RNA–Protein interactions for RNA: ENST00000488155.1

NIPAL3-207, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-207ENST00000488155 ZNF454Q8N9F8 522 aa9.35□□□□□ -0.91
NIPAL3-207ENST00000488155 PNLDC1Q8NA58 520 aaKnown RBP9.35□□□□□ -0.91
NIPAL3-207ENST00000488155 SGMS2Q8NHU3 365 aa9.35□□□□□ -0.91
NIPAL3-207ENST00000488155 ITPKCQ96DU7 683 aa9.35□□□□□ -0.91
NIPAL3-207ENST00000488155 RNF170Q96K19 258 aa9.35□□□□□ -0.91
NIPAL3-207ENST00000488155 WDFY2Q96P53 400 aa9.35□□□□□ -0.91
NIPAL3-207ENST00000488155 ZNF747Q9BV97 191 aa9.35□□□□□ -0.91
NIPAL3-207ENST00000488155 WDR13Q9H1Z4 485 aa9.35□□□□□ -0.91
NIPAL3-207ENST00000488155 ZMAT3Q9HA38 289 aaKnown RBP9.35□□□□□ -0.91
NIPAL3-207ENST00000488155 RNPEPL1Q9HAU8 725 aa9.35□□□□□ -0.91
NIPAL3-207ENST00000488155 KIF17Q9P2E2 1029 aa9.35□□□□□ -0.91
NIPAL3-207ENST00000488155 DNAJB9Q9UBS3 223 aa9.35□□□□□ -0.91
NIPAL3-207ENST00000488155 LAMP5Q9UJQ1 280 aa9.35□□□□□ -0.91
NIPAL3-207ENST00000488155 POMPQ9Y244 141 aa9.35□□□□□ -0.91
NIPAL3-207ENST00000488155 LRP12Q9Y561 859 aa9.35□□□□□ -0.91
NIPAL3-207ENST00000488155 TCRBV3S1A0A5B6 114 aa9.34□□□□□ -0.91
NIPAL3-207ENST00000488155 FAM181BA6NEQ2 426 aa9.34□□□□□ -0.91
NIPAL3-207ENST00000488155 H0YHG0 523 aa9.34□□□□□ -0.91
NIPAL3-207ENST00000488155 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.34□□□□□ -0.91
NIPAL3-207ENST00000488155 M0R129 80 aa9.34□□□□□ -0.91
NIPAL3-207ENST00000488155 PRODHO43272 600 aa9.34□□□□□ -0.91
NIPAL3-207ENST00000488155 AKR7A2O43488 359 aa9.34□□□□□ -0.91
NIPAL3-207ENST00000488155 CIB2O75838 187 aa9.34□□□□□ -0.91
NIPAL3-207ENST00000488155 LIPFP07098 398 aa9.34□□□□□ -0.91
NIPAL3-207ENST00000488155 ALOX5APP20292 161 aa9.34□□□□□ -0.91
NIPAL3-207ENST00000488155 SLC2A5P22732 501 aa9.34□□□□□ -0.91
NIPAL3-207ENST00000488155 CRISP1P54107 249 aa9.34□□□□□ -0.91
NIPAL3-207ENST00000488155 DLX1P56177 255 aa9.34□□□□□ -0.91
NIPAL3-207ENST00000488155 PSMA6P60900 246 aaKnown RBP9.34□□□□□ -0.91
NIPAL3-207ENST00000488155 FIP1L1Q6UN15 594 aaKnown RBP9.34□□□□□ -0.91
NIPAL3-207ENST00000488155 BCDIN3DQ7Z5W3 292 aaKnown RBP9.34□□□□□ -0.91
NIPAL3-207ENST00000488155 COMMD2Q86X83 199 aa9.34□□□□□ -0.91
NIPAL3-207ENST00000488155 FAM81AQ8TBF8 368 aa9.34□□□□□ -0.91
NIPAL3-207ENST00000488155 PPP1R14AQ96A00 147 aa9.34□□□□□ -0.91
NIPAL3-207ENST00000488155 TMIGD2Q96BF3 282 aa9.34□□□□□ -0.91
NIPAL3-207ENST00000488155 PKP2Q99959 881 aa9.34□□□□□ -0.91
NIPAL3-207ENST00000488155 RTL8AQ9BWD3 113 aa9.34□□□□□ -0.91
NIPAL3-207ENST00000488155 TEX12Q9BXU0 123 aa9.34□□□□□ -0.91
NIPAL3-207ENST00000488155 CADM1Q9BY67 442 aaKnown RBP9.34□□□□□ -0.91
NIPAL3-207ENST00000488155 FGF23Q9GZV9 251 aaPredicted RBP9.34□□□□□ -0.91
NIPAL3-207ENST00000488155 SIRPDQ9H106 197 aa9.34□□□□□ -0.91
NIPAL3-207ENST00000488155 YY1AP1Q9H869 796 aa9.34□□□□□ -0.91
NIPAL3-207ENST00000488155 SLC25A19Q9HC21 320 aa9.34□□□□□ -0.91
NIPAL3-207ENST00000488155 ONECUT1Q9UBC0 465 aa9.34□□□□□ -0.91
NIPAL3-207ENST00000488155 COPS3Q9UNS2 423 aa9.34□□□□□ -0.91
NIPAL3-207ENST00000488155 TMEM269A0A1B0GVZ9 245 aa9.33□□□□□ -0.92
NIPAL3-207ENST00000488155 A0A1W2PRD5 423 aa9.33□□□□□ -0.92
NIPAL3-207ENST00000488155 A0A1W2PRF3 423 aa9.33□□□□□ -0.92
NIPAL3-207ENST00000488155 A0A1W2PRM7 423 aa9.33□□□□□ -0.92
NIPAL3-207ENST00000488155 CCDC182A6NF36 153 aa9.33□□□□□ -0.92
NIPAL3-207ENST00000488155 PRR32B1ATL7 298 aa9.33□□□□□ -0.92
NIPAL3-207ENST00000488155 SRRM5B3KS81 715 aa9.33□□□□□ -0.92
NIPAL3-207ENST00000488155 CLDN34H7C241 214 aa9.33□□□□□ -0.92
NIPAL3-207ENST00000488155 MAGEB4O15481 346 aaPredicted RBP9.33□□□□□ -0.92
NIPAL3-207ENST00000488155 NDUFB3O43676 98 aa9.33□□□□□ -0.92
NIPAL3-207ENST00000488155 MITFO75030 526 aaPredicted RBP9.33□□□□□ -0.92
NIPAL3-207ENST00000488155 MUC1P15941 1255 aaPredicted RBP9.33□□□□□ -0.92
NIPAL3-207ENST00000488155 AMY2BP19961 511 aa9.33□□□□□ -0.92
NIPAL3-207ENST00000488155 DAPP51397 102 aa9.33□□□□□ -0.92
NIPAL3-207ENST00000488155 IL5RAQ01344 420 aa9.33□□□□□ -0.92
NIPAL3-207ENST00000488155 CEP78Q5JTW2 689 aa9.33□□□□□ -0.92
NIPAL3-207ENST00000488155 SLC35D3Q5M8T2 416 aa9.33□□□□□ -0.92
NIPAL3-207ENST00000488155 SHISA2Q6UWI4 295 aa9.33□□□□□ -0.92
NIPAL3-207ENST00000488155 Q6YL49 198 aa9.33□□□□□ -0.92
NIPAL3-207ENST00000488155 RHOUQ7L0Q8 258 aa9.33□□□□□ -0.92
NIPAL3-207ENST00000488155 SLC36A1Q7Z2H8 476 aa9.33□□□□□ -0.92
NIPAL3-207ENST00000488155 VMO1Q7Z5L0 202 aa9.33□□□□□ -0.92
NIPAL3-207ENST00000488155 ZDHHC23Q8IYP9 409 aa9.33□□□□□ -0.92
NIPAL3-207ENST00000488155 GALNT4Q8N4A0 578 aa9.33□□□□□ -0.92
NIPAL3-207ENST00000488155 FTMTQ8N4E7 242 aa9.33□□□□□ -0.92
NIPAL3-207ENST00000488155 SCCPDHQ8NBX0 429 aa9.33□□□□□ -0.92
NIPAL3-207ENST00000488155 HPSE2Q8WWQ2 592 aa9.33□□□□□ -0.92
NIPAL3-207ENST00000488155 GATAD2BQ8WXI9 593 aa9.33□□□□□ -0.92
NIPAL3-207ENST00000488155 OR5P3Q8WZ94 311 aa9.33□□□□□ -0.92
NIPAL3-207ENST00000488155 H1FXQ92522 213 aaKnown RBP9.33□□□□□ -0.92
NIPAL3-207ENST00000488155 FAM71F1Q96KD3 344 aaPredicted RBP9.33□□□□□ -0.92
NIPAL3-207ENST00000488155 TEAD3Q99594 435 aa9.33□□□□□ -0.92
NIPAL3-207ENST00000488155 CHIAQ9BZP6 476 aa9.33□□□□□ -0.92
NIPAL3-207ENST00000488155 SEMA6AQ9H2E6 1030 aa9.33□□□□□ -0.92
NIPAL3-207ENST00000488155 RGCCQ9H4X1 137 aa9.33□□□□□ -0.92
NIPAL3-207ENST00000488155 NIPAL2Q9H841 368 aa9.33□□□□□ -0.92
NIPAL3-207ENST00000488155 CNTD2Q9H8S5 307 aa9.33□□□□□ -0.92
NIPAL3-207ENST00000488155 SIRT7Q9NRC8 400 aa9.33□□□□□ -0.92
NIPAL3-207ENST00000488155 PAPOLBQ9NRJ5 636 aaKnown RBP9.33□□□□□ -0.92
NIPAL3-207ENST00000488155 ACOXLQ9NUZ1 547 aa9.33□□□□□ -0.92
NIPAL3-207ENST00000488155 HAO2Q9NYQ3 351 aa9.33□□□□□ -0.92
NIPAL3-207ENST00000488155 KAAG1Q9UBP8 84 aa9.33□□□□□ -0.92
NIPAL3-207ENST00000488155 RPUSD1Q9UJJ7 312 aaKnown RBP9.33□□□□□ -0.92
NIPAL3-207ENST00000488155 ZNF391Q9UJN7 358 aa9.33□□□□□ -0.92
NIPAL3-207ENST00000488155 IKZF2Q9UKS7 526 aa9.33□□□□□ -0.92
NIPAL3-207ENST00000488155 GTF2A1LQ9UNN4 478 aa9.33□□□□□ -0.92
NIPAL3-207ENST00000488155 RRP15Q9Y3B9 282 aaKnown RBP9.33□□□□□ -0.92
NIPAL3-207ENST00000488155 MPC1Q9Y5U8 109 aa9.33□□□□□ -0.92
NIPAL3-207ENST00000488155 IGHV1-69DA0A0B4J2H0 117 aa9.32□□□□□ -0.92
NIPAL3-207ENST00000488155 A0A0U1RQK1 487 aa9.32□□□□□ -0.92
NIPAL3-207ENST00000488155 ZNF732B4DXR9 585 aa9.32□□□□□ -0.92
NIPAL3-207ENST00000488155 PRKYO43930 277 aa9.32□□□□□ -0.92
NIPAL3-207ENST00000488155 RHBDL1O75783 438 aa9.32□□□□□ -0.92
NIPAL3-207ENST00000488155 ECDO95905 644 aaPredicted RBP9.32□□□□□ -0.92
NIPAL3-207ENST00000488155 CST4P01036 141 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms