RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, human

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCM2-217	ENST00000492883	ARID1A	O14497	2285 aa		11.77	□□□□□ -0.52
CCM2-217	ENST00000492883	MAST4	O15021	2626 aa		11.77	□□□□□ -0.52
CCM2-217	ENST00000492883		A6NIN4	97 aa		11.77	□□□□□ -0.53
CCM2-217	ENST00000492883	PTGES3L	E9PB15	166 aa		11.77	□□□□□ -0.53
CCM2-217	ENST00000492883	ZNF205	O95201	554 aa		11.77	□□□□□ -0.53
CCM2-217	ENST00000492883	PTBP3	O95758	552 aa	Known RBP	11.77	□□□□□ -0.53
CCM2-217	ENST00000492883	NRAS	P01111	189 aa		11.77	□□□□□ -0.53
CCM2-217	ENST00000492883	PIP	P12273	146 aa	Predicted RBP	11.77	□□□□□ -0.53
CCM2-217	ENST00000492883	ZNF12	P17014	697 aa		11.77	□□□□□ -0.53
CCM2-217	ENST00000492883	CCL1	P22362	96 aa		11.77	□□□□□ -0.53
CCM2-217	ENST00000492883	MYF6	P23409	242 aa		11.77	□□□□□ -0.53
CCM2-217	ENST00000492883	GZMK	P49863	264 aa		11.77	□□□□□ -0.53
CCM2-217	ENST00000492883	CCR9	P51686	369 aa		11.77	□□□□□ -0.53
CCM2-217	ENST00000492883	CDH15	P55291	814 aa		11.77	□□□□□ -0.53
CCM2-217	ENST00000492883	NANOS3	P60323	173 aa	Known RBP	11.77	□□□□□ -0.53
CCM2-217	ENST00000492883	BTG1	P62324	171 aa		11.77	□□□□□ -0.53
CCM2-217	ENST00000492883	CEP78	Q5JTW2	689 aa		11.77	□□□□□ -0.53
CCM2-217	ENST00000492883	CLVS2	Q5SYC1	327 aa		11.77	□□□□□ -0.53
CCM2-217	ENST00000492883	OR2G6	Q5TZ20	316 aa		11.77	□□□□□ -0.53
CCM2-217	ENST00000492883	ZNF676	Q8N7Q3	588 aa		11.77	□□□□□ -0.53
CCM2-217	ENST00000492883	OR1M1	Q8NGA1	313 aa		11.77	□□□□□ -0.53
CCM2-217	ENST00000492883		Q8TCH9	128 aa		11.77	□□□□□ -0.53
CCM2-217	ENST00000492883	HAVCR2	Q8TDQ0	301 aa		11.77	□□□□□ -0.53
CCM2-217	ENST00000492883	RNF166	Q96A37	237 aa	Predicted RBP	11.77	□□□□□ -0.53
CCM2-217	ENST00000492883	ITPKC	Q96DU7	683 aa		11.77	□□□□□ -0.53
CCM2-217	ENST00000492883	GAL3ST1	Q99999	423 aa		11.77	□□□□□ -0.53
CCM2-217	ENST00000492883	ANKRD60	Q9BZ19	345 aa		11.77	□□□□□ -0.53
CCM2-217	ENST00000492883	C1orf123	Q9NWV4	160 aa		11.77	□□□□□ -0.53
CCM2-217	ENST00000492883	UBAP1	Q9NZ09	502 aa		11.77	□□□□□ -0.53
CCM2-217	ENST00000492883	RNF7	Q9UBF6	113 aa		11.77	□□□□□ -0.53
CCM2-217	ENST00000492883	CLEC2D	Q9UHP7	191 aa		11.77	□□□□□ -0.53
CCM2-217	ENST00000492883	PCDHB10	Q9UN67	800 aa		11.77	□□□□□ -0.53
CCM2-217	ENST00000492883	PPIAL4E	A0A075B759	164 aa		11.76	□□□□□ -0.53
CCM2-217	ENST00000492883	TRBV2	A0A0J9YWF9	115 aa		11.76	□□□□□ -0.53
CCM2-217	ENST00000492883	LOC107986453	A0A1B0GWG9	222 aa		11.76	□□□□□ -0.53
CCM2-217	ENST00000492883	hCG_1807616	A0A1W2PRN6	198 aa		11.76	□□□□□ -0.53
CCM2-217	ENST00000492883	DHRS7C	A6NNS2	312 aa		11.76	□□□□□ -0.53
CCM2-217	ENST00000492883		E9PI62	339 aa		11.76	□□□□□ -0.53
CCM2-217	ENST00000492883	PPIAL4D	F5H284	164 aa		11.76	□□□□□ -0.53
CCM2-217	ENST00000492883	ISG15	P05161	165 aa		11.76	□□□□□ -0.53
CCM2-217	ENST00000492883	PPIAL4F	P0DN26	164 aa		11.76	□□□□□ -0.53
CCM2-217	ENST00000492883	IGHV4-31	P0DP07	118 aa		11.76	□□□□□ -0.53
CCM2-217	ENST00000492883	IL2RG	P31785	369 aa		11.76	□□□□□ -0.53
CCM2-217	ENST00000492883	THBS2	P35442	1172 aa		11.76	□□□□□ -0.53
CCM2-217	ENST00000492883	CEACAM21	Q3KPI0	293 aa		11.76	□□□□□ -0.53
CCM2-217	ENST00000492883	DMRTC1	Q5HYR2	192 aa		11.76	□□□□□ -0.53
CCM2-217	ENST00000492883	PLCXD3	Q63HM9	321 aa		11.76	□□□□□ -0.53
CCM2-217	ENST00000492883		Q6ZSR3	168 aa		11.76	□□□□□ -0.53
CCM2-217	ENST00000492883	ZNF826P	Q6ZT77	177 aa		11.76	□□□□□ -0.53
CCM2-217	ENST00000492883	KRT74	Q7RTS7	529 aa		11.76	□□□□□ -0.53
CCM2-217	ENST00000492883	WDR86	Q86TI4	376 aa		11.76	□□□□□ -0.53
CCM2-217	ENST00000492883	LRRC28	Q86X40	367 aa	Predicted RBP	11.76	□□□□□ -0.53
CCM2-217	ENST00000492883	BOLL	Q8N9W6	283 aa	Known RBP	11.76	□□□□□ -0.53
CCM2-217	ENST00000492883	OR5A2	Q8NGI9	324 aa		11.76	□□□□□ -0.53
CCM2-217	ENST00000492883	CNBD2	Q96M20	576 aa		11.76	□□□□□ -0.53
CCM2-217	ENST00000492883	RAB26	Q9ULW5	256 aa		11.76	□□□□□ -0.53
CCM2-217	ENST00000492883	PPIAL4A	Q9Y536	164 aa		11.76	□□□□□ -0.53
CCM2-217	ENST00000492883	TMEM210	A6NLX4	147 aa		11.75	□□□□□ -0.53
CCM2-217	ENST00000492883	OR4C45	A6NMZ5	311 aa		11.75	□□□□□ -0.53
CCM2-217	ENST00000492883	ZNF732	B4DXR9	585 aa		11.75	□□□□□ -0.53
CCM2-217	ENST00000492883	CD5L	O43866	347 aa		11.75	□□□□□ -0.53
CCM2-217	ENST00000492883	SERPINA3	P01011	423 aa		11.75	□□□□□ -0.53
CCM2-217	ENST00000492883	IGHV2-70	P01814	119 aa		11.75	□□□□□ -0.53
CCM2-217	ENST00000492883	CCDC159	P0C7I6	412 aa		11.75	□□□□□ -0.53
CCM2-217	ENST00000492883	C21orf33	P30042	268 aa	Predicted RBP	11.75	□□□□□ -0.53
CCM2-217	ENST00000492883	MDH2	P40926	338 aa	Known RBP	11.75	□□□□□ -0.53
CCM2-217	ENST00000492883	TGM4	P49221	684 aa		11.75	□□□□□ -0.53
CCM2-217	ENST00000492883	GPM6A	P51674	278 aa		11.75	□□□□□ -0.53
CCM2-217	ENST00000492883	GTF2A1	P52655	376 aa	Predicted RBP	11.75	□□□□□ -0.53
CCM2-217	ENST00000492883	GNG3	P63215	75 aa		11.75	□□□□□ -0.53
CCM2-217	ENST00000492883	ZNF154	Q13106	437 aa		11.75	□□□□□ -0.53
CCM2-217	ENST00000492883	CCDC58	Q4VC31	144 aa		11.75	□□□□□ -0.53
CCM2-217	ENST00000492883	FAM201A	Q5SY85	155 aa		11.75	□□□□□ -0.53
CCM2-217	ENST00000492883	SPIC	Q8N5J4	248 aa		11.75	□□□□□ -0.53
CCM2-217	ENST00000492883	HPSE2	Q8WWQ2	592 aa		11.75	□□□□□ -0.53
CCM2-217	ENST00000492883	GATAD2B	Q8WXI9	593 aa		11.75	□□□□□ -0.53
CCM2-217	ENST00000492883	MYDGF	Q969H8	173 aa		11.75	□□□□□ -0.53
CCM2-217	ENST00000492883	RAB39B	Q96DA2	213 aa		11.75	□□□□□ -0.53
CCM2-217	ENST00000492883	MSI2	Q96DH6	328 aa	Known RBP	11.75	□□□□□ -0.53
CCM2-217	ENST00000492883	COMMD4	Q9H0A8	199 aa		11.75	□□□□□ -0.53
CCM2-217	ENST00000492883	ZNF665	Q9H7R5	613 aa		11.75	□□□□□ -0.53
CCM2-217	ENST00000492883	YAE1D1	Q9NRH1	226 aa		11.75	□□□□□ -0.53
CCM2-217	ENST00000492883	GPR173	Q9NS66	373 aa		11.75	□□□□□ -0.53
CCM2-217	ENST00000492883	BABAM2	Q9NXR7	383 aa		11.75	□□□□□ -0.53
CCM2-217	ENST00000492883	HHLA2	Q9UM44	414 aa		11.75	□□□□□ -0.53
CCM2-217	ENST00000492883	TPRKB	Q9Y3C4	175 aa		11.75	□□□□□ -0.53
CCM2-217	ENST00000492883	AKAP9	Q99996	3911 aa		11.75	□□□□□ -0.53
CCM2-217	ENST00000492883	ANKRD61	A6NGH8	418 aa		11.74	□□□□□ -0.53
CCM2-217	ENST00000492883	OR5B21	A6NL26	309 aa		11.74	□□□□□ -0.53
CCM2-217	ENST00000492883	TMEM212	A6NML5	194 aa		11.74	□□□□□ -0.53
CCM2-217	ENST00000492883	SLC1A7	O00341	560 aa		11.74	□□□□□ -0.53
CCM2-217	ENST00000492883	CDIPT	O14735	213 aa		11.74	□□□□□ -0.53
CCM2-217	ENST00000492883	LMX1B	O60663	402 aa		11.74	□□□□□ -0.53
CCM2-217	ENST00000492883	TGFA	P01135	160 aa		11.74	□□□□□ -0.53
CCM2-217	ENST00000492883	RPSA	P08865	295 aa	Known RBP	11.74	□□□□□ -0.53
CCM2-217	ENST00000492883	LMO4	P61968	165 aa		11.74	□□□□□ -0.53
CCM2-217	ENST00000492883	KRTAP1-1	Q07627	177 aa		11.74	□□□□□ -0.53
CCM2-217	ENST00000492883	ZMYND11	Q15326	602 aa		11.74	□□□□□ -0.53
CCM2-217	ENST00000492883	TMEM155	Q4W5P6	130 aa		11.74	□□□□□ -0.53
CCM2-217	ENST00000492883	TMEM42	Q69YG0	159 aa		11.74	□□□□□ -0.53

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