RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 FAM240AA0A1B0GVK7 77 aa2.71□□□□□ -1.98
XRN1-213ENST00000489241 C5orf63A6NC05 138 aa2.71□□□□□ -1.98
XRN1-213ENST00000489241 IQCF5A8MTL0 148 aa2.71□□□□□ -1.98
XRN1-213ENST00000489241 BPY2O14599 106 aa2.71□□□□□ -1.98
XRN1-213ENST00000489241 ZNF207O43670 478 aaKnown RBP2.71□□□□□ -1.98
XRN1-213ENST00000489241 APCSP02743 223 aa2.71□□□□□ -1.98
XRN1-213ENST00000489241 OR5AL1P0C617 328 aa2.71□□□□□ -1.98
XRN1-213ENST00000489241 CD9P21926 228 aa2.71□□□□□ -1.98
XRN1-213ENST00000489241 IL12BP29460 328 aa2.71□□□□□ -1.98
XRN1-213ENST00000489241 RPS9P46781 194 aaKnown RBP2.71□□□□□ -1.98
XRN1-213ENST00000489241 MTPNP58546 118 aa2.71□□□□□ -1.98
XRN1-213ENST00000489241 USF2Q15853 346 aaPredicted RBP2.71□□□□□ -1.98
XRN1-213ENST00000489241 PRSS8Q16651 343 aa2.71□□□□□ -1.98
XRN1-213ENST00000489241 UBE2SQ16763 222 aa2.71□□□□□ -1.98
XRN1-213ENST00000489241 C6orf99Q4VX62 202 aa2.71□□□□□ -1.98
XRN1-213ENST00000489241 ACTL10Q5JWF8 245 aa2.71□□□□□ -1.98
XRN1-213ENST00000489241 SAXO2Q658L1 398 aa2.71□□□□□ -1.98
XRN1-213ENST00000489241 WDR86Q86TI4 376 aa2.71□□□□□ -1.98
XRN1-213ENST00000489241 CYB561D1Q8N8Q1 229 aa2.71□□□□□ -1.98
XRN1-213ENST00000489241 CDRT4Q8N9R6 151 aa2.71□□□□□ -1.98
XRN1-213ENST00000489241 OR4K5Q8NGD3 323 aa2.71□□□□□ -1.98
XRN1-213ENST00000489241 ING5Q8WYH8 240 aa2.71□□□□□ -1.98
XRN1-213ENST00000489241 CCDC124Q96CT7 223 aaKnown RBP2.71□□□□□ -1.98
XRN1-213ENST00000489241 NEURL3Q96EH8 262 aa2.71□□□□□ -1.98
XRN1-213ENST00000489241 SMARCD1Q96GM5 515 aa2.71□□□□□ -1.98
XRN1-213ENST00000489241 ADTRPQ96IZ2 230 aa2.71□□□□□ -1.98
XRN1-213ENST00000489241 ZNF382Q96SR6 550 aa2.71□□□□□ -1.98
XRN1-213ENST00000489241 RBBP8Q99708 897 aa2.71□□□□□ -1.98
XRN1-213ENST00000489241 BEX2Q9BXY8 128 aa2.71□□□□□ -1.98
XRN1-213ENST00000489241 SLC17A9Q9BYT1 436 aa2.71□□□□□ -1.98
XRN1-213ENST00000489241 C6orf50Q9HD87 102 aa2.71□□□□□ -1.98
XRN1-213ENST00000489241 NECAP2Q9NVZ3 263 aa2.71□□□□□ -1.98
XRN1-213ENST00000489241 SDHAF2Q9NX18 166 aa2.71□□□□□ -1.98
XRN1-213ENST00000489241 PRO0461Q9UI25 63 aa2.71□□□□□ -1.98
XRN1-213ENST00000489241 MRM2Q9UI43 246 aaKnown RBP2.71□□□□□ -1.98
XRN1-213ENST00000489241 GMEB1Q9Y692 573 aa2.71□□□□□ -1.98
XRN1-213ENST00000489241 ZNF608Q9ULD9 1512 aaPredicted RBP2.71□□□□□ -1.98
XRN1-213ENST00000489241 TNS2Q63HR2 1409 aa2.7□□□□□ -1.98
XRN1-213ENST00000489241 TRAV8-4A0A0B4J246 113 aa2.7□□□□□ -1.98
XRN1-213ENST00000489241 ZNF705GA8MUZ8 300 aaPredicted RBP2.7□□□□□ -1.98
XRN1-213ENST00000489241 H0YJW9 148 aa2.7□□□□□ -1.98
XRN1-213ENST00000489241 J3QT63 122 aa2.7□□□□□ -1.98
XRN1-213ENST00000489241 M0R1B8 84 aa2.7□□□□□ -1.98
XRN1-213ENST00000489241 PSPHP1O15172 72 aa2.7□□□□□ -1.98
XRN1-213ENST00000489241 P01737 135 aa2.7□□□□□ -1.98
XRN1-213ENST00000489241 RPN2P04844 631 aa2.7□□□□□ -1.98
XRN1-213ENST00000489241 PAX6P26367 422 aa2.7□□□□□ -1.98
XRN1-213ENST00000489241 SPAM1P38567 509 aa2.7□□□□□ -1.98
XRN1-213ENST00000489241 DNASE1L1P49184 302 aa2.7□□□□□ -1.98
XRN1-213ENST00000489241 RGS6P49758 472 aa2.7□□□□□ -1.98
XRN1-213ENST00000489241 IFITM3Q01628 133 aa2.7□□□□□ -1.98
XRN1-213ENST00000489241 PPIDQ08752 370 aaKnown RBP2.7□□□□□ -1.98
XRN1-213ENST00000489241 OPN5Q6U736 354 aa2.7□□□□□ -1.98
XRN1-213ENST00000489241 ZFP2Q6ZN57 461 aa2.7□□□□□ -1.98
XRN1-213ENST00000489241 FAM19A1Q7Z5A9 133 aa2.7□□□□□ -1.98
XRN1-213ENST00000489241 SETD3Q86TU7 594 aaPredicted RBP2.7□□□□□ -1.98
XRN1-213ENST00000489241 LGI3Q8N145 548 aa2.7□□□□□ -1.98
XRN1-213ENST00000489241 ZNF645Q8N7E2 425 aa2.7□□□□□ -1.98
XRN1-213ENST00000489241 CYB561A3Q8NBI2 242 aa2.7□□□□□ -1.98
XRN1-213ENST00000489241 OR10G2Q8NGC3 310 aa2.7□□□□□ -1.98
XRN1-213ENST00000489241 OR1J4Q8NGS1 313 aa2.7□□□□□ -1.98
XRN1-213ENST00000489241 ZFAND1Q8TCF1 268 aa2.7□□□□□ -1.98
XRN1-213ENST00000489241 DCAKDQ8WVC6 231 aa2.7□□□□□ -1.98
XRN1-213ENST00000489241 TMEM239Q8WW34 195 aa2.7□□□□□ -1.98
XRN1-213ENST00000489241 CDS1Q92903 461 aa2.7□□□□□ -1.98
XRN1-213ENST00000489241 NARS2Q96I59 477 aaKnown RBP2.7□□□□□ -1.98
XRN1-213ENST00000489241 Q96MT0 163 aa2.7□□□□□ -1.98
XRN1-213ENST00000489241 ZNF75AQ96N20 296 aa2.7□□□□□ -1.98
XRN1-213ENST00000489241 OR4K3Q96R72 315 aa2.7□□□□□ -1.98
XRN1-213ENST00000489241 CIB1Q99828 191 aa2.7□□□□□ -1.98
XRN1-213ENST00000489241 ACBD6Q9BR61 282 aa2.7□□□□□ -1.98
XRN1-213ENST00000489241 COPS4Q9BT78 406 aa2.7□□□□□ -1.98
XRN1-213ENST00000489241 EMC6Q9BV81 110 aa2.7□□□□□ -1.98
XRN1-213ENST00000489241 SFXN3Q9BWM7 321 aa2.7□□□□□ -1.98
XRN1-213ENST00000489241 OR52A5Q9H2C5 316 aa2.7□□□□□ -1.98
XRN1-213ENST00000489241 C1orf198Q9H425 327 aa2.7□□□□□ -1.98
XRN1-213ENST00000489241 GOLPH3Q9H4A6 298 aa2.7□□□□□ -1.98
XRN1-213ENST00000489241 SPACA1Q9HBV2 294 aa2.7□□□□□ -1.98
XRN1-213ENST00000489241 C8orf17Q9NRJ1 99 aa2.7□□□□□ -1.98
XRN1-213ENST00000489241 HEBP1Q9NRV9 189 aa2.7□□□□□ -1.98
XRN1-213ENST00000489241 ZNF355PQ9NSJ1 428 aa2.7□□□□□ -1.98
XRN1-213ENST00000489241 DDIT4Q9NX09 232 aa2.7□□□□□ -1.98
XRN1-213ENST00000489241 TFR2Q9UP52 801 aa2.7□□□□□ -1.98
XRN1-213ENST00000489241 WIF1Q9Y5W5 379 aa2.7□□□□□ -1.98
XRN1-213ENST00000489241 EIF4G1Q04637 1599 aaKnown RBP2.7□□□□□ -1.98
XRN1-213ENST00000489241 MAP3K19Q56UN5 1328 aa2.69□□□□□ -1.98
XRN1-213ENST00000489241 IGHV3-72A0A0B4J1Y9 119 aa2.69□□□□□ -1.98
XRN1-213ENST00000489241 TMEM223A0PJW6 202 aa2.69□□□□□ -1.98
XRN1-213ENST00000489241 ERICH2A1L162 156 aa2.69□□□□□ -1.98
XRN1-213ENST00000489241 hCG_2039718K7EN88 272 aa2.69□□□□□ -1.98
XRN1-213ENST00000489241 MANBAO00462 879 aa2.69□□□□□ -1.98
XRN1-213ENST00000489241 SNAI2O43623 268 aa2.69□□□□□ -1.98
XRN1-213ENST00000489241 BRI3O95415 125 aa2.69□□□□□ -1.98
XRN1-213ENST00000489241 IGKV1D-16P01601 117 aa2.69□□□□□ -1.98
XRN1-213ENST00000489241 OR56A5P0C7T3 313 aa2.69□□□□□ -1.98
XRN1-213ENST00000489241 NQO2P16083 231 aa2.69□□□□□ -1.98
XRN1-213ENST00000489241 MAGP20916 626 aa2.69□□□□□ -1.98
XRN1-213ENST00000489241 APLNRP35414 380 aa2.69□□□□□ -1.98
XRN1-213ENST00000489241 PCK1P35558 622 aa2.69□□□□□ -1.98
XRN1-213ENST00000489241 RANBP1P43487 201 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms