RNA–Protein interactions for RNA: ENST00000485980.1

PLXNB3-208, Transcript of plexin B3, humanhuman

TSL 3

Gene PLXNB3, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB3-208ENST00000485980 CDK5R2Q13319 367 aa12.9□□□□□ -0.34
PLXNB3-208ENST00000485980 MED21Q13503 144 aa12.9□□□□□ -0.34
PLXNB3-208ENST00000485980 HLXQ14774 488 aaPredicted RBP12.9□□□□□ -0.34
PLXNB3-208ENST00000485980 TIGD6Q17RP2 521 aa12.9□□□□□ -0.34
PLXNB3-208ENST00000485980 FBXW12Q6X9E4 464 aa12.9□□□□□ -0.34
PLXNB3-208ENST00000485980 PGAP1Q75T13 922 aa12.9□□□□□ -0.34
PLXNB3-208ENST00000485980 CNIH3Q8TBE1 160 aa12.9□□□□□ -0.34
PLXNB3-208ENST00000485980 FBLIM1Q8WUP2 373 aa12.9□□□□□ -0.34
PLXNB3-208ENST00000485980 RAB40AQ8WXH6 277 aa12.9□□□□□ -0.34
PLXNB3-208ENST00000485980 ASB17Q8WXJ9 295 aa12.9□□□□□ -0.34
PLXNB3-208ENST00000485980 ZNF582Q96NG8 517 aaPredicted RBP12.9□□□□□ -0.34
PLXNB3-208ENST00000485980 MNTQ99583 582 aa12.9□□□□□ -0.34
PLXNB3-208ENST00000485980 CHIAQ9BZP6 476 aa12.9□□□□□ -0.34
PLXNB3-208ENST00000485980 POFUT1Q9H488 388 aa12.9□□□□□ -0.34
PLXNB3-208ENST00000485980 OPA3Q9H6K4 179 aa12.9□□□□□ -0.34
PLXNB3-208ENST00000485980 NIPAL2Q9H841 368 aa12.9□□□□□ -0.34
PLXNB3-208ENST00000485980 WARS2Q9UGM6 360 aaKnown RBP12.9□□□□□ -0.34
PLXNB3-208ENST00000485980 IKZF2Q9UKS7 526 aa12.9□□□□□ -0.34
PLXNB3-208ENST00000485980 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.9□□□□□ -0.34
PLXNB3-208ENST00000485980 RNF114Q9Y508 228 aa12.9□□□□□ -0.34
PLXNB3-208ENST00000485980 IGHV2-70DA0A0C4DH43 119 aa12.89□□□□□ -0.35
PLXNB3-208ENST00000485980 XRCC2O43543 280 aa12.89□□□□□ -0.35
PLXNB3-208ENST00000485980 WBP4O75554 376 aaKnown RBP12.89□□□□□ -0.35
PLXNB3-208ENST00000485980 ZNF205O95201 554 aa12.89□□□□□ -0.35
PLXNB3-208ENST00000485980 SLC2A1P11166 492 aa12.89□□□□□ -0.35
PLXNB3-208ENST00000485980 RPS2P15880 293 aaKnown RBP12.89□□□□□ -0.35
PLXNB3-208ENST00000485980 KITLGP21583 273 aa12.89□□□□□ -0.35
PLXNB3-208ENST00000485980 HTR1FP30939 366 aa12.89□□□□□ -0.35
PLXNB3-208ENST00000485980 PSG7Q13046 419 aa12.89□□□□□ -0.35
PLXNB3-208ENST00000485980 GFOD2Q3B7J2 385 aa12.89□□□□□ -0.35
PLXNB3-208ENST00000485980 KRTAP27-1Q3LI81 207 aa12.89□□□□□ -0.35
PLXNB3-208ENST00000485980 SLC35F2Q8IXU6 374 aa12.89□□□□□ -0.35
PLXNB3-208ENST00000485980 OR5AS1Q8N127 324 aa12.89□□□□□ -0.35
PLXNB3-208ENST00000485980 MUC20Q8N307 709 aaPredicted RBP12.89□□□□□ -0.35
PLXNB3-208ENST00000485980 BHLHE23Q8NDY6 225 aa12.89□□□□□ -0.35
PLXNB3-208ENST00000485980 OR51G2Q8NGK0 314 aa12.89□□□□□ -0.35
PLXNB3-208ENST00000485980 APH1BQ8WW43 257 aa12.89□□□□□ -0.35
PLXNB3-208ENST00000485980 SPRYD4Q8WW59 207 aaPredicted RBP12.89□□□□□ -0.35
PLXNB3-208ENST00000485980 ITLN1Q8WWA0 313 aa12.89□□□□□ -0.35
PLXNB3-208ENST00000485980 PGAM5Q96HS1 289 aa12.89□□□□□ -0.35
PLXNB3-208ENST00000485980 MROQ9BYG7 248 aa12.89□□□□□ -0.35
PLXNB3-208ENST00000485980 TCF7L1Q9HCS4 588 aa12.89□□□□□ -0.35
PLXNB3-208ENST00000485980 GGT3PA6NGU5 568 aa12.88□□□□□ -0.35
PLXNB3-208ENST00000485980 TSPAN15O95858 294 aa12.88□□□□□ -0.35
PLXNB3-208ENST00000485980 OTX1P32242 354 aaPredicted RBP12.88□□□□□ -0.35
PLXNB3-208ENST00000485980 OPRL1P41146 370 aa12.88□□□□□ -0.35
PLXNB3-208ENST00000485980 PAX2Q02962 417 aa12.88□□□□□ -0.35
PLXNB3-208ENST00000485980 PDCD1Q15116 288 aa12.88□□□□□ -0.35
PLXNB3-208ENST00000485980 GPR157Q5UAW9 335 aa12.88□□□□□ -0.35
PLXNB3-208ENST00000485980 OR2T2Q6IF00 324 aa12.88□□□□□ -0.35
PLXNB3-208ENST00000485980 Q6YL49 198 aa12.88□□□□□ -0.35
PLXNB3-208ENST00000485980 OR52H1Q8NGJ2 320 aa12.88□□□□□ -0.35
PLXNB3-208ENST00000485980 HAVCR1Q96D42 359 aa12.88□□□□□ -0.35
PLXNB3-208ENST00000485980 SIGLEC11Q96RL6 698 aa12.88□□□□□ -0.35
PLXNB3-208ENST00000485980 TTTY10Q9BZA0 68 aa12.88□□□□□ -0.35
PLXNB3-208ENST00000485980 OR10A2Q9H208 303 aa12.88□□□□□ -0.35
PLXNB3-208ENST00000485980 PRDM13Q9H4Q3 707 aa12.88□□□□□ -0.35
PLXNB3-208ENST00000485980 NOX4Q9NPH5 578 aa12.88□□□□□ -0.35
PLXNB3-208ENST00000485980 BRD7Q9NPI1 651 aa12.88□□□□□ -0.35
PLXNB3-208ENST00000485980 NOP16Q9Y3C1 178 aaKnown RBP12.88□□□□□ -0.35
PLXNB3-208ENST00000485980 TMEM178BH3BS89 294 aa12.87□□□□□ -0.35
PLXNB3-208ENST00000485980 CFL1P23528 166 aaKnown RBP12.87□□□□□ -0.35
PLXNB3-208ENST00000485980 RIDAP52758 137 aaKnown RBP12.87□□□□□ -0.35
PLXNB3-208ENST00000485980 ZNF121P58317 390 aaPredicted RBP12.87□□□□□ -0.35
PLXNB3-208ENST00000485980 PSMA6P60900 246 aaKnown RBP12.87□□□□□ -0.35
PLXNB3-208ENST00000485980 TMED1Q13445 227 aa12.87□□□□□ -0.35
PLXNB3-208ENST00000485980 GK2Q14410 553 aaPredicted RBP12.87□□□□□ -0.35
PLXNB3-208ENST00000485980 SMN1Q16637 294 aaKnown RBP12.87□□□□□ -0.35
PLXNB3-208ENST00000485980 ZNF829Q3KNS6 432 aaPredicted RBP12.87□□□□□ -0.35
PLXNB3-208ENST00000485980 SNAI3Q3KNW1 292 aa12.87□□□□□ -0.35
PLXNB3-208ENST00000485980 C6orf141Q5SZD1 244 aa12.87□□□□□ -0.35
PLXNB3-208ENST00000485980 LAIR2Q6ISS4 152 aa12.87□□□□□ -0.35
PLXNB3-208ENST00000485980 COLCA1Q6ZS62 124 aa12.87□□□□□ -0.35
PLXNB3-208ENST00000485980 FAM57BQ71RH2 274 aa12.87□□□□□ -0.35
PLXNB3-208ENST00000485980 COMMD2Q86X83 199 aa12.87□□□□□ -0.35
PLXNB3-208ENST00000485980 KLBQ86Z14 1044 aa12.87□□□□□ -0.35
PLXNB3-208ENST00000485980 OR10H4Q8NGA5 316 aa12.87□□□□□ -0.35
PLXNB3-208ENST00000485980 OR2AE1Q8NHA4 323 aa12.87□□□□□ -0.35
PLXNB3-208ENST00000485980 OR2V2Q96R30 315 aa12.87□□□□□ -0.35
PLXNB3-208ENST00000485980 AMELYQ99218 206 aa12.87□□□□□ -0.35
PLXNB3-208ENST00000485980 NUDT16L1Q9BRJ7 211 aaKnown RBP12.87□□□□□ -0.35
PLXNB3-208ENST00000485980 ADGRL4Q9HBW9 690 aa12.87□□□□□ -0.35
PLXNB3-208ENST00000485980 IL19Q9UHD0 177 aa12.87□□□□□ -0.35
PLXNB3-208ENST00000485980 GTF2A1LQ9UNN4 478 aa12.87□□□□□ -0.35
PLXNB3-208ENST00000485980 KLHDC2Q9Y2U9 406 aa12.87□□□□□ -0.35
PLXNB3-208ENST00000485980 RPL36Q9Y3U8 105 aaKnown RBP12.87□□□□□ -0.35
PLXNB3-208ENST00000485980 LRP12Q9Y561 859 aa12.87□□□□□ -0.35
PLXNB3-208ENST00000485980 KIR2DS1A0A191URI9 304 aa12.86□□□□□ -0.35
PLXNB3-208ENST00000485980 ALOX5APP20292 161 aa12.86□□□□□ -0.35
PLXNB3-208ENST00000485980 CXCR4P61073 352 aa12.86□□□□□ -0.35
PLXNB3-208ENST00000485980 FGF12P61328 243 aa12.86□□□□□ -0.35
PLXNB3-208ENST00000485980 CSNK2BP67870 215 aa12.86□□□□□ -0.35
PLXNB3-208ENST00000485980 RSPO1Q2MKA7 263 aaPredicted RBP12.86□□□□□ -0.35
PLXNB3-208ENST00000485980 GLYATL3Q5SZD4 288 aa12.86□□□□□ -0.35
PLXNB3-208ENST00000485980 RUSC1-AS1Q66K80 236 aa12.86□□□□□ -0.35
PLXNB3-208ENST00000485980 ZNF322Q6U7Q0 402 aaPredicted RBP12.86□□□□□ -0.35
PLXNB3-208ENST00000485980 Q6ZR03 302 aa12.86□□□□□ -0.35
PLXNB3-208ENST00000485980 FAM220AQ7Z4H9 259 aa12.86□□□□□ -0.35
PLXNB3-208ENST00000485980 NAA40Q86UY6 237 aa12.86□□□□□ -0.35
PLXNB3-208ENST00000485980 FTMTQ8N4E7 242 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms