RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 TBX15Q96SF7 602 aa19.05■□□□□ 0.64
COL9A3-213ENST00000489045 CCL13Q99616 98 aa19.05■□□□□ 0.64
COL9A3-213ENST00000489045 PKP2Q99959 881 aa19.05■□□□□ 0.64
COL9A3-213ENST00000489045 DUX4Q9UBX2 424 aa19.05■□□□□ 0.64
COL9A3-213ENST00000489045 ZNF391Q9UJN7 358 aa19.05■□□□□ 0.64
COL9A3-213ENST00000489045 SRRM5B3KS81 715 aa19.04■□□□□ 0.64
COL9A3-213ENST00000489045 P2RY10O00398 339 aa19.04■□□□□ 0.64
COL9A3-213ENST00000489045 PRKYO43930 277 aa19.04■□□□□ 0.64
COL9A3-213ENST00000489045 KCTD18Q6PI47 426 aaPredicted RBP19.04■□□□□ 0.64
COL9A3-213ENST00000489045 FGFRL1Q8N441 504 aa19.04■□□□□ 0.64
COL9A3-213ENST00000489045 PIGCQ92535 297 aa19.04■□□□□ 0.64
COL9A3-213ENST00000489045 RPL3LQ92901 407 aaKnown RBP19.04■□□□□ 0.64
COL9A3-213ENST00000489045 WDFY2Q96P53 400 aa19.04■□□□□ 0.64
COL9A3-213ENST00000489045 TTTY10Q9BZA0 68 aa19.04■□□□□ 0.64
COL9A3-213ENST00000489045 FGF23Q9GZV9 251 aaPredicted RBP19.04■□□□□ 0.64
COL9A3-213ENST00000489045 ABCB9Q9NP78 766 aa19.04■□□□□ 0.64
COL9A3-213ENST00000489045 FAM206AQ9NX38 181 aa19.04■□□□□ 0.64
COL9A3-213ENST00000489045 TMEM210A6NLX4 147 aa19.03■□□□□ 0.64
COL9A3-213ENST00000489045 PRR32B1ATL7 298 aa19.03■□□□□ 0.64
COL9A3-213ENST00000489045 M0R129 80 aa19.03■□□□□ 0.64
COL9A3-213ENST00000489045 MITFO75030 526 aaPredicted RBP19.03■□□□□ 0.64
COL9A3-213ENST00000489045 ECDO95905 644 aaPredicted RBP19.03■□□□□ 0.64
COL9A3-213ENST00000489045 BPIFB3P59826 476 aa19.03■□□□□ 0.64
COL9A3-213ENST00000489045 GMFBP60983 142 aa19.03■□□□□ 0.64
COL9A3-213ENST00000489045 ESRRGP62508 458 aa19.03■□□□□ 0.64
COL9A3-213ENST00000489045 ATP6AP1Q15904 470 aa19.03■□□□□ 0.64
COL9A3-213ENST00000489045 METTL11BQ5VVY1 283 aa19.03■□□□□ 0.64
COL9A3-213ENST00000489045 DEGS2Q6QHC5 323 aa19.03■□□□□ 0.64
COL9A3-213ENST00000489045 KCTD8Q6ZWB6 473 aa19.03■□□□□ 0.64
COL9A3-213ENST00000489045 ZDHHC23Q8IYP9 409 aa19.03■□□□□ 0.64
COL9A3-213ENST00000489045 FAM81AQ8TBF8 368 aa19.03■□□□□ 0.64
COL9A3-213ENST00000489045 HPSE2Q8WWQ2 592 aa19.03■□□□□ 0.64
COL9A3-213ENST00000489045 MROQ9BYG7 248 aa19.03■□□□□ 0.64
COL9A3-213ENST00000489045 SIRPDQ9H106 197 aa19.03■□□□□ 0.64
COL9A3-213ENST00000489045 KRT84Q9NSB2 600 aa19.03■□□□□ 0.64
COL9A3-213ENST00000489045 COPS3Q9UNS2 423 aa19.03■□□□□ 0.64
COL9A3-213ENST00000489045 PCDHGB1Q9Y5G3 927 aa19.03■□□□□ 0.64
COL9A3-213ENST00000489045 HOXA3O43365 443 aaPredicted RBP19.02■□□□□ 0.64
COL9A3-213ENST00000489045 C11orf91Q3C1V1 193 aa19.02■□□□□ 0.64
COL9A3-213ENST00000489045 BCDIN3DQ7Z5W3 292 aaKnown RBP19.02■□□□□ 0.64
COL9A3-213ENST00000489045 FAM216BQ8N7L0 139 aa19.02■□□□□ 0.64
COL9A3-213ENST00000489045 SCCPDHQ8NBX0 429 aa19.02■□□□□ 0.64
COL9A3-213ENST00000489045 ZDHHC16Q969W1 377 aa19.02■□□□□ 0.64
COL9A3-213ENST00000489045 C12orf43Q96C57 262 aaKnown RBP19.02■□□□□ 0.64
COL9A3-213ENST00000489045 RNF170Q96K19 258 aa19.02■□□□□ 0.64
COL9A3-213ENST00000489045 OR8B4Q96RC9 309 aa19.02■□□□□ 0.64
COL9A3-213ENST00000489045 PRRG3Q9BZD7 231 aa19.02■□□□□ 0.64
COL9A3-213ENST00000489045 PRDM13Q9H4Q3 707 aa19.02■□□□□ 0.64
COL9A3-213ENST00000489045 RPUSD1Q9UJJ7 312 aaKnown RBP19.02■□□□□ 0.64
COL9A3-213ENST00000489045 A0A0U1RQV5 110 aa19.01■□□□□ 0.63
COL9A3-213ENST00000489045 CENPVL3A0A0U1RRI6 287 aa19.01■□□□□ 0.63
COL9A3-213ENST00000489045 ZNF816-ZNF321PA0A0X1KG74 233 aa19.01■□□□□ 0.63
COL9A3-213ENST00000489045 TMEM269A0A1B0GVZ9 245 aa19.01■□□□□ 0.63
COL9A3-213ENST00000489045 ACOD1A6NK06 481 aa19.01■□□□□ 0.63
COL9A3-213ENST00000489045 ARF6P62330 175 aa19.01■□□□□ 0.63
COL9A3-213ENST00000489045 STUMQ69YW2 141 aa19.01■□□□□ 0.63
COL9A3-213ENST00000489045 SLC36A1Q7Z2H8 476 aa19.01■□□□□ 0.63
COL9A3-213ENST00000489045 OR10Z1Q8NGY1 313 aa19.01■□□□□ 0.63
COL9A3-213ENST00000489045 ASB17Q8WXJ9 295 aa19.01■□□□□ 0.63
COL9A3-213ENST00000489045 TAF15Q92804 592 aaKnown RBP eCLIP19.01■□□□□ 0.63
COL9A3-213ENST00000489045 CNN2Q99439 309 aaKnown RBP19.01■□□□□ 0.63
COL9A3-213ENST00000489045 WDR13Q9H1Z4 485 aa19.01■□□□□ 0.63
COL9A3-213ENST00000489045 HAO2Q9NYQ3 351 aa19.01■□□□□ 0.63
COL9A3-213ENST00000489045 TMEM14AQ9Y6G1 99 aa19.01■□□□□ 0.63
COL9A3-213ENST00000489045 G3V2T6 193 aa19■□□□□ 0.63
COL9A3-213ENST00000489045 AKR7A2O43488 359 aa19■□□□□ 0.63
COL9A3-213ENST00000489045 AMY2BP19961 511 aa19■□□□□ 0.63
COL9A3-213ENST00000489045 EPHA2P29317 976 aa19■□□□□ 0.63
COL9A3-213ENST00000489045 MAP2K3P46734 347 aa19■□□□□ 0.63
COL9A3-213ENST00000489045 ROM1Q03395 351 aa19■□□□□ 0.63
COL9A3-213ENST00000489045 IKZF1Q13422 519 aa19■□□□□ 0.63
COL9A3-213ENST00000489045 PDCD1Q15116 288 aa19■□□□□ 0.63
COL9A3-213ENST00000489045 FAM76BQ5HYJ3 339 aa19■□□□□ 0.63
COL9A3-213ENST00000489045 SLX4IPQ5VYV7 408 aa19■□□□□ 0.63
COL9A3-213ENST00000489045 COMMD2Q86X83 199 aa19■□□□□ 0.63
COL9A3-213ENST00000489045 ZNF679Q8IYX0 411 aa19■□□□□ 0.63
COL9A3-213ENST00000489045 TCEANCQ8N8B7 351 aa19■□□□□ 0.63
COL9A3-213ENST00000489045 OR5T2Q8NGG2 359 aa19■□□□□ 0.63
COL9A3-213ENST00000489045 GATAD2BQ8WXI9 593 aa19■□□□□ 0.63
COL9A3-213ENST00000489045 LHX4Q969G2 390 aa19■□□□□ 0.63
COL9A3-213ENST00000489045 HIST1H2AAQ96QV6 131 aa19■□□□□ 0.63
COL9A3-213ENST00000489045 ZNF747Q9BV97 191 aa19■□□□□ 0.63
COL9A3-213ENST00000489045 PBOV1Q9GZY1 135 aa19■□□□□ 0.63
COL9A3-213ENST00000489045 SNTG1Q9NSN8 517 aa19■□□□□ 0.63
COL9A3-213ENST00000489045 DNAJB11Q9UBS4 358 aa19■□□□□ 0.63
COL9A3-213ENST00000489045 IKZF2Q9UKS7 526 aa19■□□□□ 0.63
COL9A3-213ENST00000489045 ZAR1LA6NP61 321 aa18.99■□□□□ 0.63
COL9A3-213ENST00000489045 NDUFB3O43676 98 aa18.99■□□□□ 0.63
COL9A3-213ENST00000489045 ZNF254O75437 659 aa18.99■□□□□ 0.63
COL9A3-213ENST00000489045 FASP25445 335 aa18.99■□□□□ 0.63
COL9A3-213ENST00000489045 DCTDP32321 178 aa18.99■□□□□ 0.63
COL9A3-213ENST00000489045 RASSF2P50749 326 aa18.99■□□□□ 0.63
COL9A3-213ENST00000489045 GPM6AP51674 278 aa18.99■□□□□ 0.63
COL9A3-213ENST00000489045 RIDAP52758 137 aaKnown RBP18.99■□□□□ 0.63
COL9A3-213ENST00000489045 MFGE8Q08431 387 aaPredicted RBP18.99■□□□□ 0.63
COL9A3-213ENST00000489045 ZNF829Q3KNS6 432 aaPredicted RBP18.99■□□□□ 0.63
COL9A3-213ENST00000489045 CEP78Q5JTW2 689 aa18.99■□□□□ 0.63
COL9A3-213ENST00000489045 KDM4DQ6B0I6 523 aa18.99■□□□□ 0.63
COL9A3-213ENST00000489045 MEPCEQ7L2J0 689 aaKnown RBP18.99■□□□□ 0.63
COL9A3-213ENST00000489045 SGMS2Q8NHU3 365 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms