RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 VCX3AQ9NNX9 186 aa9.68□□□□□ -0.86
NUP50-216ENST00000486184 ZNF281Q9Y2X9 895 aa9.68□□□□□ -0.86
NUP50-216ENST00000486184 NAV2Q8IVL1 2488 aa9.67□□□□□ -0.86
NUP50-216ENST00000486184 IGHV1-69-2A0A0G2JMI3 117 aa9.67□□□□□ -0.86
NUP50-216ENST00000486184 ANKRD61A6NGH8 418 aa9.67□□□□□ -0.86
NUP50-216ENST00000486184 CDC14BO60729 498 aa9.67□□□□□ -0.86
NUP50-216ENST00000486184 NCR1O76036 304 aa9.67□□□□□ -0.86
NUP50-216ENST00000486184 LY6HO94772 140 aa9.67□□□□□ -0.86
NUP50-216ENST00000486184 LALBAP00709 142 aa9.67□□□□□ -0.86
NUP50-216ENST00000486184 HPXP02790 462 aa9.67□□□□□ -0.86
NUP50-216ENST00000486184 PDLIM4P50479 330 aa9.67□□□□□ -0.86
NUP50-216ENST00000486184 DSCR9P59020 149 aa9.67□□□□□ -0.86
NUP50-216ENST00000486184 ACSM1Q08AH1 577 aa9.67□□□□□ -0.86
NUP50-216ENST00000486184 CNN3Q15417 329 aaKnown RBP9.67□□□□□ -0.86
NUP50-216ENST00000486184 YIF1BQ5BJH7 314 aa9.67□□□□□ -0.86
NUP50-216ENST00000486184 CEP78Q5JTW2 689 aa9.67□□□□□ -0.86
NUP50-216ENST00000486184 SHEQ5VZ18 495 aa9.67□□□□□ -0.86
NUP50-216ENST00000486184 DMKNQ6E0U4 476 aaPredicted RBP9.67□□□□□ -0.86
NUP50-216ENST00000486184 ZNF525Q8N782 197 aa9.67□□□□□ -0.86
NUP50-216ENST00000486184 CELF2-AS1Q8N7Q2 184 aa9.67□□□□□ -0.86
NUP50-216ENST00000486184 ZNF485Q8NCK3 441 aa9.67□□□□□ -0.86
NUP50-216ENST00000486184 PP6455Q8WZ26 134 aa9.67□□□□□ -0.86
NUP50-216ENST00000486184 FAM168AQ92567 244 aa9.67□□□□□ -0.86
NUP50-216ENST00000486184 FCGR1BQ92637 280 aa9.67□□□□□ -0.86
NUP50-216ENST00000486184 THRSPQ92748 146 aa9.67□□□□□ -0.86
NUP50-216ENST00000486184 GHSRQ92847 366 aa9.67□□□□□ -0.86
NUP50-216ENST00000486184 MEGF10Q96KG7 1140 aa9.67□□□□□ -0.86
NUP50-216ENST00000486184 TECTBQ96PL2 329 aa9.67□□□□□ -0.86
NUP50-216ENST00000486184 NEK6Q9HC98 313 aa9.67□□□□□ -0.86
NUP50-216ENST00000486184 ACOT13Q9NPJ3 140 aa9.67□□□□□ -0.86
NUP50-216ENST00000486184 DLL4Q9NR61 685 aa9.67□□□□□ -0.86
NUP50-216ENST00000486184 SLC7A11Q9UPY5 501 aa9.67□□□□□ -0.86
NUP50-216ENST00000486184 PPP1R3CQ9UQK1 317 aa9.67□□□□□ -0.86
NUP50-216ENST00000486184 LSM2Q9Y333 95 aaKnown RBP9.67□□□□□ -0.86
NUP50-216ENST00000486184 IGHV3-64DA0A0J9YX35 117 aa9.66□□□□□ -0.86
NUP50-216ENST00000486184 A6NIN4 97 aa9.66□□□□□ -0.86
NUP50-216ENST00000486184 A6NLC8 198 aa9.66□□□□□ -0.86
NUP50-216ENST00000486184 LRRC30A6NM36 301 aa9.66□□□□□ -0.86
NUP50-216ENST00000486184 PLPP2O43688 288 aa9.66□□□□□ -0.86
NUP50-216ENST00000486184 GRPP07492 148 aa9.66□□□□□ -0.86
NUP50-216ENST00000486184 IRF2P14316 349 aa9.66□□□□□ -0.86
NUP50-216ENST00000486184 MAPK3P27361 379 aaPredicted RBP9.66□□□□□ -0.86
NUP50-216ENST00000486184 CD200P41217 278 aa9.66□□□□□ -0.86
NUP50-216ENST00000486184 CRYBB2P43320 205 aa9.66□□□□□ -0.86
NUP50-216ENST00000486184 SOX2P48431 317 aa9.66□□□□□ -0.86
NUP50-216ENST00000486184 MRPS11P82912 194 aaKnown RBP9.66□□□□□ -0.86
NUP50-216ENST00000486184 EMX1Q04741 257 aaPredicted RBP9.66□□□□□ -0.86
NUP50-216ENST00000486184 MLLT11Q13015 90 aaPredicted RBP9.66□□□□□ -0.86
NUP50-216ENST00000486184 CLEC12BQ2HXU8 276 aa9.66□□□□□ -0.86
NUP50-216ENST00000486184 CEACAM21Q3KPI0 293 aa9.66□□□□□ -0.86
NUP50-216ENST00000486184 PRSS57Q6UWY2 283 aa9.66□□□□□ -0.86
NUP50-216ENST00000486184 Q6ZSR3 168 aa9.66□□□□□ -0.86
NUP50-216ENST00000486184 PEG10Q86TG7 708 aaKnown RBP9.66□□□□□ -0.86
NUP50-216ENST00000486184 SPARTQ8N0X7 666 aa9.66□□□□□ -0.86
NUP50-216ENST00000486184 TSPAN14Q8NG11 270 aa9.66□□□□□ -0.86
NUP50-216ENST00000486184 OR51A4Q8NGJ6 313 aa9.66□□□□□ -0.86
NUP50-216ENST00000486184 OR11L1Q8NGX0 322 aa9.66□□□□□ -0.86
NUP50-216ENST00000486184 OR10AC1Q8NH08 325 aa9.66□□□□□ -0.86
NUP50-216ENST00000486184 RPS4Y2Q8TD47 263 aa9.66□□□□□ -0.86
NUP50-216ENST00000486184 HPS1Q92902 700 aa9.66□□□□□ -0.86
NUP50-216ENST00000486184 FGGYQ96C11 551 aa9.66□□□□□ -0.86
NUP50-216ENST00000486184 RNF170Q96K19 258 aa9.66□□□□□ -0.86
NUP50-216ENST00000486184 NR1H4Q96RI1 486 aaPredicted RBP9.66□□□□□ -0.86
NUP50-216ENST00000486184 MGLLQ99685 303 aa9.66□□□□□ -0.86
NUP50-216ENST00000486184 PIMREGQ9BSJ6 248 aa9.66□□□□□ -0.86
NUP50-216ENST00000486184 CHST5Q9GZS9 411 aa9.66□□□□□ -0.86
NUP50-216ENST00000486184 CHODLQ9H9P2 273 aa9.66□□□□□ -0.86
NUP50-216ENST00000486184 FN3KRPQ9HA64 309 aa9.66□□□□□ -0.86
NUP50-216ENST00000486184 ISYNA1Q9NPH2 558 aa9.66□□□□□ -0.86
NUP50-216ENST00000486184 GPR173Q9NS66 373 aa9.66□□□□□ -0.86
NUP50-216ENST00000486184 ZNF275Q9NSD4 429 aaPredicted RBP9.66□□□□□ -0.86
NUP50-216ENST00000486184 SIRT4Q9Y6E7 314 aaPredicted RBP9.66□□□□□ -0.86
NUP50-216ENST00000486184 PDZD2O15018 2839 aa9.66□□□□□ -0.86
NUP50-216ENST00000486184 A0A087WXM4 84 aa9.65□□□□□ -0.86
NUP50-216ENST00000486184 A0A1B0GWJ7 208 aa9.65□□□□□ -0.86
NUP50-216ENST00000486184 OR5B21A6NL26 309 aa9.65□□□□□ -0.86
NUP50-216ENST00000486184 TMEM210A6NLX4 147 aa9.65□□□□□ -0.86
NUP50-216ENST00000486184 CLDN25C9JDP6 229 aa9.65□□□□□ -0.86
NUP50-216ENST00000486184 IFNL4K9M1U5 179 aa9.65□□□□□ -0.86
NUP50-216ENST00000486184 NDUFS8O00217 210 aa9.65□□□□□ -0.86
NUP50-216ENST00000486184 LMX1BO60663 402 aa9.65□□□□□ -0.86
NUP50-216ENST00000486184 CD1AP06126 327 aa9.65□□□□□ -0.86
NUP50-216ENST00000486184 PSMB9P28065 219 aa9.65□□□□□ -0.86
NUP50-216ENST00000486184 GPM6AP51674 278 aa9.65□□□□□ -0.86
NUP50-216ENST00000486184 GNG3P63215 75 aa9.65□□□□□ -0.86
NUP50-216ENST00000486184 GPR50Q13585 617 aa9.65□□□□□ -0.86
NUP50-216ENST00000486184 TRAM1Q15629 374 aa9.65□□□□□ -0.86
NUP50-216ENST00000486184 Q499Y3 187 aa9.65□□□□□ -0.86
NUP50-216ENST00000486184 PRAMEF6Q5VXH4 476 aa9.65□□□□□ -0.86
NUP50-216ENST00000486184 LIPKQ5VXJ0 399 aa9.65□□□□□ -0.86
NUP50-216ENST00000486184 MOGAT3Q86VF5 341 aa9.65□□□□□ -0.86
NUP50-216ENST00000486184 SERPINA12Q8IW75 414 aa9.65□□□□□ -0.86
NUP50-216ENST00000486184 C1orf87Q8N0U7 546 aa9.65□□□□□ -0.86
NUP50-216ENST00000486184 MS4A15Q8N5U1 240 aa9.65□□□□□ -0.86
NUP50-216ENST00000486184 OR5A2Q8NGI9 324 aa9.65□□□□□ -0.86
NUP50-216ENST00000486184 OR5D14Q8NGL3 314 aa9.65□□□□□ -0.86
NUP50-216ENST00000486184 OR5P3Q8WZ94 311 aa9.65□□□□□ -0.86
NUP50-216ENST00000486184 CCL17Q92583 94 aa9.65□□□□□ -0.86
NUP50-216ENST00000486184 ERGIC1Q969X5 290 aa9.65□□□□□ -0.86
NUP50-216ENST00000486184 TMEM106AQ96A25 262 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms