RNA–Protein interactions for RNA: ENST00000488017.1

SMC4-220, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-220ENST00000488017 EVC2Q86UK5 1308 aa0.97□□□□□ -2.25
SMC4-220ENST00000488017 SERTM2A0A1B0GWG4 89 aa0.97□□□□□ -2.25
SMC4-220ENST00000488017 ZNF878C9JN71 531 aa0.97□□□□□ -2.25
SMC4-220ENST00000488017 RNF113AO15541 343 aaKnown RBP0.97□□□□□ -2.25
SMC4-220ENST00000488017 NEMFO60524 1076 aa0.97□□□□□ -2.25
SMC4-220ENST00000488017 SLC16A7O60669 478 aa0.97□□□□□ -2.25
SMC4-220ENST00000488017 E2F6O75461 281 aa0.97□□□□□ -2.25
SMC4-220ENST00000488017 GATBO75879 557 aaKnown RBP0.97□□□□□ -2.25
SMC4-220ENST00000488017 TDP2O95551 362 aa0.97□□□□□ -2.25
SMC4-220ENST00000488017 HLA-HP01893 362 aa0.97□□□□□ -2.25
SMC4-220ENST00000488017 IDH2P48735 452 aaKnown RBP0.97□□□□□ -2.25
SMC4-220ENST00000488017 GTF2A1P52655 376 aaPredicted RBP0.97□□□□□ -2.25
SMC4-220ENST00000488017 TAS2R43P59537 309 aa0.97□□□□□ -2.25
SMC4-220ENST00000488017 B2MP61769 119 aa0.97□□□□□ -2.25
SMC4-220ENST00000488017 TRDNQ13061 729 aa0.97□□□□□ -2.25
SMC4-220ENST00000488017 TMED1Q13445 227 aa0.97□□□□□ -2.25
SMC4-220ENST00000488017 NAB1Q13506 487 aa0.97□□□□□ -2.25
SMC4-220ENST00000488017 MAD2L1BPQ15013 274 aaPredicted RBP0.97□□□□□ -2.25
SMC4-220ENST00000488017 GABRA6Q16445 453 aa0.97□□□□□ -2.25
SMC4-220ENST00000488017 C6orf99Q4VX62 202 aa0.97□□□□□ -2.25
SMC4-220ENST00000488017 CAVIN4Q5BKX8 364 aa0.97□□□□□ -2.25
SMC4-220ENST00000488017 HHATQ5VTY9 493 aa0.97□□□□□ -2.25
SMC4-220ENST00000488017 TMEM236Q5W0B7 351 aa0.97□□□□□ -2.25
SMC4-220ENST00000488017 KDM4DQ6B0I6 523 aa0.97□□□□□ -2.25
SMC4-220ENST00000488017 FAM173BQ6P4H8 233 aa0.97□□□□□ -2.25
SMC4-220ENST00000488017 WDR82Q6UXN9 313 aa0.97□□□□□ -2.25
SMC4-220ENST00000488017 Q6ZSR6 202 aa0.97□□□□□ -2.25
SMC4-220ENST00000488017 RAB43Q86YS6 212 aa0.97□□□□□ -2.25
SMC4-220ENST00000488017 SGPP2Q8IWX5 399 aa0.97□□□□□ -2.25
SMC4-220ENST00000488017 ZNF680Q8NEM1 530 aa0.97□□□□□ -2.25
SMC4-220ENST00000488017 BPIFCQ8NFQ6 507 aa0.97□□□□□ -2.25
SMC4-220ENST00000488017 OR2Z1Q8NG97 314 aa0.97□□□□□ -2.25
SMC4-220ENST00000488017 SUN5Q8TC36 379 aa0.97□□□□□ -2.25
SMC4-220ENST00000488017 CA5BP1Q8WTZ4 195 aa0.97□□□□□ -2.25
SMC4-220ENST00000488017 DCAKDQ8WVC6 231 aa0.97□□□□□ -2.25
SMC4-220ENST00000488017 TSEN15Q8WW01 171 aaKnown RBP0.97□□□□□ -2.25
SMC4-220ENST00000488017 CDS1Q92903 461 aa0.97□□□□□ -2.25
SMC4-220ENST00000488017 KCNS3Q9BQ31 491 aa0.97□□□□□ -2.25
SMC4-220ENST00000488017 CALN1Q9BXU9 219 aa0.97□□□□□ -2.25
SMC4-220ENST00000488017 TOLLIPQ9H0E2 274 aa0.97□□□□□ -2.25
SMC4-220ENST00000488017 ELOVL6Q9H5J4 265 aa0.97□□□□□ -2.25
SMC4-220ENST00000488017 LYRM4Q9HD34 91 aa0.97□□□□□ -2.25
SMC4-220ENST00000488017 FBXO8Q9NRD0 319 aa0.97□□□□□ -2.25
SMC4-220ENST00000488017 MYEF2Q9P2K5 600 aaKnown RBP0.97□□□□□ -2.25
SMC4-220ENST00000488017 TBC1D24Q9ULP9 559 aa0.97□□□□□ -2.25
SMC4-220ENST00000488017 YARS2Q9Y2Z4 477 aaKnown RBP0.97□□□□□ -2.25
SMC4-220ENST00000488017 HES2Q9Y543 173 aa0.97□□□□□ -2.25
SMC4-220ENST00000488017 MYH11P35749 1972 aa0.97□□□□□ -2.25
SMC4-220ENST00000488017 C2orf16Q68DN1 1984 aa0.97□□□□□ -2.25
SMC4-220ENST00000488017 RPRD2Q5VT52 1461 aaKnown RBP0.97□□□□□ -2.25
SMC4-220ENST00000488017 MYH13Q9UKX3 1938 aa0.97□□□□□ -2.25
SMC4-220ENST00000488017 PTPRGP23470 1445 aa0.97□□□□□ -2.25
SMC4-220ENST00000488017 PHLPP2Q6ZVD8 1323 aa0.96□□□□□ -2.26
SMC4-220ENST00000488017 SETD1AO15047 1707 aaKnown RBP0.96□□□□□ -2.26
SMC4-220ENST00000488017 CCL15-CCL14A0A0B4J2E2 113 aa0.96□□□□□ -2.26
SMC4-220ENST00000488017 IGKV1-6A0A0C4DH72 117 aa0.96□□□□□ -2.26
SMC4-220ENST00000488017 LOC105371267A0A1B0GV96 52 aa0.96□□□□□ -2.26
SMC4-220ENST00000488017 PRAMEF26H0Y7S4 382 aa0.96□□□□□ -2.26
SMC4-220ENST00000488017 ZBTB5O15062 677 aa0.96□□□□□ -2.26
SMC4-220ENST00000488017 OR7C2O60412 319 aa0.96□□□□□ -2.26
SMC4-220ENST00000488017 DEDDO75618 318 aa0.96□□□□□ -2.26
SMC4-220ENST00000488017 SCO1O75880 301 aa0.96□□□□□ -2.26
SMC4-220ENST00000488017 IGLV6-57P01721 117 aa0.96□□□□□ -2.26
SMC4-220ENST00000488017 ASGR1P07306 291 aa0.96□□□□□ -2.26
SMC4-220ENST00000488017 UBCP0CG48 685 aaKnown RBP0.96□□□□□ -2.26
SMC4-220ENST00000488017 OR8G3PP0DMU2 310 aa0.96□□□□□ -2.26
SMC4-220ENST00000488017 HSPD1P10809 573 aaKnown RBP0.96□□□□□ -2.26
SMC4-220ENST00000488017 RAB5AP20339 215 aa0.96□□□□□ -2.26
SMC4-220ENST00000488017 CD9P21926 228 aa0.96□□□□□ -2.26
SMC4-220ENST00000488017 APLNRP35414 380 aa0.96□□□□□ -2.26
SMC4-220ENST00000488017 MPV17P39210 176 aa0.96□□□□□ -2.26
SMC4-220ENST00000488017 RPS5P46782 204 aaKnown RBP0.96□□□□□ -2.26
SMC4-220ENST00000488017 AP1S2P56377 157 aa0.96□□□□□ -2.26
SMC4-220ENST00000488017 RWDD2BP57060 319 aa0.96□□□□□ -2.26
SMC4-220ENST00000488017 SARNPP82979 210 aaKnown RBP0.96□□□□□ -2.26
SMC4-220ENST00000488017 IFITM3Q01628 133 aa0.96□□□□□ -2.26
SMC4-220ENST00000488017 MEF2CQ06413 473 aaPredicted RBP0.96□□□□□ -2.26
SMC4-220ENST00000488017 ZNF33AQ06730 810 aa0.96□□□□□ -2.26
SMC4-220ENST00000488017 ZNF235Q14590 738 aa0.96□□□□□ -2.26
SMC4-220ENST00000488017 CCL15Q16663 113 aa0.96□□□□□ -2.26
SMC4-220ENST00000488017 SP6Q3SY56 376 aa0.96□□□□□ -2.26
SMC4-220ENST00000488017 HCP5Q6MZN7 132 aa0.96□□□□□ -2.26
SMC4-220ENST00000488017 TMPRSS11AQ6ZMR5 421 aa0.96□□□□□ -2.26
SMC4-220ENST00000488017 ADM2Q7Z4H4 148 aa0.96□□□□□ -2.26
SMC4-220ENST00000488017 MTERF4Q7Z6M4 381 aaKnown RBP0.96□□□□□ -2.26
SMC4-220ENST00000488017 UNC93AQ86WB7 457 aa0.96□□□□□ -2.26
SMC4-220ENST00000488017 C8orf31Q8N9H6 132 aa0.96□□□□□ -2.26
SMC4-220ENST00000488017 SPERTQ8NA61 448 aa0.96□□□□□ -2.26
SMC4-220ENST00000488017 MNS1Q8NEH6 495 aa0.96□□□□□ -2.26
SMC4-220ENST00000488017 ERMNQ8TAM6 284 aa0.96□□□□□ -2.26
SMC4-220ENST00000488017 ENKURQ8TC29 256 aa0.96□□□□□ -2.26
SMC4-220ENST00000488017 ASZ1Q8WWH4 475 aa0.96□□□□□ -2.26
SMC4-220ENST00000488017 HGDQ93099 445 aa0.96□□□□□ -2.26
SMC4-220ENST00000488017 TMEM159Q96B96 161 aa0.96□□□□□ -2.26
SMC4-220ENST00000488017 APH1AQ96BI3 265 aa0.96□□□□□ -2.26
SMC4-220ENST00000488017 S100PBPQ96BU1 408 aa0.96□□□□□ -2.26
SMC4-220ENST00000488017 SCGB3A2Q96PL1 93 aa0.96□□□□□ -2.26
SMC4-220ENST00000488017 GPR21Q99679 349 aa0.96□□□□□ -2.26
SMC4-220ENST00000488017 SEC22CQ9BRL7 303 aa0.96□□□□□ -2.26
SMC4-220ENST00000488017 TM2D3Q9BRN9 247 aa0.96□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms