RNA–Protein interactions for RNA: ENST00000488353.2

RER1-207, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 2,469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-207ENST00000488353 PTPMT1Q8WUK0 201 aaPredicted RBP12.6□□□□□ -0.39
RER1-207ENST00000488353 MEGF10Q96KG7 1140 aa12.6□□□□□ -0.39
RER1-207ENST00000488353 YPEL4Q96NS1 127 aa12.6□□□□□ -0.39
RER1-207ENST00000488353 SLC35B3Q9H1N7 401 aa12.6□□□□□ -0.39
RER1-207ENST00000488353 CNTD2Q9H8S5 307 aa12.6□□□□□ -0.39
RER1-207ENST00000488353 DOK5Q9P104 306 aa12.6□□□□□ -0.39
RER1-207ENST00000488353 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.59□□□□□ -0.39
RER1-207ENST00000488353 XKRYO14609 159 aa12.59□□□□□ -0.39
RER1-207ENST00000488353 OR6A2O95222 327 aa12.59□□□□□ -0.39
RER1-207ENST00000488353 SPARCP09486 303 aa12.59□□□□□ -0.39
RER1-207ENST00000488353 NPY4RP50391 375 aa12.59□□□□□ -0.39
RER1-207ENST00000488353 SLC37A1P57057 533 aa12.59□□□□□ -0.39
RER1-207ENST00000488353 SUPT4H1P63272 117 aaKnown RBP12.59□□□□□ -0.39
RER1-207ENST00000488353 UBAC2Q8NBM4 344 aa12.59□□□□□ -0.39
RER1-207ENST00000488353 TCTN2Q96GX1 697 aa12.59□□□□□ -0.39
RER1-207ENST00000488353 PARP12Q9H0J9 701 aaKnown RBP12.59□□□□□ -0.39
RER1-207ENST00000488353 PRR13Q9NZ81 148 aa12.59□□□□□ -0.39
RER1-207ENST00000488353 RHBDD3Q9Y3P4 386 aa12.59□□□□□ -0.39
RER1-207ENST00000488353 VPS13AQ96RL7 3174 aa12.59□□□□□ -0.39
RER1-207ENST00000488353 SEC14L6B5MCN3 397 aa12.59□□□□□ -0.39
RER1-207ENST00000488353 H7C1Q1 480 aa12.59□□□□□ -0.39
RER1-207ENST00000488353 IL33O95760 270 aa12.59□□□□□ -0.39
RER1-207ENST00000488353 CXCR1P25024 350 aa12.59□□□□□ -0.39
RER1-207ENST00000488353 OR1D4P47884 311 aa12.59□□□□□ -0.39
RER1-207ENST00000488353 HSD17B7P56937 341 aa12.59□□□□□ -0.39
RER1-207ENST00000488353 RPS23P62266 143 aaKnown RBP12.59□□□□□ -0.39
RER1-207ENST00000488353 ZNF117Q03924 483 aa12.59□□□□□ -0.39
RER1-207ENST00000488353 ZNF616Q08AN1 781 aa12.59□□□□□ -0.39
RER1-207ENST00000488353 UNC119Q13432 240 aa12.59□□□□□ -0.39
RER1-207ENST00000488353 SSX2Q16385 188 aa12.59□□□□□ -0.39
RER1-207ENST00000488353 VAX1Q5SQQ9 334 aa12.59□□□□□ -0.39
RER1-207ENST00000488353 OR2A2Q6IF42 318 aa12.59□□□□□ -0.39
RER1-207ENST00000488353 ZNF574Q6ZN55 896 aaPredicted RBP12.59□□□□□ -0.39
RER1-207ENST00000488353 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.59□□□□□ -0.39
RER1-207ENST00000488353 MARCH3Q86UD3 253 aa12.59□□□□□ -0.39
RER1-207ENST00000488353 FOXRED2Q8IWF2 684 aa12.59□□□□□ -0.39
RER1-207ENST00000488353 DMRTC2Q8IXT2 367 aaPredicted RBP12.59□□□□□ -0.39
RER1-207ENST00000488353 OR10D4PQ8NGN7 298 aa12.59□□□□□ -0.39
RER1-207ENST00000488353 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.59□□□□□ -0.39
RER1-207ENST00000488353 TSLPQ969D9 159 aa12.59□□□□□ -0.39
RER1-207ENST00000488353 NUDT16L1Q9BRJ7 211 aaKnown RBP12.59□□□□□ -0.39
RER1-207ENST00000488353 CNTNAP3Q9BZ76 1288 aa12.59□□□□□ -0.39
RER1-207ENST00000488353 BCO1Q9HAY6 547 aa12.59□□□□□ -0.39
RER1-207ENST00000488353 LUZP4Q9P127 313 aa12.59□□□□□ -0.39
RER1-207ENST00000488353 FBXL17Q9UF56 701 aa12.59□□□□□ -0.39
RER1-207ENST00000488353 HDGFL3Q9Y3E1 203 aa12.59□□□□□ -0.39
RER1-207ENST00000488353 BCAT2O15382 392 aaPredicted RBP12.58□□□□□ -0.4
RER1-207ENST00000488353 NME2P1O60361 137 aa12.58□□□□□ -0.4
RER1-207ENST00000488353 DANCRP0C864 163 aa12.58□□□□□ -0.4
RER1-207ENST00000488353 MYF5P13349 255 aa12.58□□□□□ -0.4
RER1-207ENST00000488353 DDTP30046 118 aa12.58□□□□□ -0.4
RER1-207ENST00000488353 FCGR2CP31995 323 aa12.58□□□□□ -0.4
RER1-207ENST00000488353 THBS4P35443 961 aa12.58□□□□□ -0.4
RER1-207ENST00000488353 CLDN6P56747 220 aa12.58□□□□□ -0.4
RER1-207ENST00000488353 TMEM33P57088 247 aa12.58□□□□□ -0.4
RER1-207ENST00000488353 PKIAP61925 76 aa12.58□□□□□ -0.4
RER1-207ENST00000488353 C14orf28Q4W4Y0 310 aa12.58□□□□□ -0.4
RER1-207ENST00000488353 LBHQ53QV2 105 aaPredicted RBP12.58□□□□□ -0.4
RER1-207ENST00000488353 ZNF529Q6P280 563 aa12.58□□□□□ -0.4
RER1-207ENST00000488353 FAM219AQ8IW50 185 aa12.58□□□□□ -0.4
RER1-207ENST00000488353 PBDC1Q9BVG4 233 aa12.58□□□□□ -0.4
RER1-207ENST00000488353 TMED3Q9Y3Q3 217 aa12.58□□□□□ -0.4
RER1-207ENST00000488353 LRP12Q9Y561 859 aa12.58□□□□□ -0.4
RER1-207ENST00000488353 WDR87Q6ZQQ6 2873 aa12.58□□□□□ -0.4
RER1-207ENST00000488353 ARID1AO14497 2285 aa12.58□□□□□ -0.4
RER1-207ENST00000488353 LOC107986453A0A1B0GWG9 222 aa12.57□□□□□ -0.4
RER1-207ENST00000488353 TSTD3H0UI37 97 aa12.57□□□□□ -0.4
RER1-207ENST00000488353 TERTO14746 1132 aaKnown RBP12.57□□□□□ -0.4
RER1-207ENST00000488353 ZNF354AO60765 605 aaPredicted RBP12.57□□□□□ -0.4
RER1-207ENST00000488353 BPNT1O95861 308 aa12.57□□□□□ -0.4
RER1-207ENST00000488353 F10P00742 488 aa12.57□□□□□ -0.4
RER1-207ENST00000488353 ISG15P05161 165 aa12.57□□□□□ -0.4
RER1-207ENST00000488353 FPR2P25090 351 aa12.57□□□□□ -0.4
RER1-207ENST00000488353 PRSS58Q8IYP2 241 aa12.57□□□□□ -0.4
RER1-207ENST00000488353 MR1Q95460 341 aa12.57□□□□□ -0.4
RER1-207ENST00000488353 C8orf44Q96CB5 159 aa12.57□□□□□ -0.4
RER1-207ENST00000488353 SSX3Q99909 188 aa12.57□□□□□ -0.4
RER1-207ENST00000488353 SLC16A7O60669 478 aa12.57□□□□□ -0.4
RER1-207ENST00000488353 SFTPBP07988 381 aa12.57□□□□□ -0.4
RER1-207ENST00000488353 ZNF708P17019 499 aa12.57□□□□□ -0.4
RER1-207ENST00000488353 NDUFB7P17568 137 aa12.57□□□□□ -0.4
RER1-207ENST00000488353 PI3P19957 117 aa12.57□□□□□ -0.4
RER1-207ENST00000488353 BCKDHBP21953 392 aa12.57□□□□□ -0.4
RER1-207ENST00000488353 GABRA4P48169 554 aa12.57□□□□□ -0.4
RER1-207ENST00000488353 SPCS3P61009 180 aa12.57□□□□□ -0.4
RER1-207ENST00000488353 SPEM2Q0P670 501 aa12.57□□□□□ -0.4
RER1-207ENST00000488353 BIKQ13323 160 aa12.57□□□□□ -0.4
RER1-207ENST00000488353 SQSTM1Q13501 440 aa12.57□□□□□ -0.4
RER1-207ENST00000488353 Q7L0L9 218 aa12.57□□□□□ -0.4
RER1-207ENST00000488353 PEG10Q86TG7 708 aaKnown RBP12.57□□□□□ -0.4
RER1-207ENST00000488353 METTL21AQ8WXB1 218 aa12.57□□□□□ -0.4
RER1-207ENST00000488353 LURAP1Q96LR2 239 aa12.57□□□□□ -0.4
RER1-207ENST00000488353 GNRHR2Q96P88 292 aa12.57□□□□□ -0.4
RER1-207ENST00000488353 RTBDNQ9BSG5 229 aaPredicted RBP12.57□□□□□ -0.4
RER1-207ENST00000488353 ABHD6Q9BV23 337 aa12.57□□□□□ -0.4
RER1-207ENST00000488353 EMC9Q9Y3B6 208 aa12.57□□□□□ -0.4
RER1-207ENST00000488353 R4GMQ9 66 aa12.57□□□□□ -0.4
RER1-207ENST00000488353 UNC13CQ8NB66 2214 aa12.57□□□□□ -0.4
RER1-207ENST00000488353 LILRA5A6NI73 299 aa12.56□□□□□ -0.4
RER1-207ENST00000488353 FIGNL2A6NMB9 653 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms