RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 TSPOAP1O95153 1857 aa1.44□□□□□ -2.18
GCFC2-209ENST00000486016 MYO16Q9Y6X6 1858 aa1.44□□□□□ -2.18
GCFC2-209ENST00000486016 A0A0A6YYD5 115 aa1.44□□□□□ -2.18
GCFC2-209ENST00000486016 ARPC4-TTLL3A0A0A6YYG9 625 aa1.44□□□□□ -2.18
GCFC2-209ENST00000486016 A0A0B4J2E0 115 aa1.44□□□□□ -2.18
GCFC2-209ENST00000486016 BTNL10A8MVZ5 291 aa1.44□□□□□ -2.18
GCFC2-209ENST00000486016 H3BN98 237 aa1.44□□□□□ -2.18
GCFC2-209ENST00000486016 M0R1X1 148 aa1.44□□□□□ -2.18
GCFC2-209ENST00000486016 TRBV12-3P01733 135 aa1.44□□□□□ -2.18
GCFC2-209ENST00000486016 HSPD1P10809 573 aaKnown RBP1.44□□□□□ -2.18
GCFC2-209ENST00000486016 SRMP19623 302 aa1.44□□□□□ -2.18
GCFC2-209ENST00000486016 APLNRP35414 380 aa1.44□□□□□ -2.18
GCFC2-209ENST00000486016 PCK1P35558 622 aa1.44□□□□□ -2.18
GCFC2-209ENST00000486016 CFHR2P36980 270 aa1.44□□□□□ -2.18
GCFC2-209ENST00000486016 PSMD4P55036 377 aaKnown RBP1.44□□□□□ -2.18
GCFC2-209ENST00000486016 CMC4P56277 68 aaPredicted RBP1.44□□□□□ -2.18
GCFC2-209ENST00000486016 CLDN6P56747 220 aa1.44□□□□□ -2.18
GCFC2-209ENST00000486016 KDSRQ06136 332 aa1.44□□□□□ -2.18
GCFC2-209ENST00000486016 NAB1Q13506 487 aa1.44□□□□□ -2.18
GCFC2-209ENST00000486016 DMC1Q14565 340 aa1.44□□□□□ -2.18
GCFC2-209ENST00000486016 C6orf99Q4VX62 202 aa1.44□□□□□ -2.18
GCFC2-209ENST00000486016 FAM222AQ5U5X8 452 aa1.44□□□□□ -2.18
GCFC2-209ENST00000486016 MLIPQ5VWP3 458 aa1.44□□□□□ -2.18
GCFC2-209ENST00000486016 TMEM236Q5W0B7 351 aa1.44□□□□□ -2.18
GCFC2-209ENST00000486016 KDM4DQ6B0I6 523 aa1.44□□□□□ -2.18
GCFC2-209ENST00000486016 ULK3Q6PHR2 472 aa1.44□□□□□ -2.18
GCFC2-209ENST00000486016 Q6ZSR6 202 aa1.44□□□□□ -2.18
GCFC2-209ENST00000486016 NDUFAF7Q7L592 441 aa1.44□□□□□ -2.18
GCFC2-209ENST00000486016 ERO1BQ86YB8 467 aa1.44□□□□□ -2.18
GCFC2-209ENST00000486016 SLC30A8Q8IWU4 369 aa1.44□□□□□ -2.18
GCFC2-209ENST00000486016 FAM184AQ8NB25 1140 aa1.44□□□□□ -2.18
GCFC2-209ENST00000486016 ST20-AS1Q8NBB2 130 aa1.44□□□□□ -2.18
GCFC2-209ENST00000486016 OR1L1Q8NH94 360 aa1.44□□□□□ -2.18
GCFC2-209ENST00000486016 ENKURQ8TC29 256 aa1.44□□□□□ -2.18
GCFC2-209ENST00000486016 DCAKDQ8WVC6 231 aa1.44□□□□□ -2.18
GCFC2-209ENST00000486016 RXFP2Q8WXD0 754 aa1.44□□□□□ -2.18
GCFC2-209ENST00000486016 KIAA1143Q96AT1 154 aaPredicted RBP1.44□□□□□ -2.18
GCFC2-209ENST00000486016 FAM19A4Q96LR4 140 aa1.44□□□□□ -2.18
GCFC2-209ENST00000486016 RDH12Q96NR8 316 aa1.44□□□□□ -2.18
GCFC2-209ENST00000486016 EMC6Q9BV81 110 aa1.44□□□□□ -2.18
GCFC2-209ENST00000486016 NUDT9Q9BW91 350 aa1.44□□□□□ -2.18
GCFC2-209ENST00000486016 ZSCAN16Q9H4T2 348 aaPredicted RBP1.44□□□□□ -2.18
GCFC2-209ENST00000486016 DYRK4Q9NR20 520 aa1.44□□□□□ -2.18
GCFC2-209ENST00000486016 ADA2Q9NZK5 511 aa1.44□□□□□ -2.18
GCFC2-209ENST00000486016 ZMAT5Q9UDW3 170 aaKnown RBP1.44□□□□□ -2.18
GCFC2-209ENST00000486016 SIGLEC7Q9Y286 467 aa1.44□□□□□ -2.18
GCFC2-209ENST00000486016 LRRC42Q9Y546 428 aa1.44□□□□□ -2.18
GCFC2-209ENST00000486016 OR51B2Q9Y5P1 312 aa1.44□□□□□ -2.18
GCFC2-209ENST00000486016 SDK2Q58EX2 2172 aa1.44□□□□□ -2.18
GCFC2-209ENST00000486016 IGHV1-3A0A0C4DH29 117 aa1.43□□□□□ -2.18
GCFC2-209ENST00000486016 HACD1B0YJ81 288 aa1.43□□□□□ -2.18
GCFC2-209ENST00000486016 LINC01619G3V211 115 aa1.43□□□□□ -2.18
GCFC2-209ENST00000486016 MANBAO00462 879 aa1.43□□□□□ -2.18
GCFC2-209ENST00000486016 TRDMT1O14717 391 aaKnown RBP1.43□□□□□ -2.18
GCFC2-209ENST00000486016 POLR1CO15160 346 aaPredicted RBP1.43□□□□□ -2.18
GCFC2-209ENST00000486016 PSPHP1O15172 72 aa1.43□□□□□ -2.18
GCFC2-209ENST00000486016 GATBO75879 557 aaKnown RBP1.43□□□□□ -2.18
GCFC2-209ENST00000486016 KLK1P06870 262 aa1.43□□□□□ -2.18
GCFC2-209ENST00000486016 MSR1P21757 451 aa1.43□□□□□ -2.18
GCFC2-209ENST00000486016 CXCR1P25024 350 aa1.43□□□□□ -2.18
GCFC2-209ENST00000486016 TAS2R39P59534 338 aa1.43□□□□□ -2.18
GCFC2-209ENST00000486016 PAFAH1B2P68402 229 aa1.43□□□□□ -2.18
GCFC2-209ENST00000486016 RPL18AQ02543 176 aaKnown RBP1.43□□□□□ -2.18
GCFC2-209ENST00000486016 HADHQ16836 314 aaKnown RBP1.43□□□□□ -2.18
GCFC2-209ENST00000486016 STEAP4Q687X5 459 aa1.43□□□□□ -2.18
GCFC2-209ENST00000486016 LINC00523Q86TU6 105 aa1.43□□□□□ -2.18
GCFC2-209ENST00000486016 DAW1Q8N136 415 aa1.43□□□□□ -2.18
GCFC2-209ENST00000486016 MIR7-3HGQ8N6C7 128 aa1.43□□□□□ -2.18
GCFC2-209ENST00000486016 SLC35G3Q8N808 338 aa1.43□□□□□ -2.18
GCFC2-209ENST00000486016 ZNF321PQ8N8H1 164 aa1.43□□□□□ -2.18
GCFC2-209ENST00000486016 WDR31Q8NA23 367 aa1.43□□□□□ -2.18
GCFC2-209ENST00000486016 OR5T3Q8NGG3 340 aa1.43□□□□□ -2.18
GCFC2-209ENST00000486016 TCP10LQ8TDR4 215 aa1.43□□□□□ -2.18
GCFC2-209ENST00000486016 BAALCQ8WXS3 180 aa1.43□□□□□ -2.18
GCFC2-209ENST00000486016 SFXN3Q9BWM7 321 aa1.43□□□□□ -2.18
GCFC2-209ENST00000486016 PLEKHF2Q9H8W4 249 aa1.43□□□□□ -2.18
GCFC2-209ENST00000486016 CES1P1Q9UKY3 287 aa1.43□□□□□ -2.18
GCFC2-209ENST00000486016 SCN1AP35498 2009 aa1.43□□□□□ -2.18
GCFC2-209ENST00000486016 NEURL4Q96JN8 1562 aa1.42□□□□□ -2.18
GCFC2-209ENST00000486016 PCNX2A6NKB5 2137 aa1.42□□□□□ -2.18
GCFC2-209ENST00000486016 CCL15-CCL14A0A0B4J2E2 113 aa1.42□□□□□ -2.18
GCFC2-209ENST00000486016 LOC100653049A0A140TA62 436 aa1.42□□□□□ -2.18
GCFC2-209ENST00000486016 CENPXA8MT69 81 aa1.42□□□□□ -2.18
GCFC2-209ENST00000486016 KRT34O76011 436 aa1.42□□□□□ -2.18
GCFC2-209ENST00000486016 LCA5LO95447 670 aa1.42□□□□□ -2.18
GCFC2-209ENST00000486016 LHBP01229 141 aa1.42□□□□□ -2.18
GCFC2-209ENST00000486016 PTHP01270 115 aa1.42□□□□□ -2.18
GCFC2-209ENST00000486016 RPN2P04844 631 aa1.42□□□□□ -2.18
GCFC2-209ENST00000486016 GZMAP12544 262 aa1.42□□□□□ -2.18
GCFC2-209ENST00000486016 PRKACAP17612 351 aa1.42□□□□□ -2.18
GCFC2-209ENST00000486016 PRKACBP22694 351 aa1.42□□□□□ -2.18
GCFC2-209ENST00000486016 PSMB5P28074 263 aa1.42□□□□□ -2.18
GCFC2-209ENST00000486016 ARL2P36404 184 aa1.42□□□□□ -2.18
GCFC2-209ENST00000486016 ELF3P78545 371 aaPredicted RBP1.42□□□□□ -2.18
GCFC2-209ENST00000486016 INCA1Q0VD86 236 aa1.42□□□□□ -2.18
GCFC2-209ENST00000486016 FUT5Q11128 374 aa1.42□□□□□ -2.18
GCFC2-209ENST00000486016 WDR43Q15061 677 aaKnown RBP eCLIP1.42□□□□□ -2.18
GCFC2-209ENST00000486016 CCL15Q16663 113 aa1.42□□□□□ -2.18
GCFC2-209ENST00000486016 LUZP6Q538Z0 58 aa1.42□□□□□ -2.18
GCFC2-209ENST00000486016 KLHL12Q53G59 568 aa1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms