RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 DUX4L7P0CJ90 424 aa6.89□□□□□ -1.31
SMARCB1-207ENST00000491967 PRR23D2P0DMB1 279 aaPredicted RBP6.89□□□□□ -1.31
SMARCB1-207ENST00000491967 ANXA8P13928 327 aa6.89□□□□□ -1.31
SMARCB1-207ENST00000491967 PAICSP22234 425 aaKnown RBP6.89□□□□□ -1.31
SMARCB1-207ENST00000491967 HSD11B1P28845 292 aa6.89□□□□□ -1.31
SMARCB1-207ENST00000491967 NAA10P41227 235 aaPredicted RBP6.89□□□□□ -1.31
SMARCB1-207ENST00000491967 PSMA6P60900 246 aaKnown RBP6.89□□□□□ -1.31
SMARCB1-207ENST00000491967 ARF6P62330 175 aa6.89□□□□□ -1.31
SMARCB1-207ENST00000491967 ELF3P78545 371 aaPredicted RBP6.89□□□□□ -1.31
SMARCB1-207ENST00000491967 TIGD6Q17RP2 521 aa6.89□□□□□ -1.31
SMARCB1-207ENST00000491967 WDR38Q5JTN6 314 aa6.89□□□□□ -1.31
SMARCB1-207ENST00000491967 METTL11BQ5VVY1 283 aa6.89□□□□□ -1.31
SMARCB1-207ENST00000491967 RUSC1-AS1Q66K80 236 aa6.89□□□□□ -1.31
SMARCB1-207ENST00000491967 PLBD1Q6P4A8 553 aa6.89□□□□□ -1.31
SMARCB1-207ENST00000491967 DUX4L9Q6RFH8 374 aaPredicted RBP6.89□□□□□ -1.31
SMARCB1-207ENST00000491967 ZNF788Q6ZQV5 615 aa6.89□□□□□ -1.31
SMARCB1-207ENST00000491967 Q6ZSR3 168 aa6.89□□□□□ -1.31
SMARCB1-207ENST00000491967 SLC36A1Q7Z2H8 476 aa6.89□□□□□ -1.31
SMARCB1-207ENST00000491967 CPOQ8IVL8 374 aa6.89□□□□□ -1.31
SMARCB1-207ENST00000491967 HS3ST5Q8IZT8 346 aa6.89□□□□□ -1.31
SMARCB1-207ENST00000491967 FGFRL1Q8N441 504 aa6.89□□□□□ -1.31
SMARCB1-207ENST00000491967 FTMTQ8N4E7 242 aa6.89□□□□□ -1.31
SMARCB1-207ENST00000491967 Q8N7P7 452 aa6.89□□□□□ -1.31
SMARCB1-207ENST00000491967 BOLLQ8N9W6 283 aaKnown RBP6.89□□□□□ -1.31
SMARCB1-207ENST00000491967 SCCPDHQ8NBX0 429 aa6.89□□□□□ -1.31
SMARCB1-207ENST00000491967 CCDC197Q8NCU1 140 aa6.89□□□□□ -1.31
SMARCB1-207ENST00000491967 OR8S1Q8NH09 359 aa6.89□□□□□ -1.31
SMARCB1-207ENST00000491967 ANGPTL6Q8NI99 470 aa6.89□□□□□ -1.31
SMARCB1-207ENST00000491967 HPSE2Q8WWQ2 592 aa6.89□□□□□ -1.31
SMARCB1-207ENST00000491967 WFDC12Q8WWY7 111 aa6.89□□□□□ -1.31
SMARCB1-207ENST00000491967 DYRK2Q92630 601 aa6.89□□□□□ -1.31
SMARCB1-207ENST00000491967 ZDHHC16Q969W1 377 aa6.89□□□□□ -1.31
SMARCB1-207ENST00000491967 SEH1LQ96EE3 360 aa6.89□□□□□ -1.31
SMARCB1-207ENST00000491967 NRBF2Q96F24 287 aa6.89□□□□□ -1.31
SMARCB1-207ENST00000491967 CCL13Q99616 98 aa6.89□□□□□ -1.31
SMARCB1-207ENST00000491967 DCTN5Q9BTE1 182 aa6.89□□□□□ -1.31
SMARCB1-207ENST00000491967 YIPF3Q9GZM5 350 aa6.89□□□□□ -1.31
SMARCB1-207ENST00000491967 WDR13Q9H1Z4 485 aa6.89□□□□□ -1.31
SMARCB1-207ENST00000491967 OR51V1Q9H2C8 321 aa6.89□□□□□ -1.31
SMARCB1-207ENST00000491967 OR51I2Q9H344 312 aa6.89□□□□□ -1.31
SMARCB1-207ENST00000491967 FAM206AQ9NX38 181 aa6.89□□□□□ -1.31
SMARCB1-207ENST00000491967 HAO2Q9NYQ3 351 aa6.89□□□□□ -1.31
SMARCB1-207ENST00000491967 PDP1Q9P0J1 537 aaPredicted RBP6.89□□□□□ -1.31
SMARCB1-207ENST00000491967 KIF17Q9P2E2 1029 aa6.89□□□□□ -1.31
SMARCB1-207ENST00000491967 DNAJB9Q9UBS3 223 aa6.89□□□□□ -1.31
SMARCB1-207ENST00000491967 DUX4Q9UBX2 424 aa6.89□□□□□ -1.31
SMARCB1-207ENST00000491967 DSCAML1Q8TD84 2053 aa6.89□□□□□ -1.31
SMARCB1-207ENST00000491967 IGHV3OR15-7A0A075B7D8 119 aa6.88□□□□□ -1.31
SMARCB1-207ENST00000491967 A0A0U1RQK1 487 aa6.88□□□□□ -1.31
SMARCB1-207ENST00000491967 A0A1B0GVI7 797 aa6.88□□□□□ -1.31
SMARCB1-207ENST00000491967 hCG_1807616A0A1W2PRN6 198 aa6.88□□□□□ -1.31
SMARCB1-207ENST00000491967 CLPSL1A2RUU4 121 aa6.88□□□□□ -1.31
SMARCB1-207ENST00000491967 CCDC182A6NF36 153 aa6.88□□□□□ -1.31
SMARCB1-207ENST00000491967 ANXA2P2A6NMY6 339 aa6.88□□□□□ -1.31
SMARCB1-207ENST00000491967 PRR32B1ATL7 298 aa6.88□□□□□ -1.31
SMARCB1-207ENST00000491967 KCNAB3O43448 404 aa6.88□□□□□ -1.31
SMARCB1-207ENST00000491967 E2F6O75461 281 aa6.88□□□□□ -1.31
SMARCB1-207ENST00000491967 SRSF10O75494 262 aaKnown RBP6.88□□□□□ -1.31
SMARCB1-207ENST00000491967 CLPXO76031 633 aa6.88□□□□□ -1.31
SMARCB1-207ENST00000491967 ACAA1P09110 424 aaPredicted RBP6.88□□□□□ -1.31
SMARCB1-207ENST00000491967 ATP6V1B1P15313 513 aa6.88□□□□□ -1.31
SMARCB1-207ENST00000491967 PRKACGP22612 351 aa6.88□□□□□ -1.31
SMARCB1-207ENST00000491967 RAG2P55895 527 aa6.88□□□□□ -1.31
SMARCB1-207ENST00000491967 CAV3P56539 151 aa6.88□□□□□ -1.31
SMARCB1-207ENST00000491967 POU4F2Q12837 409 aa6.88□□□□□ -1.31
SMARCB1-207ENST00000491967 PRDX4Q13162 271 aa6.88□□□□□ -1.31
SMARCB1-207ENST00000491967 CEACAM21Q3KPI0 293 aa6.88□□□□□ -1.31
SMARCB1-207ENST00000491967 ZBTB37Q5TC79 503 aa6.88□□□□□ -1.31
SMARCB1-207ENST00000491967 OLFML2AQ68BL7 652 aa6.88□□□□□ -1.31
SMARCB1-207ENST00000491967 FAHD1Q6P587 224 aa6.88□□□□□ -1.31
SMARCB1-207ENST00000491967 FIP1L1Q6UN15 594 aaKnown RBP6.88□□□□□ -1.31
SMARCB1-207ENST00000491967 TREML4Q6UXN2 200 aa6.88□□□□□ -1.31
SMARCB1-207ENST00000491967 TRPM8Q7Z2W7 1104 aa6.88□□□□□ -1.31
SMARCB1-207ENST00000491967 FAM216BQ8N7L0 139 aa6.88□□□□□ -1.31
SMARCB1-207ENST00000491967 ZSCAN4Q8NAM6 433 aaPredicted RBP6.88□□□□□ -1.31
SMARCB1-207ENST00000491967 BBS1Q8NFJ9 593 aa6.88□□□□□ -1.31
SMARCB1-207ENST00000491967 OR8B12Q8NGG6 310 aa6.88□□□□□ -1.31
SMARCB1-207ENST00000491967 OR4F5Q8NH21 305 aa6.88□□□□□ -1.31
SMARCB1-207ENST00000491967 TBC1D15Q8TC07 691 aa6.88□□□□□ -1.31
SMARCB1-207ENST00000491967 THEM6Q8WUY1 208 aa6.88□□□□□ -1.31
SMARCB1-207ENST00000491967 DNAJC9Q8WXX5 260 aa6.88□□□□□ -1.31
SMARCB1-207ENST00000491967 UTP4Q969X6 686 aaKnown RBP6.88□□□□□ -1.31
SMARCB1-207ENST00000491967 CCDC124Q96CT7 223 aaKnown RBP6.88□□□□□ -1.31
SMARCB1-207ENST00000491967 SLC7A6OSQ96CW6 309 aaPredicted RBP6.88□□□□□ -1.31
SMARCB1-207ENST00000491967 MED30Q96HR3 178 aa6.88□□□□□ -1.31
SMARCB1-207ENST00000491967 AJUBAQ96IF1 538 aa6.88□□□□□ -1.31
SMARCB1-207ENST00000491967 LRGUKQ96M69 825 aa6.88□□□□□ -1.31
SMARCB1-207ENST00000491967 TEAD3Q99594 435 aa6.88□□□□□ -1.31
SMARCB1-207ENST00000491967 PKP2Q99959 881 aa6.88□□□□□ -1.31
SMARCB1-207ENST00000491967 MICU1Q9BPX6 476 aa6.88□□□□□ -1.31
SMARCB1-207ENST00000491967 THTPAQ9BU02 230 aa6.88□□□□□ -1.31
SMARCB1-207ENST00000491967 RTL8AQ9BWD3 113 aa6.88□□□□□ -1.31
SMARCB1-207ENST00000491967 PAPOLGQ9BWT3 736 aaKnown RBP6.88□□□□□ -1.31
SMARCB1-207ENST00000491967 BEX1Q9HBH7 125 aa6.88□□□□□ -1.31
SMARCB1-207ENST00000491967 FAM53CQ9NYF3 392 aa6.88□□□□□ -1.31
SMARCB1-207ENST00000491967 ZNF222Q9UK12 451 aa6.88□□□□□ -1.31
SMARCB1-207ENST00000491967 LRP12Q9Y561 859 aa6.88□□□□□ -1.31
SMARCB1-207ENST00000491967 N6AMT1Q9Y5N5 214 aa6.88□□□□□ -1.31
SMARCB1-207ENST00000491967 TGP01266 2768 aa6.87□□□□□ -1.31
SMARCB1-207ENST00000491967 IGKV1D-17A0A075B6S4 117 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms