RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 C19orf84I3L1E1 186 aa11.01□□□□□ -0.65
NELFE-209ENST00000488426 CTDSPLO15194 276 aa11.01□□□□□ -0.65
NELFE-209ENST00000488426 CGAP01215 116 aa11.01□□□□□ -0.65
NELFE-209ENST00000488426 IL2RAP01589 272 aa11.01□□□□□ -0.65
NELFE-209ENST00000488426 SERPINA5P05154 406 aa11.01□□□□□ -0.65
NELFE-209ENST00000488426 OCMP0CE72 109 aaPredicted RBP11.01□□□□□ -0.65
NELFE-209ENST00000488426 ARSBP15848 533 aa11.01□□□□□ -0.65
NELFE-209ENST00000488426 APLNRP35414 380 aa11.01□□□□□ -0.65
NELFE-209ENST00000488426 MNDAP41218 407 aa11.01□□□□□ -0.65
NELFE-209ENST00000488426 UBE2NP61088 152 aaKnown RBP11.01□□□□□ -0.65
NELFE-209ENST00000488426 RIPPLY1Q0D2K3 151 aa11.01□□□□□ -0.65
NELFE-209ENST00000488426 MADCAM1Q13477 382 aa11.01□□□□□ -0.65
NELFE-209ENST00000488426 C2orf76Q3KRA6 126 aa11.01□□□□□ -0.65
NELFE-209ENST00000488426 GABRG1Q8N1C3 465 aa11.01□□□□□ -0.65
NELFE-209ENST00000488426 OR2AE1Q8NHA4 323 aa11.01□□□□□ -0.65
NELFE-209ENST00000488426 PTX4Q96A99 478 aa11.01□□□□□ -0.65
NELFE-209ENST00000488426 APOBEC3DQ96AK3 386 aaPredicted RBP11.01□□□□□ -0.65
NELFE-209ENST00000488426 STARD4Q96DR4 205 aa11.01□□□□□ -0.65
NELFE-209ENST00000488426 TBC1D24Q9ULP9 559 aa11.01□□□□□ -0.65
NELFE-209ENST00000488426 hCG_38984A0A1B0GV85 526 aa11□□□□□ -0.65
NELFE-209ENST00000488426 PRRG2O14669 202 aa11□□□□□ -0.65
NELFE-209ENST00000488426 RAD51DO75771 328 aa11□□□□□ -0.65
NELFE-209ENST00000488426 TOXO94900 526 aa11□□□□□ -0.65
NELFE-209ENST00000488426 FAHP16930 419 aa11□□□□□ -0.65
NELFE-209ENST00000488426 ZNF93P35789 620 aaPredicted RBP11□□□□□ -0.65
NELFE-209ENST00000488426 MMP15P51511 669 aa11□□□□□ -0.65
NELFE-209ENST00000488426 ASAH1Q13510 395 aa11□□□□□ -0.65
NELFE-209ENST00000488426 P2RY6Q15077 328 aa11□□□□□ -0.65
NELFE-209ENST00000488426 OR8B8Q15620 311 aa11□□□□□ -0.65
NELFE-209ENST00000488426 ZBTB37Q5TC79 503 aa11□□□□□ -0.65
NELFE-209ENST00000488426 HACD4Q5VWC8 232 aa11□□□□□ -0.65
NELFE-209ENST00000488426 MDP1Q86V88 176 aa11□□□□□ -0.65
NELFE-209ENST00000488426 ZNF584Q8IVC4 421 aa11□□□□□ -0.65
NELFE-209ENST00000488426 C19orf18Q8NEA5 215 aa11□□□□□ -0.65
NELFE-209ENST00000488426 ZNF75AQ96N20 296 aa11□□□□□ -0.65
NELFE-209ENST00000488426 DMRTA2Q96SC8 542 aa11□□□□□ -0.65
NELFE-209ENST00000488426 ABHD1Q96SE0 405 aa11□□□□□ -0.65
NELFE-209ENST00000488426 TP63Q9H3D4 680 aaPredicted RBP11□□□□□ -0.65
NELFE-209ENST00000488426 OPA3Q9H6K4 179 aa11□□□□□ -0.65
NELFE-209ENST00000488426 CNTD2Q9H8S5 307 aa11□□□□□ -0.65
NELFE-209ENST00000488426 TMEM272A0A1B0GTI8 110 aa11□□□□□ -0.65
NELFE-209ENST00000488426 LDLRAD4O15165 306 aa11□□□□□ -0.65
NELFE-209ENST00000488426 LYZL6O75951 148 aa11□□□□□ -0.65
NELFE-209ENST00000488426 BPNT1O95861 308 aa11□□□□□ -0.65
NELFE-209ENST00000488426 HCKP08631 526 aa11□□□□□ -0.65
NELFE-209ENST00000488426 RAB6AP20340 208 aa11□□□□□ -0.65
NELFE-209ENST00000488426 HOXC12P31275 282 aa11□□□□□ -0.65
NELFE-209ENST00000488426 CEACAM8P31997 349 aaPredicted RBP11□□□□□ -0.65
NELFE-209ENST00000488426 GSK3AP49840 483 aa11□□□□□ -0.65
NELFE-209ENST00000488426 ZNF92Q03936 586 aa11□□□□□ -0.65
NELFE-209ENST00000488426 FAM209AQ5JX71 171 aa11□□□□□ -0.65
NELFE-209ENST00000488426 BEND4Q6ZU67 534 aa11□□□□□ -0.65
NELFE-209ENST00000488426 C17orf78Q8N4C9 275 aa11□□□□□ -0.65
NELFE-209ENST00000488426 OR4D6Q8NGJ1 314 aa11□□□□□ -0.65
NELFE-209ENST00000488426 SFXN3Q9BWM7 321 aa11□□□□□ -0.65
NELFE-209ENST00000488426 NEK6Q9HC98 313 aa11□□□□□ -0.65
NELFE-209ENST00000488426 POLQO75417 2590 aa10.99□□□□□ -0.65
NELFE-209ENST00000488426 IGKV1-9A0A0C4DH69 117 aa10.99□□□□□ -0.65
NELFE-209ENST00000488426 J3QW42 95 aa10.99□□□□□ -0.65
NELFE-209ENST00000488426 GSTZ1O43708 216 aaPredicted RBP10.99□□□□□ -0.65
NELFE-209ENST00000488426 CCNOP22674 350 aa10.99□□□□□ -0.65
NELFE-209ENST00000488426 CDK2P24941 298 aa10.99□□□□□ -0.65
NELFE-209ENST00000488426 ACKR3P25106 362 aa10.99□□□□□ -0.65
NELFE-209ENST00000488426 MRPS10P82664 201 aaKnown RBP10.99□□□□□ -0.65
NELFE-209ENST00000488426 FAM3AP98173 230 aa10.99□□□□□ -0.65
NELFE-209ENST00000488426 MALLQ13021 153 aa10.99□□□□□ -0.65
NELFE-209ENST00000488426 TMEM69Q5SWH9 247 aa10.99□□□□□ -0.65
NELFE-209ENST00000488426 DTX3Q8N9I9 347 aa10.99□□□□□ -0.65
NELFE-209ENST00000488426 ZNF610Q8N9Z0 462 aa10.99□□□□□ -0.65
NELFE-209ENST00000488426 RFT1Q96AA3 541 aa10.99□□□□□ -0.65
NELFE-209ENST00000488426 SPSB1Q96BD6 273 aa10.99□□□□□ -0.65
NELFE-209ENST00000488426 OBP2BQ9NPH6 170 aa10.99□□□□□ -0.65
NELFE-209ENST00000488426 DIABLOQ9NR28 239 aa10.99□□□□□ -0.65
NELFE-209ENST00000488426 FBLN5Q9UBX5 448 aa10.99□□□□□ -0.65
NELFE-209ENST00000488426 RTTNQ86VV8 2226 aa10.99□□□□□ -0.65
NELFE-209ENST00000488426 A0A0A6YYH2 397 aa10.98□□□□□ -0.65
NELFE-209ENST00000488426 A6NJ64 397 aa10.98□□□□□ -0.65
NELFE-209ENST00000488426 XRCC3O43542 346 aa10.98□□□□□ -0.65
NELFE-209ENST00000488426 CTAG2O75638 210 aa10.98□□□□□ -0.65
NELFE-209ENST00000488426 ZNF14P17017 642 aaPredicted RBP10.98□□□□□ -0.65
NELFE-209ENST00000488426 INPP1P49441 399 aa10.98□□□□□ -0.65
NELFE-209ENST00000488426 TNK1Q13470 666 aa10.98□□□□□ -0.65
NELFE-209ENST00000488426 UBE2V2Q15819 145 aa10.98□□□□□ -0.65
NELFE-209ENST00000488426 TBC1D28Q2M2D7 210 aa10.98□□□□□ -0.65
NELFE-209ENST00000488426 TMEM42Q69YG0 159 aa10.98□□□□□ -0.65
NELFE-209ENST00000488426 ZNF808Q8N4W9 903 aaPredicted RBP10.98□□□□□ -0.65
NELFE-209ENST00000488426 PNLDC1Q8NA58 520 aaKnown RBP10.98□□□□□ -0.65
NELFE-209ENST00000488426 SLC30A7Q8NEW0 376 aa10.98□□□□□ -0.65
NELFE-209ENST00000488426 SMIM4Q8WVI0 70 aa10.98□□□□□ -0.65
NELFE-209ENST00000488426 TRIM63Q969Q1 353 aa10.98□□□□□ -0.65
NELFE-209ENST00000488426 PHF21AQ96BD5 680 aa10.98□□□□□ -0.65
NELFE-209ENST00000488426 CPNE2Q96FN4 548 aaPredicted RBP10.98□□□□□ -0.65
NELFE-209ENST00000488426 TECTBQ96PL2 329 aa10.98□□□□□ -0.65
NELFE-209ENST00000488426 THAP7Q9BT49 309 aaPredicted RBP10.98□□□□□ -0.65
NELFE-209ENST00000488426 MRPS7Q9Y2R9 242 aaKnown RBP10.98□□□□□ -0.65
NELFE-209ENST00000488426 AKAP9Q99996 3911 aa10.98□□□□□ -0.65
NELFE-209ENST00000488426 INTS1Q8N201 2190 aaKnown RBP10.98□□□□□ -0.65
NELFE-209ENST00000488426 UBBP0CG47 229 aa10.98□□□□□ -0.65
NELFE-209ENST00000488426 GLI4P10075 376 aa10.98□□□□□ -0.65
NELFE-209ENST00000488426 PTH2RP49190 550 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms