RNA–Protein interactions for RNA: ENST00000492626.5

SNX13-209, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,956 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-209ENST00000492626 CLDN18P56856 261 aa2.3□□□□□ -2.04
SNX13-209ENST00000492626 TFDP2Q14188 446 aa2.3□□□□□ -2.04
SNX13-209ENST00000492626 KCTD16Q68DU8 428 aa2.3□□□□□ -2.04
SNX13-209ENST00000492626 BAIAP2L2Q6UXY1 529 aa2.3□□□□□ -2.04
SNX13-209ENST00000492626 ABHD13Q7L211 337 aa2.3□□□□□ -2.04
SNX13-209ENST00000492626 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.3□□□□□ -2.04
SNX13-209ENST00000492626 KLHL30-AS1Q8NEE0 82 aa2.3□□□□□ -2.04
SNX13-209ENST00000492626 FBXL13Q8NEE6 735 aa2.3□□□□□ -2.04
SNX13-209ENST00000492626 ASB9Q96DX5 294 aa2.3□□□□□ -2.04
SNX13-209ENST00000492626 PAXXQ9BUH6 204 aa2.3□□□□□ -2.04
SNX13-209ENST00000492626 CHRNA10Q9GZZ6 450 aa2.3□□□□□ -2.04
SNX13-209ENST00000492626 OR51M1Q9H341 326 aa2.3□□□□□ -2.04
SNX13-209ENST00000492626 GNB4Q9HAV0 340 aa2.3□□□□□ -2.04
SNX13-209ENST00000492626 C15orf41Q9Y2V0 281 aa2.3□□□□□ -2.04
SNX13-209ENST00000492626 IGHV3-35A0A0C4DH35 117 aa2.3□□□□□ -2.04
SNX13-209ENST00000492626 C9J4A7 227 aa2.3□□□□□ -2.04
SNX13-209ENST00000492626 K7ERQ8 282 aa2.3□□□□□ -2.04
SNX13-209ENST00000492626 ZNF354AO60765 605 aaPredicted RBP2.3□□□□□ -2.04
SNX13-209ENST00000492626 ZNF780AO75290 641 aaPredicted RBP2.3□□□□□ -2.04
SNX13-209ENST00000492626 MMP23AO75900 390 aa2.3□□□□□ -2.04
SNX13-209ENST00000492626 RAB3DO95716 219 aa2.3□□□□□ -2.04
SNX13-209ENST00000492626 ARG1P05089 322 aa2.3□□□□□ -2.04
SNX13-209ENST00000492626 GKN3PP0CG01 181 aa2.3□□□□□ -2.04
SNX13-209ENST00000492626 SRMP19623 302 aa2.3□□□□□ -2.04
SNX13-209ENST00000492626 NUTF2P61970 127 aaKnown RBP2.3□□□□□ -2.04
SNX13-209ENST00000492626 PSMC5P62195 406 aa2.3□□□□□ -2.04
SNX13-209ENST00000492626 HDDC2Q7Z4H3 204 aa2.3□□□□□ -2.04
SNX13-209ENST00000492626 FAM220AQ7Z4H9 259 aa2.3□□□□□ -2.04
SNX13-209ENST00000492626 TRAM1L1Q8N609 369 aa2.3□□□□□ -2.04
SNX13-209ENST00000492626 OR2A1Q8NGT9 310 aa2.3□□□□□ -2.04
SNX13-209ENST00000492626 OR51E1Q8TCB6 317 aa2.3□□□□□ -2.04
SNX13-209ENST00000492626 MCOLN3Q8TDD5 553 aa2.3□□□□□ -2.04
SNX13-209ENST00000492626 RAB1CQ92928 201 aa2.3□□□□□ -2.04
SNX13-209ENST00000492626 ISOC2Q96AB3 205 aa2.3□□□□□ -2.04
SNX13-209ENST00000492626 CCDC124Q96CT7 223 aaKnown RBP2.3□□□□□ -2.04
SNX13-209ENST00000492626 RNF126Q9BV68 326 aa2.3□□□□□ -2.04
SNX13-209ENST00000492626 LAMA2P24043 3122 aaKnown RBP2.3□□□□□ -2.04
SNX13-209ENST00000492626 CHD5Q8TDI0 1954 aa2.29□□□□□ -2.04
SNX13-209ENST00000492626 C5orf63A6NC05 138 aa2.29□□□□□ -2.04
SNX13-209ENST00000492626 SYCE1LA8MT33 242 aa2.29□□□□□ -2.04
SNX13-209ENST00000492626 CCR8P51685 355 aa2.29□□□□□ -2.04
SNX13-209ENST00000492626 KRTAP10-9P60411 292 aa2.29□□□□□ -2.04
SNX13-209ENST00000492626 ELF3P78545 371 aaPredicted RBP2.29□□□□□ -2.04
SNX13-209ENST00000492626 QPRTQ15274 297 aa2.29□□□□□ -2.04
SNX13-209ENST00000492626 TTMPQ5BVD1 217 aa2.29□□□□□ -2.04
SNX13-209ENST00000492626 LY6G6FQ5SQ64 297 aa2.29□□□□□ -2.04
SNX13-209ENST00000492626 CYB5R2Q6BCY4 276 aa2.29□□□□□ -2.04
SNX13-209ENST00000492626 RWDD4Q6NW29 188 aaKnown RBP2.29□□□□□ -2.04
SNX13-209ENST00000492626 Q6ZTC4 211 aa2.29□□□□□ -2.04
SNX13-209ENST00000492626 P2RY8Q86VZ1 359 aa2.29□□□□□ -2.04
SNX13-209ENST00000492626 HORMAD1Q86X24 394 aa2.29□□□□□ -2.04
SNX13-209ENST00000492626 ZNF677Q86XU0 584 aa2.29□□□□□ -2.04
SNX13-209ENST00000492626 APRG1Q8IVJ8 170 aa2.29□□□□□ -2.04
SNX13-209ENST00000492626 CSGALNACT2Q8N6G5 542 aa2.29□□□□□ -2.04
SNX13-209ENST00000492626 CD177Q8N6Q3 437 aa2.29□□□□□ -2.04
SNX13-209ENST00000492626 OR10G9Q8NGN4 311 aa2.29□□□□□ -2.04
SNX13-209ENST00000492626 OR2G3Q8NGZ4 309 aa2.29□□□□□ -2.04
SNX13-209ENST00000492626 ZNF596Q8TC21 504 aa2.29□□□□□ -2.04
SNX13-209ENST00000492626 CD300LFQ8TDQ1 290 aa2.29□□□□□ -2.04
SNX13-209ENST00000492626 APH1BQ8WW43 257 aa2.29□□□□□ -2.04
SNX13-209ENST00000492626 ARPC1AQ92747 370 aa2.29□□□□□ -2.04
SNX13-209ENST00000492626 ZFP3Q96NJ6 502 aa2.29□□□□□ -2.04
SNX13-209ENST00000492626 PLEKHF2Q9H8W4 249 aa2.29□□□□□ -2.04
SNX13-209ENST00000492626 HECTD1Q9ULT8 2610 aa2.29□□□□□ -2.04
SNX13-209ENST00000492626 FBN1P35555 2871 aaKnown RBP2.29□□□□□ -2.04
SNX13-209ENST00000492626 MYH11P35749 1972 aa2.29□□□□□ -2.04
SNX13-209ENST00000492626 NMT2O60551 498 aa2.29□□□□□ -2.04
SNX13-209ENST00000492626 ETHE1O95571 254 aa2.29□□□□□ -2.04
SNX13-209ENST00000492626 HBE1P02100 147 aa2.29□□□□□ -2.04
SNX13-209ENST00000492626 CCNG1P51959 295 aa2.29□□□□□ -2.04
SNX13-209ENST00000492626 PPIDQ08752 370 aaKnown RBP2.29□□□□□ -2.04
SNX13-209ENST00000492626 CASP8Q14790 479 aa2.29□□□□□ -2.04
SNX13-209ENST00000492626 TPRG1LQ5T0D9 272 aa2.29□□□□□ -2.04
SNX13-209ENST00000492626 LCN12Q6JVE5 192 aa2.29□□□□□ -2.04
SNX13-209ENST00000492626 ERICH5Q6P6B1 374 aa2.29□□□□□ -2.04
SNX13-209ENST00000492626 GTSCR1Q86UQ5 136 aa2.29□□□□□ -2.04
SNX13-209ENST00000492626 UNC93AQ86WB7 457 aa2.29□□□□□ -2.04
SNX13-209ENST00000492626 VKORC1L1Q8N0U8 176 aa2.29□□□□□ -2.04
SNX13-209ENST00000492626 OR51L1Q8NGJ5 315 aa2.29□□□□□ -2.04
SNX13-209ENST00000492626 CCDC12Q8WUD4 166 aaPredicted RBP2.29□□□□□ -2.04
SNX13-209ENST00000492626 ASZ1Q8WWH4 475 aa2.29□□□□□ -2.04
SNX13-209ENST00000492626 TEX15Q9BXT5 2789 aa2.29□□□□□ -2.04
SNX13-209ENST00000492626 PRELID1Q9Y255 219 aa2.29□□□□□ -2.04
SNX13-209ENST00000492626 YARS2Q9Y2Z4 477 aaKnown RBP2.29□□□□□ -2.04
SNX13-209ENST00000492626 CDH10Q9Y6N8 788 aa2.29□□□□□ -2.04
SNX13-209ENST00000492626 APC2O95996 2303 aa2.29□□□□□ -2.04
SNX13-209ENST00000492626 DNAH1Q9P2D7 4330 aa2.29□□□□□ -2.04
SNX13-209ENST00000492626 IGKV1D-8A0A087WSZ0 117 aa2.29□□□□□ -2.04
SNX13-209ENST00000492626 TRAV39A0A0B4J263 110 aa2.29□□□□□ -2.04
SNX13-209ENST00000492626 FAM166BA8MTA8 275 aa2.29□□□□□ -2.04
SNX13-209ENST00000492626 HSBP1L1C9JCN9 74 aa2.29□□□□□ -2.04
SNX13-209ENST00000492626 LCA5LO95447 670 aa2.29□□□□□ -2.04
SNX13-209ENST00000492626 CPN2P22792 545 aa2.29□□□□□ -2.04
SNX13-209ENST00000492626 MT3P25713 68 aa2.29□□□□□ -2.04
SNX13-209ENST00000492626 ARL2P36404 184 aa2.29□□□□□ -2.04
SNX13-209ENST00000492626 CCL7P80098 99 aa2.29□□□□□ -2.04
SNX13-209ENST00000492626 AQP6Q13520 282 aa2.29□□□□□ -2.04
SNX13-209ENST00000492626 VAMP3Q15836 100 aa2.29□□□□□ -2.04
SNX13-209ENST00000492626 C6orf52Q5T4I8 152 aa2.29□□□□□ -2.04
SNX13-209ENST00000492626 LCE1DQ5T752 114 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms