RNA–Protein interactions for RNA: ENST00000488454.5

SKA1-204, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 3 BASIC

Gene SKA1, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-204ENST00000488454 TMEM255AQ5JRV8 349 aa8.76□□□□□ -1.01
SKA1-204ENST00000488454 CLVS2Q5SYC1 327 aa8.76□□□□□ -1.01
SKA1-204ENST00000488454 Q6ZR03 302 aa8.76□□□□□ -1.01
SKA1-204ENST00000488454 MOB3CQ70IA8 216 aa8.76□□□□□ -1.01
SKA1-204ENST00000488454 ZDHHC23Q8IYP9 409 aa8.76□□□□□ -1.01
SKA1-204ENST00000488454 MS4A15Q8N5U1 240 aa8.76□□□□□ -1.01
SKA1-204ENST00000488454 FGGYQ96C11 551 aa8.76□□□□□ -1.01
SKA1-204ENST00000488454 MBD6Q96DN6 1003 aa8.76□□□□□ -1.01
SKA1-204ENST00000488454 PERPQ96FX8 193 aa8.76□□□□□ -1.01
SKA1-204ENST00000488454 MICU1Q9BPX6 476 aa8.76□□□□□ -1.01
SKA1-204ENST00000488454 ADAT1Q9BUB4 502 aaKnown RBP8.76□□□□□ -1.01
SKA1-204ENST00000488454 CXXC4Q9H2H0 198 aa8.76□□□□□ -1.01
SKA1-204ENST00000488454 NEK6Q9HC98 313 aa8.76□□□□□ -1.01
SKA1-204ENST00000488454 ZNF275Q9NSD4 429 aaPredicted RBP8.76□□□□□ -1.01
SKA1-204ENST00000488454 ZNF701Q9NV72 531 aaPredicted RBP8.76□□□□□ -1.01
SKA1-204ENST00000488454 C14orf119Q9NWQ9 140 aa8.76□□□□□ -1.01
SKA1-204ENST00000488454 SLC7A11Q9UPY5 501 aa8.76□□□□□ -1.01
SKA1-204ENST00000488454 SIRT4Q9Y6E7 314 aaPredicted RBP8.76□□□□□ -1.01
SKA1-204ENST00000488454 CRYBG3Q68DQ2 2970 aa8.76□□□□□ -1.01
SKA1-204ENST00000488454 MAGEA13PA6NCF6 341 aa8.75□□□□□ -1.01
SKA1-204ENST00000488454 TRIM64A6NGJ6 449 aa8.75□□□□□ -1.01
SKA1-204ENST00000488454 A6NIN4 97 aa8.75□□□□□ -1.01
SKA1-204ENST00000488454 GATBO75879 557 aaKnown RBP8.75□□□□□ -1.01
SKA1-204ENST00000488454 CD55P08174 381 aa8.75□□□□□ -1.01
SKA1-204ENST00000488454 ADH4P08319 380 aa8.75□□□□□ -1.01
SKA1-204ENST00000488454 PAX1P15863 534 aa8.75□□□□□ -1.01
SKA1-204ENST00000488454 CPEP16870 476 aa8.75□□□□□ -1.01
SKA1-204ENST00000488454 TNFRSF1AP19438 455 aa8.75□□□□□ -1.01
SKA1-204ENST00000488454 PCMT1P22061 227 aa8.75□□□□□ -1.01
SKA1-204ENST00000488454 MAGEB1P43366 347 aa8.75□□□□□ -1.01
SKA1-204ENST00000488454 SOX2P48431 317 aa8.75□□□□□ -1.01
SKA1-204ENST00000488454 PTH2RP49190 550 aa8.75□□□□□ -1.01
SKA1-204ENST00000488454 PRDX4Q13162 271 aa8.75□□□□□ -1.01
SKA1-204ENST00000488454 TNK1Q13470 666 aa8.75□□□□□ -1.01
SKA1-204ENST00000488454 TPBGQ13641 420 aa8.75□□□□□ -1.01
SKA1-204ENST00000488454 TESK1Q15569 626 aa8.75□□□□□ -1.01
SKA1-204ENST00000488454 TRAM1Q15629 374 aa8.75□□□□□ -1.01
SKA1-204ENST00000488454 NEDD8Q15843 81 aa8.75□□□□□ -1.01
SKA1-204ENST00000488454 ARMCX4Q5H9R4 360 aa8.75□□□□□ -1.01
SKA1-204ENST00000488454 UBE2UQ5VVX9 321 aa8.75□□□□□ -1.01
SKA1-204ENST00000488454 LIPKQ5VXJ0 399 aa8.75□□□□□ -1.01
SKA1-204ENST00000488454 PLCXD3Q63HM9 321 aa8.75□□□□□ -1.01
SKA1-204ENST00000488454 Q6ZSR3 168 aa8.75□□□□□ -1.01
SKA1-204ENST00000488454 KCTD8Q6ZWB6 473 aa8.75□□□□□ -1.01
SKA1-204ENST00000488454 SERPINA12Q8IW75 414 aa8.75□□□□□ -1.01
SKA1-204ENST00000488454 OR10AD1Q8NGE0 317 aa8.75□□□□□ -1.01
SKA1-204ENST00000488454 OR5D14Q8NGL3 314 aa8.75□□□□□ -1.01
SKA1-204ENST00000488454 RPS4Y2Q8TD47 263 aa8.75□□□□□ -1.01
SKA1-204ENST00000488454 IGFBPL1Q8WX77 278 aa8.75□□□□□ -1.01
SKA1-204ENST00000488454 PP6455Q8WZ26 134 aa8.75□□□□□ -1.01
SKA1-204ENST00000488454 GTF3AQ92664 365 aaKnown RBP8.75□□□□□ -1.01
SKA1-204ENST00000488454 THRSPQ92748 146 aa8.75□□□□□ -1.01
SKA1-204ENST00000488454 RNF170Q96K19 258 aa8.75□□□□□ -1.01
SKA1-204ENST00000488454 TMED9Q9BVK6 235 aa8.75□□□□□ -1.01
SKA1-204ENST00000488454 RTL8AQ9BWD3 113 aa8.75□□□□□ -1.01
SKA1-204ENST00000488454 SAP30LQ9HAJ7 183 aa8.75□□□□□ -1.01
SKA1-204ENST00000488454 IL19Q9UHD0 177 aa8.75□□□□□ -1.01
SKA1-204ENST00000488454 CELSR2Q9HCU4 2923 aa8.74□□□□□ -1.01
SKA1-204ENST00000488454 ANKRD61A6NGH8 418 aa8.74□□□□□ -1.01
SKA1-204ENST00000488454 F5H5P2 479 aa8.74□□□□□ -1.01
SKA1-204ENST00000488454 H0YL77 283 aa8.74□□□□□ -1.01
SKA1-204ENST00000488454 SSX4O60224 188 aa8.74□□□□□ -1.01
SKA1-204ENST00000488454 GRPP07492 148 aa8.74□□□□□ -1.01
SKA1-204ENST00000488454 DAOP14920 347 aa8.74□□□□□ -1.01
SKA1-204ENST00000488454 PSMA1P25786 263 aaKnown RBP8.74□□□□□ -1.01
SKA1-204ENST00000488454 MAPK3P27361 379 aaPredicted RBP8.74□□□□□ -1.01
SKA1-204ENST00000488454 CARTPTQ16568 116 aa8.74□□□□□ -1.01
SKA1-204ENST00000488454 CEACAM21Q3KPI0 293 aa8.74□□□□□ -1.01
SKA1-204ENST00000488454 Q499Y3 187 aa8.74□□□□□ -1.01
SKA1-204ENST00000488454 CEP78Q5JTW2 689 aa8.74□□□□□ -1.01
SKA1-204ENST00000488454 KRT74Q7RTS7 529 aa8.74□□□□□ -1.01
SKA1-204ENST00000488454 LRRC75A-AS1Q8N1F1 130 aa8.74□□□□□ -1.01
SKA1-204ENST00000488454 CELF2-AS1Q8N7Q2 184 aa8.74□□□□□ -1.01
SKA1-204ENST00000488454 OR5A2Q8NGI9 324 aa8.74□□□□□ -1.01
SKA1-204ENST00000488454 OR51A4Q8NGJ6 313 aa8.74□□□□□ -1.01
SKA1-204ENST00000488454 OR10AC1Q8NH08 325 aa8.74□□□□□ -1.01
SKA1-204ENST00000488454 UBASH3BQ8TF42 649 aa8.74□□□□□ -1.01
SKA1-204ENST00000488454 ADAT3Q96EY9 351 aaPredicted RBP8.74□□□□□ -1.01
SKA1-204ENST00000488454 PGLYRP3Q96LB9 341 aa8.74□□□□□ -1.01
SKA1-204ENST00000488454 OPALINQ96PE5 141 aa8.74□□□□□ -1.01
SKA1-204ENST00000488454 TECTBQ96PL2 329 aa8.74□□□□□ -1.01
SKA1-204ENST00000488454 SORCS2Q96PQ0 1159 aa8.74□□□□□ -1.01
SKA1-204ENST00000488454 OR2V2Q96R30 315 aa8.74□□□□□ -1.01
SKA1-204ENST00000488454 TPSG1Q9NRR2 321 aa8.74□□□□□ -1.01
SKA1-204ENST00000488454 CKLFQ9UBR5 152 aa8.74□□□□□ -1.01
SKA1-204ENST00000488454 PLCE1Q9P212 2302 aa8.74□□□□□ -1.01
SKA1-204ENST00000488454 DCHS2Q6V1P9 2916 aa8.74□□□□□ -1.01
SKA1-204ENST00000488454 A0A1B0GWJ7 208 aa8.73□□□□□ -1.01
SKA1-204ENST00000488454 TMEM210A6NLX4 147 aa8.73□□□□□ -1.01
SKA1-204ENST00000488454 CCRL2O00421 344 aa8.73□□□□□ -1.01
SKA1-204ENST00000488454 MAGEB3O15480 346 aa8.73□□□□□ -1.01
SKA1-204ENST00000488454 MLNRO43193 412 aa8.73□□□□□ -1.01
SKA1-204ENST00000488454 LMX1BO60663 402 aa8.73□□□□□ -1.01
SKA1-204ENST00000488454 NDUFS7O75251 213 aa8.73□□□□□ -1.01
SKA1-204ENST00000488454 INMTO95050 263 aa8.73□□□□□ -1.01
SKA1-204ENST00000488454 HPXP02790 462 aa8.73□□□□□ -1.01
SKA1-204ENST00000488454 IRF2P14316 349 aa8.73□□□□□ -1.01
SKA1-204ENST00000488454 PRKACBP22694 351 aa8.73□□□□□ -1.01
SKA1-204ENST00000488454 CD200P41217 278 aa8.73□□□□□ -1.01
SKA1-204ENST00000488454 DSCR9P59020 149 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms