RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 MARCH1Q8TCQ1 289 aa22.93■■□□□ 1.26
HLA-C-208ENST00000487245 SCGB3A2Q96PL1 93 aa22.93■■□□□ 1.26
HLA-C-208ENST00000487245 ZNF385AQ96PM9 386 aaKnown RBP22.93■■□□□ 1.26
HLA-C-208ENST00000487245 ZPBPQ9BS86 351 aa22.93■■□□□ 1.26
HLA-C-208ENST00000487245 LDAHQ9H6V9 325 aa22.93■■□□□ 1.26
HLA-C-208ENST00000487245 COQ3Q9NZJ6 369 aa22.93■■□□□ 1.26
HLA-C-208ENST00000487245 G3V3Y1 287 aa22.92■■□□□ 1.26
HLA-C-208ENST00000487245 CRHP06850 196 aa22.92■■□□□ 1.26
HLA-C-208ENST00000487245 VAMP1P23763 118 aa22.92■■□□□ 1.26
HLA-C-208ENST00000487245 THBS4P35443 961 aa22.92■■□□□ 1.26
HLA-C-208ENST00000487245 STARP49675 285 aa22.92■■□□□ 1.26
HLA-C-208ENST00000487245 LUMP51884 338 aaPredicted RBP22.92■■□□□ 1.26
HLA-C-208ENST00000487245 ECH1Q13011 328 aa22.92■■□□□ 1.26
HLA-C-208ENST00000487245 PHYHD1Q5SRE7 291 aa22.92■■□□□ 1.26
HLA-C-208ENST00000487245 NSUN5P2Q63ZY6 315 aa22.92■■□□□ 1.26
HLA-C-208ENST00000487245 PPP1R32Q7Z5V6 425 aa22.92■■□□□ 1.26
HLA-C-208ENST00000487245 NABP1Q96AH0 204 aa22.92■■□□□ 1.26
HLA-C-208ENST00000487245 SPACA5Q96QH8 159 aa22.92■■□□□ 1.26
HLA-C-208ENST00000487245 UCN2Q96RP3 112 aa22.92■■□□□ 1.26
HLA-C-208ENST00000487245 IGKV1-9A0A0C4DH69 117 aa22.92■■□□□ 1.26
HLA-C-208ENST00000487245 FOXI3A8MTJ6 420 aaPredicted RBP22.92■■□□□ 1.26
HLA-C-208ENST00000487245 AKR1C4P17516 323 aa22.92■■□□□ 1.26
HLA-C-208ENST00000487245 RAC3P60763 192 aa22.92■■□□□ 1.26
HLA-C-208ENST00000487245 PXDC1Q5TGL8 231 aa22.92■■□□□ 1.26
HLA-C-208ENST00000487245 C6orf15Q6UXA7 325 aaPredicted RBP22.92■■□□□ 1.26
HLA-C-208ENST00000487245 PEG10Q86TG7 708 aaKnown RBP22.92■■□□□ 1.26
HLA-C-208ENST00000487245 C20orf196Q8IYI0 205 aa22.92■■□□□ 1.26
HLA-C-208ENST00000487245 STPG2Q8N412 459 aa22.92■■□□□ 1.26
HLA-C-208ENST00000487245 INO80EQ8NBZ0 244 aaPredicted RBP22.92■■□□□ 1.26
HLA-C-208ENST00000487245 FOXD3Q9UJU5 478 aaPredicted RBP22.92■■□□□ 1.26
HLA-C-208ENST00000487245 TCFL5Q9UL49 500 aa22.92■■□□□ 1.26
HLA-C-208ENST00000487245 IGHV3-15A0A0B4J1V0 119 aa22.91■■□□□ 1.26
HLA-C-208ENST00000487245 PSMB6P28072 239 aa22.91■■□□□ 1.26
HLA-C-208ENST00000487245 SSPNQ14714 243 aa22.91■■□□□ 1.26
HLA-C-208ENST00000487245 LRRC37A5PQ49AS3 106 aa22.91■■□□□ 1.26
HLA-C-208ENST00000487245 CASTOR1Q8WTX7 329 aa22.91■■□□□ 1.26
HLA-C-208ENST00000487245 ARPC5LQ9BPX5 153 aa22.91■■□□□ 1.26
HLA-C-208ENST00000487245 ZNF471Q9BX82 626 aaPredicted RBP22.91■■□□□ 1.26
HLA-C-208ENST00000487245 TNFSF11O14788 317 aa22.9■■□□□ 1.26
HLA-C-208ENST00000487245 SMAD9O15198 467 aaKnown RBP22.9■■□□□ 1.26
HLA-C-208ENST00000487245 RAD51DO75771 328 aa22.9■■□□□ 1.26
HLA-C-208ENST00000487245 NAT2P11245 290 aa22.9■■□□□ 1.26
HLA-C-208ENST00000487245 PRKACBP22694 351 aa22.9■■□□□ 1.26
HLA-C-208ENST00000487245 ANOS1P23352 680 aa22.9■■□□□ 1.26
HLA-C-208ENST00000487245 FPR2P25090 351 aa22.9■■□□□ 1.26
HLA-C-208ENST00000487245 PAN3Q58A45 887 aaKnown RBP22.9■■□□□ 1.26
HLA-C-208ENST00000487245 H3F3CQ6NXT2 135 aa22.9■■□□□ 1.26
HLA-C-208ENST00000487245 KCTD9Q7L273 389 aa22.9■■□□□ 1.26
HLA-C-208ENST00000487245 LHFPL1Q86WI0 220 aa22.9■■□□□ 1.26
HLA-C-208ENST00000487245 ZIC4Q8N9L1 334 aa22.9■■□□□ 1.26
HLA-C-208ENST00000487245 PNLDC1Q8NA58 520 aaKnown RBP22.9■■□□□ 1.26
HLA-C-208ENST00000487245 STOML3Q8TAV4 291 aa22.9■■□□□ 1.26
HLA-C-208ENST00000487245 C10orf35Q96D05 121 aa22.9■■□□□ 1.26
HLA-C-208ENST00000487245 RBM24Q9BX46 236 aaKnown RBP22.9■■□□□ 1.26
HLA-C-208ENST00000487245 ULBP2Q9BZM5 246 aa22.9■■□□□ 1.26
HLA-C-208ENST00000487245 OR10A2Q9H208 303 aa22.9■■□□□ 1.26
HLA-C-208ENST00000487245 MBD2Q9UBB5 411 aa22.9■■□□□ 1.26
HLA-C-208ENST00000487245 V9GYS6 101 aa22.9■■□□□ 1.26
HLA-C-208ENST00000487245 FAM25EA8MYX2 175 aa22.9■■□□□ 1.26
HLA-C-208ENST00000487245 F8VVB4 439 aa22.9■■□□□ 1.26
HLA-C-208ENST00000487245 F8VWA3 439 aa22.9■■□□□ 1.26
HLA-C-208ENST00000487245 CA11O75493 328 aa22.9■■□□□ 1.26
HLA-C-208ENST00000487245 SFT2D2O95562 160 aa22.9■■□□□ 1.26
HLA-C-208ENST00000487245 CNR1P21554 472 aa22.9■■□□□ 1.26
HLA-C-208ENST00000487245 OTX2P32243 289 aa22.9■■□□□ 1.26
HLA-C-208ENST00000487245 B3GALT5-AS1P59052 145 aa22.9■■□□□ 1.26
HLA-C-208ENST00000487245 MRPS34P82930 218 aaKnown RBP22.9■■□□□ 1.26
HLA-C-208ENST00000487245 SNTB1Q13884 538 aaKnown RBP22.9■■□□□ 1.26
HLA-C-208ENST00000487245 ZNF468Q5VIY5 522 aaPredicted RBP22.9■■□□□ 1.26
HLA-C-208ENST00000487245 DBX2Q6ZNG2 339 aa22.9■■□□□ 1.26
HLA-C-208ENST00000487245 GPER1Q99527 375 aa22.9■■□□□ 1.26
HLA-C-208ENST00000487245 STRADBQ9C0K7 418 aa22.9■■□□□ 1.26
HLA-C-208ENST00000487245 BANF2Q9H503 90 aa22.9■■□□□ 1.26
HLA-C-208ENST00000487245 CHMP1AQ9HD42 196 aaPredicted RBP22.9■■□□□ 1.26
HLA-C-208ENST00000487245 LOXL2Q9Y4K0 774 aa22.9■■□□□ 1.26
HLA-C-208ENST00000487245 FLVCR1Q9Y5Y0 555 aa22.9■■□□□ 1.26
HLA-C-208ENST00000487245 CRTAPO75718 401 aaPredicted RBP22.89■■□□□ 1.25
HLA-C-208ENST00000487245 SERPINF1P36955 418 aa22.89■■□□□ 1.25
HLA-C-208ENST00000487245 BTN1A1Q13410 526 aa22.89■■□□□ 1.25
HLA-C-208ENST00000487245 CRIP3Q6Q6R5 217 aa22.89■■□□□ 1.25
HLA-C-208ENST00000487245 TMEM17Q86X19 198 aa22.89■■□□□ 1.25
HLA-C-208ENST00000487245 TMEM230Q96A57 120 aa22.89■■□□□ 1.25
HLA-C-208ENST00000487245 ARHGAP5-AS1Q96IT6 56 aa22.89■■□□□ 1.25
HLA-C-208ENST00000487245 ZNF75AQ96N20 296 aa22.89■■□□□ 1.25
HLA-C-208ENST00000487245 C5orf66Q9H5L9 145 aa22.89■■□□□ 1.25
HLA-C-208ENST00000487245 RAB18Q9NP72 206 aa22.89■■□□□ 1.25
HLA-C-208ENST00000487245 TEX13DA0A0J9YY54 714 aaPredicted RBP22.88■■□□□ 1.25
HLA-C-208ENST00000487245 OTX1P32242 354 aaPredicted RBP22.88■■□□□ 1.25
HLA-C-208ENST00000487245 GFOD2Q3B7J2 385 aa22.88■■□□□ 1.25
HLA-C-208ENST00000487245 FAM27BQ5VT28 67 aa22.88■■□□□ 1.25
HLA-C-208ENST00000487245 OR5H2Q8NGV7 314 aa22.88■■□□□ 1.25
HLA-C-208ENST00000487245 RHBDD1Q8TEB9 315 aa22.88■■□□□ 1.25
HLA-C-208ENST00000487245 PP6455Q8WZ26 134 aa22.88■■□□□ 1.25
HLA-C-208ENST00000487245 SPTSSAQ969W0 71 aa22.88■■□□□ 1.25
HLA-C-208ENST00000487245 LYZL4Q96KX0 146 aa22.88■■□□□ 1.25
HLA-C-208ENST00000487245 MRPS18CQ9Y3D5 142 aaKnown RBP22.88■■□□□ 1.25
HLA-C-208ENST00000487245 EEF1E1-BLOC1S5C9J1V9 151 aa22.88■■□□□ 1.25
HLA-C-208ENST00000487245 DHRS3O75911 302 aa22.88■■□□□ 1.25
HLA-C-208ENST00000487245 LYL1P12980 280 aa22.88■■□□□ 1.25
HLA-C-208ENST00000487245 TCN2P20062 427 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms