RNA–Protein interactions for RNA: ENST00000487091.1

CLIP2-206, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 989 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-206ENST00000487091 TOX4O94842 621 aa15.81■□□□□ 0.12
CLIP2-206ENST00000487091 HCCSP53701 268 aa15.81■□□□□ 0.12
CLIP2-206ENST00000487091 ROM1Q03395 351 aa15.81■□□□□ 0.12
CLIP2-206ENST00000487091 POU4F2Q12837 409 aa15.81■□□□□ 0.12
CLIP2-206ENST00000487091 ATP6AP1Q15904 470 aa15.81■□□□□ 0.12
CLIP2-206ENST00000487091 BTN2A1Q7KYR7 527 aa15.81■□□□□ 0.12
CLIP2-206ENST00000487091 ASB17Q8WXJ9 295 aa15.81■□□□□ 0.12
CLIP2-206ENST00000487091 WDFY2Q96P53 400 aa15.81■□□□□ 0.12
CLIP2-206ENST00000487091 PKP2Q99959 881 aa15.81■□□□□ 0.12
CLIP2-206ENST00000487091 PCGF1Q9BSM1 259 aa15.81■□□□□ 0.12
CLIP2-206ENST00000487091 MROQ9BYG7 248 aa15.81■□□□□ 0.12
CLIP2-206ENST00000487091 TMEM269A0A1B0GVZ9 245 aa15.8■□□□□ 0.12
CLIP2-206ENST00000487091 ATP5HO75947 161 aa15.8■□□□□ 0.12
CLIP2-206ENST00000487091 SFTPBP07988 381 aa15.8■□□□□ 0.12
CLIP2-206ENST00000487091 ATP6V1B1P15313 513 aa15.8■□□□□ 0.12
CLIP2-206ENST00000487091 MAP2K3P46734 347 aa15.8■□□□□ 0.12
CLIP2-206ENST00000487091 WDR38Q5JTN6 314 aa15.8■□□□□ 0.12
CLIP2-206ENST00000487091 METTL11BQ5VVY1 283 aa15.8■□□□□ 0.12
CLIP2-206ENST00000487091 BRD3OSQ6XYD6 125 aa15.8■□□□□ 0.12
CLIP2-206ENST00000487091 SLC36A1Q7Z2H8 476 aa15.8■□□□□ 0.12
CLIP2-206ENST00000487091 ZNF679Q8IYX0 411 aa15.8■□□□□ 0.12
CLIP2-206ENST00000487091 PIGCQ92535 297 aa15.8■□□□□ 0.12
CLIP2-206ENST00000487091 RNF170Q96K19 258 aa15.8■□□□□ 0.12
CLIP2-206ENST00000487091 DMRTB1Q96MA1 342 aa15.8■□□□□ 0.12
CLIP2-206ENST00000487091 OR8B4Q96RC9 309 aa15.8■□□□□ 0.12
CLIP2-206ENST00000487091 TBX15Q96SF7 602 aa15.8■□□□□ 0.12
CLIP2-206ENST00000487091 SIRPDQ9H106 197 aa15.8■□□□□ 0.12
CLIP2-206ENST00000487091 FAM206AQ9NX38 181 aa15.8■□□□□ 0.12
CLIP2-206ENST00000487091 G3V2T6 193 aa15.79■□□□□ 0.12
CLIP2-206ENST00000487091 GPR37O15354 613 aa15.79■□□□□ 0.12
CLIP2-206ENST00000487091 PRKYO43930 277 aa15.79■□□□□ 0.12
CLIP2-206ENST00000487091 EFNB1P98172 346 aa15.79■□□□□ 0.12
CLIP2-206ENST00000487091 PDCD1Q15116 288 aa15.79■□□□□ 0.12
CLIP2-206ENST00000487091 DEFB112Q30KQ8 113 aa15.79■□□□□ 0.12
CLIP2-206ENST00000487091 ATPAF1Q5TC12 328 aaPredicted RBP15.79■□□□□ 0.12
CLIP2-206ENST00000487091 MEPCEQ7L2J0 689 aaKnown RBP15.79■□□□□ 0.12
CLIP2-206ENST00000487091 ZDHHC23Q8IYP9 409 aa15.79■□□□□ 0.12
CLIP2-206ENST00000487091 SGMS2Q8NHU3 365 aa15.79■□□□□ 0.12
CLIP2-206ENST00000487091 FAM81AQ8TBF8 368 aa15.79■□□□□ 0.12
CLIP2-206ENST00000487091 HPSE2Q8WWQ2 592 aa15.79■□□□□ 0.12
CLIP2-206ENST00000487091 DUS3LQ96G46 650 aaKnown RBP15.79■□□□□ 0.12
CLIP2-206ENST00000487091 HIST1H2AAQ96QV6 131 aa15.79■□□□□ 0.12
CLIP2-206ENST00000487091 CCL13Q99616 98 aa15.79■□□□□ 0.12
CLIP2-206ENST00000487091 DNTTIP1Q9H147 329 aa15.79■□□□□ 0.12
CLIP2-206ENST00000487091 CNTD2Q9H8S5 307 aa15.79■□□□□ 0.12
CLIP2-206ENST00000487091 NOX4Q9NPH5 578 aa15.79■□□□□ 0.12
CLIP2-206ENST00000487091 KRT84Q9NSB2 600 aa15.79■□□□□ 0.12
CLIP2-206ENST00000487091 HAO2Q9NYQ3 351 aa15.79■□□□□ 0.12
CLIP2-206ENST00000487091 RPUSD1Q9UJJ7 312 aaKnown RBP15.79■□□□□ 0.12
CLIP2-206ENST00000487091 CENPVL3A0A0U1RRI6 287 aa15.78■□□□□ 0.12
CLIP2-206ENST00000487091 ZNF816-ZNF321PA0A0X1KG74 233 aa15.78■□□□□ 0.12
CLIP2-206ENST00000487091 ZAR1LA6NP61 321 aa15.78■□□□□ 0.12
CLIP2-206ENST00000487091 MRPL3P09001 348 aaKnown RBP15.78■□□□□ 0.12
CLIP2-206ENST00000487091 FASP25445 335 aa15.78■□□□□ 0.12
CLIP2-206ENST00000487091 TGM4P49221 684 aa15.78■□□□□ 0.12
CLIP2-206ENST00000487091 SLX4IPQ5VYV7 408 aa15.78■□□□□ 0.12
CLIP2-206ENST00000487091 NXNL2Q5VZ03 156 aa15.78■□□□□ 0.12
CLIP2-206ENST00000487091 ZDHHC13Q8IUH4 622 aa15.78■□□□□ 0.12
CLIP2-206ENST00000487091 SCCPDHQ8NBX0 429 aa15.78■□□□□ 0.12
CLIP2-206ENST00000487091 LY6G5BQ8NDX9 201 aa15.78■□□□□ 0.12
CLIP2-206ENST00000487091 ST8SIA4Q92187 359 aa15.78■□□□□ 0.12
CLIP2-206ENST00000487091 RPL3LQ92901 407 aaKnown RBP15.78■□□□□ 0.12
CLIP2-206ENST00000487091 ZDHHC16Q969W1 377 aa15.78■□□□□ 0.12
CLIP2-206ENST00000487091 RAB3IPQ96QF0 476 aaPredicted RBP15.78■□□□□ 0.12
CLIP2-206ENST00000487091 CNN2Q99439 309 aaKnown RBP15.78■□□□□ 0.12
CLIP2-206ENST00000487091 MNTQ99583 582 aa15.78■□□□□ 0.12
CLIP2-206ENST00000487091 ZNF747Q9BV97 191 aa15.78■□□□□ 0.12
CLIP2-206ENST00000487091 FGF23Q9GZV9 251 aaPredicted RBP15.78■□□□□ 0.12
CLIP2-206ENST00000487091 H2AFY2Q9P0M6 372 aaPredicted RBP15.78■□□□□ 0.12
CLIP2-206ENST00000487091 COPS3Q9UNS2 423 aa15.78■□□□□ 0.12
CLIP2-206ENST00000487091 AP4S1Q9Y587 144 aa15.78■□□□□ 0.12
CLIP2-206ENST00000487091 MDFIC2A0A1B0GVS7 189 aa15.77■□□□□ 0.12
CLIP2-206ENST00000487091 SLC22A31A6NKX4 558 aa15.77■□□□□ 0.12
CLIP2-206ENST00000487091 PSMD9O00233 223 aa15.77■□□□□ 0.12
CLIP2-206ENST00000487091 NDUFB3O43676 98 aa15.77■□□□□ 0.12
CLIP2-206ENST00000487091 MITFO75030 526 aaPredicted RBP15.77■□□□□ 0.12
CLIP2-206ENST00000487091 IGLV3-1P01715 115 aa15.77■□□□□ 0.12
CLIP2-206ENST00000487091 AMY2BP19961 511 aa15.77■□□□□ 0.12
CLIP2-206ENST00000487091 RIDAP52758 137 aaKnown RBP15.77■□□□□ 0.12
CLIP2-206ENST00000487091 ARF6P62330 175 aa15.77■□□□□ 0.12
CLIP2-206ENST00000487091 ELF3P78545 371 aaPredicted RBP15.77■□□□□ 0.12
CLIP2-206ENST00000487091 ZNF829Q3KNS6 432 aaPredicted RBP15.77■□□□□ 0.12
CLIP2-206ENST00000487091 CEACAM21Q3KPI0 293 aa15.77■□□□□ 0.12
CLIP2-206ENST00000487091 ZBTB37Q5TC79 503 aa15.77■□□□□ 0.12
CLIP2-206ENST00000487091 AADACL4Q5VUY2 407 aa15.77■□□□□ 0.12
CLIP2-206ENST00000487091 C12orf73Q69YU5 71 aa15.77■□□□□ 0.12
CLIP2-206ENST00000487091 STUMQ69YW2 141 aa15.77■□□□□ 0.12
CLIP2-206ENST00000487091 KDM4DQ6B0I6 523 aa15.77■□□□□ 0.12
CLIP2-206ENST00000487091 C16orf87Q6PH81 154 aa15.77■□□□□ 0.12
CLIP2-206ENST00000487091 Q6YL49 198 aa15.77■□□□□ 0.12
CLIP2-206ENST00000487091 KCTD8Q6ZWB6 473 aa15.77■□□□□ 0.12
CLIP2-206ENST00000487091 TCEANCQ8N8B7 351 aa15.77■□□□□ 0.12
CLIP2-206ENST00000487091 GATAD2BQ8WXI9 593 aa15.77■□□□□ 0.12
CLIP2-206ENST00000487091 SEH1LQ96EE3 360 aa15.77■□□□□ 0.12
CLIP2-206ENST00000487091 FAM71F1Q96KD3 344 aaPredicted RBP15.77■□□□□ 0.12
CLIP2-206ENST00000487091 PBOV1Q9GZY1 135 aa15.77■□□□□ 0.12
CLIP2-206ENST00000487091 GABARAPL1Q9H0R8 117 aa15.77■□□□□ 0.12
CLIP2-206ENST00000487091 DNAJB11Q9UBS4 358 aa15.77■□□□□ 0.12
CLIP2-206ENST00000487091 NUFIP1Q9UHK0 495 aaKnown RBP15.77■□□□□ 0.12
CLIP2-206ENST00000487091 ENOPH1Q9UHY7 261 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms