RNA–Protein interactions for RNA: ENST00000492150.1

CACNA1C-228, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2

Gene CACNA1C, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-228ENST00000492150 WDR13Q9H1Z4 485 aa9.47□□□□□ -0.89
CACNA1C-228ENST00000492150 OPA3Q9H6K4 179 aa9.47□□□□□ -0.89
CACNA1C-228ENST00000492150 METTL8Q9H825 291 aaKnown RBP9.47□□□□□ -0.89
CACNA1C-228ENST00000492150 SNTG1Q9NSN8 517 aa9.47□□□□□ -0.89
CACNA1C-228ENST00000492150 HAO2Q9NYQ3 351 aa9.47□□□□□ -0.89
CACNA1C-228ENST00000492150 AP3M1Q9Y2T2 418 aa9.47□□□□□ -0.89
CACNA1C-228ENST00000492150 N6AMT1Q9Y5N5 214 aa9.47□□□□□ -0.89
CACNA1C-228ENST00000492150 CAPN7Q9Y6W3 813 aa9.47□□□□□ -0.89
CACNA1C-228ENST00000492150 ABCA13Q86UQ4 5058 aa9.46□□□□□ -0.89
CACNA1C-228ENST00000492150 NME4O00746 187 aa9.46□□□□□ -0.9
CACNA1C-228ENST00000492150 XRCC2O43543 280 aa9.46□□□□□ -0.9
CACNA1C-228ENST00000492150 IDH3BO43837 385 aa9.46□□□□□ -0.9
CACNA1C-228ENST00000492150 FBXO24O75426 580 aa9.46□□□□□ -0.9
CACNA1C-228ENST00000492150 NCK1P16333 377 aa9.46□□□□□ -0.9
CACNA1C-228ENST00000492150 ZNF823P16415 610 aa9.46□□□□□ -0.9
CACNA1C-228ENST00000492150 GSK3BP49841 420 aa9.46□□□□□ -0.9
CACNA1C-228ENST00000492150 GMFBP60983 142 aa9.46□□□□□ -0.9
CACNA1C-228ENST00000492150 MXRA7P84157 204 aa9.46□□□□□ -0.9
CACNA1C-228ENST00000492150 AANATQ16613 207 aa9.46□□□□□ -0.9
CACNA1C-228ENST00000492150 DGUOKQ16854 277 aa9.46□□□□□ -0.9
CACNA1C-228ENST00000492150 SLC16A9Q7RTY1 509 aa9.46□□□□□ -0.9
CACNA1C-228ENST00000492150 DCXRQ7Z4W1 244 aa9.46□□□□□ -0.9
CACNA1C-228ENST00000492150 ZDHHC21Q8IVQ6 265 aa9.46□□□□□ -0.9
CACNA1C-228ENST00000492150 OR51G2Q8NGK0 314 aa9.46□□□□□ -0.9
CACNA1C-228ENST00000492150 ANGPTL6Q8NI99 470 aa9.46□□□□□ -0.9
CACNA1C-228ENST00000492150 WIPF2Q8TF74 440 aaPredicted RBP9.46□□□□□ -0.9
CACNA1C-228ENST00000492150 GATAD1Q8WUU5 269 aa9.46□□□□□ -0.9
CACNA1C-228ENST00000492150 DUS3LQ96G46 650 aaKnown RBP9.46□□□□□ -0.9
CACNA1C-228ENST00000492150 RAB3IPQ96QF0 476 aaPredicted RBP9.46□□□□□ -0.9
CACNA1C-228ENST00000492150 KCNJ15Q99712 375 aa9.46□□□□□ -0.9
CACNA1C-228ENST00000492150 COPS4Q9BT78 406 aa9.46□□□□□ -0.9
CACNA1C-228ENST00000492150 GPR61Q9BZJ8 451 aa9.46□□□□□ -0.9
CACNA1C-228ENST00000492150 NSRP1Q9H0G5 558 aaKnown RBP9.46□□□□□ -0.9
CACNA1C-228ENST00000492150 DNTTIP1Q9H147 329 aa9.46□□□□□ -0.9
CACNA1C-228ENST00000492150 ZNF702PQ9H963 129 aa9.46□□□□□ -0.9
CACNA1C-228ENST00000492150 RAB18Q9NP72 206 aa9.46□□□□□ -0.9
CACNA1C-228ENST00000492150 SERTAD4Q9NUC0 356 aa9.46□□□□□ -0.9
CACNA1C-228ENST00000492150 MRGBPQ9NV56 204 aa9.46□□□□□ -0.9
CACNA1C-228ENST00000492150 SLC25A10Q9UBX3 287 aaPredicted RBP9.46□□□□□ -0.9
CACNA1C-228ENST00000492150 ZNF391Q9UJN7 358 aa9.46□□□□□ -0.9
CACNA1C-228ENST00000492150 SF3B6Q9Y3B4 125 aaKnown RBP9.46□□□□□ -0.9
CACNA1C-228ENST00000492150 FAM32AQ9Y421 112 aaKnown RBP9.46□□□□□ -0.9
CACNA1C-228ENST00000492150 TIPRLO75663 272 aa9.45□□□□□ -0.9
CACNA1C-228ENST00000492150 BMXP51813 675 aa9.45□□□□□ -0.9
CACNA1C-228ENST00000492150 SLC7A2P52569 658 aa9.45□□□□□ -0.9
CACNA1C-228ENST00000492150 CAV3P56539 151 aa9.45□□□□□ -0.9
CACNA1C-228ENST00000492150 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.45□□□□□ -0.9
CACNA1C-228ENST00000492150 SF3A3Q12874 501 aaKnown RBP eCLIP9.45□□□□□ -0.9
CACNA1C-228ENST00000492150 HABP2Q14520 560 aaPredicted RBP9.45□□□□□ -0.9
CACNA1C-228ENST00000492150 KLHL12Q53G59 568 aa9.45□□□□□ -0.9
CACNA1C-228ENST00000492150 SLC35F1Q5T1Q4 408 aa9.45□□□□□ -0.9
CACNA1C-228ENST00000492150 ZBTB37Q5TC79 503 aa9.45□□□□□ -0.9
CACNA1C-228ENST00000492150 ZFAND6Q6FIF0 208 aa9.45□□□□□ -0.9
CACNA1C-228ENST00000492150 ARPINQ7Z6K5 226 aa9.45□□□□□ -0.9
CACNA1C-228ENST00000492150 OR10Z1Q8NGY1 313 aa9.45□□□□□ -0.9
CACNA1C-228ENST00000492150 DPF1Q92782 380 aa9.45□□□□□ -0.9
CACNA1C-228ENST00000492150 FAM162AQ96A26 154 aa9.45□□□□□ -0.9
CACNA1C-228ENST00000492150 SGK3Q96BR1 496 aa9.45□□□□□ -0.9
CACNA1C-228ENST00000492150 SLAMF6Q96DU3 332 aa9.45□□□□□ -0.9
CACNA1C-228ENST00000492150 MED30Q96HR3 178 aa9.45□□□□□ -0.9
CACNA1C-228ENST00000492150 NPFFR1Q9GZQ6 430 aa9.45□□□□□ -0.9
CACNA1C-228ENST00000492150 ELL3Q9HB65 397 aaPredicted RBP9.45□□□□□ -0.9
CACNA1C-228ENST00000492150 KRCC1Q9NPI7 259 aaPredicted RBP9.45□□□□□ -0.9
CACNA1C-228ENST00000492150 CENPMQ9NSP4 180 aa9.45□□□□□ -0.9
CACNA1C-228ENST00000492150 RHBDD3Q9Y3P4 386 aa9.45□□□□□ -0.9
CACNA1C-228ENST00000492150 hCG_38984A0A1B0GV85 526 aa9.44□□□□□ -0.9
CACNA1C-228ENST00000492150 A0A1W2PQ09 198 aa9.44□□□□□ -0.9
CACNA1C-228ENST00000492150 NKX6-3A6NJ46 265 aa9.44□□□□□ -0.9
CACNA1C-228ENST00000492150 SIGLEC5O15389 551 aa9.44□□□□□ -0.9
CACNA1C-228ENST00000492150 TBX1O43435 398 aa9.44□□□□□ -0.9
CACNA1C-228ENST00000492150 ACAA1P09110 424 aaPredicted RBP9.44□□□□□ -0.9
CACNA1C-228ENST00000492150 NDUFB7P17568 137 aa9.44□□□□□ -0.9
CACNA1C-228ENST00000492150 POU1F1P28069 291 aa9.44□□□□□ -0.9
CACNA1C-228ENST00000492150 BLMHQ13867 455 aa9.44□□□□□ -0.9
CACNA1C-228ENST00000492150 TAF13Q15543 124 aa9.44□□□□□ -0.9
CACNA1C-228ENST00000492150 TCTEX1D4Q5JR98 221 aa9.44□□□□□ -0.9
CACNA1C-228ENST00000492150 C8orf82Q6P1X6 216 aaPredicted RBP9.44□□□□□ -0.9
CACNA1C-228ENST00000492150 Q8N2B8 174 aa9.44□□□□□ -0.9
CACNA1C-228ENST00000492150 FAM86B1Q8N7N1 296 aa9.44□□□□□ -0.9
CACNA1C-228ENST00000492150 CYB561A3Q8NBI2 242 aa9.44□□□□□ -0.9
CACNA1C-228ENST00000492150 PROKR2Q8NFJ6 384 aa9.44□□□□□ -0.9
CACNA1C-228ENST00000492150 OR51L1Q8NGJ5 315 aa9.44□□□□□ -0.9
CACNA1C-228ENST00000492150 OR5D13Q8NGL4 314 aa9.44□□□□□ -0.9
CACNA1C-228ENST00000492150 OR4C15Q8NGM1 316 aa9.44□□□□□ -0.9
CACNA1C-228ENST00000492150 RPL3LQ92901 407 aaKnown RBP9.44□□□□□ -0.9
CACNA1C-228ENST00000492150 REEP6Q96HR9 211 aa9.44□□□□□ -0.9
CACNA1C-228ENST00000492150 NKX3-1Q99801 234 aaPredicted RBP9.44□□□□□ -0.9
CACNA1C-228ENST00000492150 CITED2Q99967 270 aaPredicted RBP9.44□□□□□ -0.9
CACNA1C-228ENST00000492150 FGF23Q9GZV9 251 aaPredicted RBP9.44□□□□□ -0.9
CACNA1C-228ENST00000492150 COMMD3-BMI1R4GMX3 469 aa9.44□□□□□ -0.9
CACNA1C-228ENST00000492150 PLECQ15149 4684 aaKnown RBP9.43□□□□□ -0.9
CACNA1C-228ENST00000492150 H0YAE9 185 aa9.43□□□□□ -0.9
CACNA1C-228ENST00000492150 AKR7A2O43488 359 aa9.43□□□□□ -0.9
CACNA1C-228ENST00000492150 HOXD3P31249 432 aaPredicted RBP9.43□□□□□ -0.9
CACNA1C-228ENST00000492150 GSSP48637 474 aa9.43□□□□□ -0.9
CACNA1C-228ENST00000492150 CX3CR1P49238 355 aa9.43□□□□□ -0.9
CACNA1C-228ENST00000492150 GSK3AP49840 483 aa9.43□□□□□ -0.9
CACNA1C-228ENST00000492150 TIGD6Q17RP2 521 aa9.43□□□□□ -0.9
CACNA1C-228ENST00000492150 CGB2Q6NT52 195 aa9.43□□□□□ -0.9
CACNA1C-228ENST00000492150 LIAT1Q6ZQX7 453 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms