□□□ -2.17
ITGB1-216ENST00000493758 LSM1O15116 133 aaKnown RBP1.49□□□□□ -2.17
ITGB1-216ENST00000493758 CCDC22O60826 627 aa1.49□□□□□ -2.17
ITGB1-216ENST00000493758 CDH16O75309 829 aa1.49□□□□□ -2.17
ITGB1-216ENST00000493758 FARS2O95363 451 aaKnown RBP1.49□□□□□ -2.17
ITGB1-216ENST00000493758 ERCC1P07992 297 aaPredicted RBP1.49□□□□□ -2.17
ITGB1-216ENST00000493758 OR5AC1P0C628 307 aa1.49□□□□□ -2.17
ITGB1-216ENST00000493758 HMOX2P30519 316 aa1.49□□□□□ -2.17
ITGB1-216ENST00000493758 NBL1P41271 181 aa1.49□□□□□ -2.17
ITGB1-216ENST00000493758 TFDP2Q14188 446 aa1.49□□□□□ -2.17
ITGB1-216ENST00000493758 ZNF141Q15928 474 aa1.49□□□□□ -2.17
ITGB1-216ENST00000493758 PYDC2Q56P42 97 aa1.49□□□□□ -2.17
ITGB1-216ENST00000493758 CPTPQ5TA50 214 aa1.49□□□□□ -2.17
ITGB1-216ENST00000493758 SSX9Q7RTT3 188 aa1.49□□□□□ -2.17
ITGB1-216ENST00000493758 OR52E5Q8NH55 327 aa1.49□□□□□ -2.17
ITGB1-216ENST00000493758 OR51F2Q8NH61 342 aa1.49□□□□□ -2.17
ITGB1-216ENST00000493758 MRPL48Q96GC5 212 aaKnown RBP1.49□□□□□ -2.17
ITGB1-216ENST00000493758 RDH12Q96NR8 316 aa1.49□□□□□ -2.17
ITGB1-216ENST00000493758 PEBP4Q96S96 227 aa1.49□□□□□ -2.17
ITGB1-216ENST00000493758 AGMATQ9BSE5 352 aa1.49□□□□□ -2.17
ITGB1-216ENST00000493758 KRTAP4-1Q9BYQ7 146 aa1.49□□□□□ -2.17
ITGB1-216ENST00000493758 RDH14Q9HBH5 336 aa1.49□□□□□ -2.17
ITGB1-216ENST00000493758 BEX1Q9HBH7 125 aa1.49□□□□□ -2.17
ITGB1-216ENST00000493758 PARP11Q9NR21 331 aa1.49□□□□□ -2.17
ITGB1-216ENST00000493758 CA10Q9NS85 328 aa1.49□□□□□ -2.17
ITGB1-216ENST00000493758 NMRK1Q9NWW6 199 aa1.49□□□□□ -2.17
ITGB1-216ENST00000493758 RAB22AQ9UL26 194 aa1.49□□□□□ -2.17
ITGB1-216ENST00000493758 ERCC6L2Q5T890 1561 aa1.48□□□□□ -2.17
ITGB1-216ENST00000493758 LINC01619G3V211 115 aa1.48□□□□□ -2.17
ITGB1-216ENST00000493758 BCKDKO14874 412 aa1.48□□□□□ -2.17
ITGB1-216ENST00000493758 PTHP01270 115 aa1.48□□□□□ -2.17
ITGB1-216ENST00000493758 AP1S2P56377 157 aa1.48□□□□□ -2.17
ITGB1-216ENST00000493758 MERTKQ12866 999 aa1.48□□□□□ -2.17
ITGB1-216ENST00000493758 HHATQ5VTY9 493 aa1.48□□□□□ -2.17
ITGB1-216ENST00000493758 ZNF660Q6AZW8 331 aaPredicted RBP1.48□□□□□ -2.17
ITGB1-216ENST00000493758 UNC93AQ86WB7 457 aa1.48□□□□□ -2.17
ITGB1-216ENST00000493758 LRRC8AQ8IWT6 810 aa1.48□□□□□ -2.17
ITGB1-216ENST00000493758 RPRMLQ8N4K4 120 aa1.48□□□□□ -2.17
ITGB1-216ENST00000493758 C8orf31Q8N9H6 132 aa1.48□□□□□ -2.17
ITGB1-216ENST00000493758 OR8K3Q8NH51 312 aa1.48□□□□□ -2.17
ITGB1-216ENST00000493758 ACTL9Q8TC94 416 aa1.48□□□□□ -2.17
ITGB1-216ENST00000493758 ASZ1Q8WWH4 475 aa1.48□□□□□ -2.17
ITGB1-216ENST00000493758 JSRP1Q96MG2 331 aaPredicted RBP1.48□□□□□ -2.17
ITGB1-216ENST00000493758 API5Q9BZZ5 524 aaKnown RBP1.48□□□□□ -2.17
ITGB1-216ENST00000493758 SND1-IT1Q9HBX3 110 aa1.48□□□□□ -2.17
ITGB1-216ENST00000493758 MRPS30Q9NP92 439 aaKnown RBP1.48□□□□□ -2.17
ITGB1-216ENST00000493758 STX18Q9P2W9 335 aaKnown RBP1.48□□□□□ -2.17
ITGB1-216ENST00000493758 AQP9O43315 295 aa1.47□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms