RNA–Protein interactions for RNA: ENST00000484954.1

VPS50-216, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-216ENST00000484954 ZNF257Q9Y2Q1 563 aa0.92□□□□□ -2.26
VPS50-216ENST00000484954 ZBED9Q6R2W3 1325 aa0.91□□□□□ -2.26
VPS50-216ENST00000484954 TRAV25A0A0B4J276 109 aa0.91□□□□□ -2.26
VPS50-216ENST00000484954 CCL15-CCL14A0A0B4J2E2 113 aa0.91□□□□□ -2.26
VPS50-216ENST00000484954 TSPAN11A1L157 253 aa0.91□□□□□ -2.26
VPS50-216ENST00000484954 RAD1O60671 282 aa0.91□□□□□ -2.26
VPS50-216ENST00000484954 CTNSO60931 367 aa0.91□□□□□ -2.26
VPS50-216ENST00000484954 LSM8O95777 96 aaKnown RBP0.91□□□□□ -2.26
VPS50-216ENST00000484954 MT-ND4P03905 459 aa0.91□□□□□ -2.26
VPS50-216ENST00000484954 IFNW1P05000 195 aa0.91□□□□□ -2.26
VPS50-216ENST00000484954 ANXA8P13928 327 aa0.91□□□□□ -2.26
VPS50-216ENST00000484954 TUBG1P23258 451 aa0.91□□□□□ -2.26
VPS50-216ENST00000484954 HLA-DMAP28067 261 aa0.91□□□□□ -2.26
VPS50-216ENST00000484954 MYCNOSP40205 109 aa0.91□□□□□ -2.26
VPS50-216ENST00000484954 RFC3P40938 356 aa0.91□□□□□ -2.26
VPS50-216ENST00000484954 ACOT2P49753 483 aa0.91□□□□□ -2.26
VPS50-216ENST00000484954 RAB7AP51149 207 aa0.91□□□□□ -2.26
VPS50-216ENST00000484954 TAS2R43P59537 309 aa0.91□□□□□ -2.26
VPS50-216ENST00000484954 ZNF33AQ06730 810 aa0.91□□□□□ -2.26
VPS50-216ENST00000484954 RCN1Q15293 331 aa0.91□□□□□ -2.26
VPS50-216ENST00000484954 CCL15Q16663 113 aa0.91□□□□□ -2.26
VPS50-216ENST00000484954 ANXA8L1Q5VT79 327 aa0.91□□□□□ -2.26
VPS50-216ENST00000484954 KDM4DQ6B0I6 523 aa0.91□□□□□ -2.26
VPS50-216ENST00000484954 AMMECR1LQ6DCA0 310 aa0.91□□□□□ -2.26
VPS50-216ENST00000484954 TWF2Q6IBS0 349 aaKnown RBP0.91□□□□□ -2.26
VPS50-216ENST00000484954 FAM131AQ6UXB0 335 aa0.91□□□□□ -2.26
VPS50-216ENST00000484954 RTL4Q6ZR62 310 aa0.91□□□□□ -2.26
VPS50-216ENST00000484954 CENPQQ7L2Z9 268 aaPredicted RBP0.91□□□□□ -2.26
VPS50-216ENST00000484954 LUZP2Q86TE4 346 aa0.91□□□□□ -2.26
VPS50-216ENST00000484954 KATNAL2Q8IYT4 538 aa0.91□□□□□ -2.26
VPS50-216ENST00000484954 SNX31Q8N9S9 440 aa0.91□□□□□ -2.26
VPS50-216ENST00000484954 BPIFCQ8NFQ6 507 aa0.91□□□□□ -2.26
VPS50-216ENST00000484954 FAM81AQ8TBF8 368 aa0.91□□□□□ -2.26
VPS50-216ENST00000484954 IGF2BP2-AS1Q96M15 143 aa0.91□□□□□ -2.26
VPS50-216ENST00000484954 CCNB1IP1Q9NPC3 277 aa0.91□□□□□ -2.26
VPS50-216ENST00000484954 PRSS16Q9NQE7 514 aa0.91□□□□□ -2.26
VPS50-216ENST00000484954 TUBG2Q9NRH3 451 aa0.91□□□□□ -2.26
VPS50-216ENST00000484954 C20orf96Q9NUD7 363 aaPredicted RBP0.91□□□□□ -2.26
VPS50-216ENST00000484954 MYEF2Q9P2K5 600 aaKnown RBP0.91□□□□□ -2.26
VPS50-216ENST00000484954 LRRC42Q9Y546 428 aa0.91□□□□□ -2.26
VPS50-216ENST00000484954 FHOD3Q2V2M9 1422 aa0.9□□□□□ -2.26
VPS50-216ENST00000484954 DOCK6Q96HP0 2047 aa0.9□□□□□ -2.27
VPS50-216ENST00000484954 LRRIQ4A6NIV6 560 aa0.9□□□□□ -2.27
VPS50-216ENST00000484954 ZNF99A8MXY4 864 aaPredicted RBP0.9□□□□□ -2.27
VPS50-216ENST00000484954 WRBO00258 174 aa0.9□□□□□ -2.27
VPS50-216ENST00000484954 TAAR5O14804 337 aa0.9□□□□□ -2.27
VPS50-216ENST00000484954 AQP9O43315 295 aa0.9□□□□□ -2.27
VPS50-216ENST00000484954 SCO1O75880 301 aa0.9□□□□□ -2.27
VPS50-216ENST00000484954 CCNB2O95067 398 aa0.9□□□□□ -2.27
VPS50-216ENST00000484954 TDP2O95551 362 aa0.9□□□□□ -2.27
VPS50-216ENST00000484954 UBCP0CG48 685 aaKnown RBP0.9□□□□□ -2.27
VPS50-216ENST00000484954 CBR1P16152 277 aa0.9□□□□□ -2.27
VPS50-216ENST00000484954 GSTM3P21266 225 aa0.9□□□□□ -2.27
VPS50-216ENST00000484954 PRKACBP22694 351 aa0.9□□□□□ -2.27
VPS50-216ENST00000484954 CD82P27701 267 aa0.9□□□□□ -2.27
VPS50-216ENST00000484954 GGT2P36268 569 aa0.9□□□□□ -2.27
VPS50-216ENST00000484954 SLC1A2P43004 574 aa0.9□□□□□ -2.27
VPS50-216ENST00000484954 ART3Q13508 389 aa0.9□□□□□ -2.27
VPS50-216ENST00000484954 TPBGQ13641 420 aa0.9□□□□□ -2.27
VPS50-216ENST00000484954 ZNF141Q15928 474 aa0.9□□□□□ -2.27
VPS50-216ENST00000484954 CLEC2AQ6UVW9 174 aa0.9□□□□□ -2.27
VPS50-216ENST00000484954 WDR82Q6UXN9 313 aa0.9□□□□□ -2.27
VPS50-216ENST00000484954 SSX9Q7RTT3 188 aa0.9□□□□□ -2.27
VPS50-216ENST00000484954 DRAM1Q8N682 238 aa0.9□□□□□ -2.27
VPS50-216ENST00000484954 OR1L1Q8NH94 360 aa0.9□□□□□ -2.27
VPS50-216ENST00000484954 S100PBPQ96BU1 408 aa0.9□□□□□ -2.27
VPS50-216ENST00000484954 ZNF707Q96C28 371 aaPredicted RBP0.9□□□□□ -2.27
VPS50-216ENST00000484954 HAUS1Q96CS2 278 aa0.9□□□□□ -2.27
VPS50-216ENST00000484954 DYNLL2Q96FJ2 89 aa0.9□□□□□ -2.27
VPS50-216ENST00000484954 UBE2E2Q96LR5 201 aa0.9□□□□□ -2.27
VPS50-216ENST00000484954 TEAD3Q99594 435 aa0.9□□□□□ -2.27
VPS50-216ENST00000484954 TOLLIPQ9H0E2 274 aa0.9□□□□□ -2.27
VPS50-216ENST00000484954 ABCG5Q9H222 651 aa0.9□□□□□ -2.27
VPS50-216ENST00000484954 DSN1Q9H410 356 aa0.9□□□□□ -2.27
VPS50-216ENST00000484954 VPS37BQ9H9H4 285 aa0.9□□□□□ -2.27
VPS50-216ENST00000484954 RWDD2AQ9UIY3 292 aa0.9□□□□□ -2.27
VPS50-216ENST00000484954 A0A0A6YYD5 115 aa0.89□□□□□ -2.27
VPS50-216ENST00000484954 D6RAR5 112 aa0.89□□□□□ -2.27
VPS50-216ENST00000484954 H7C0C1 242 aa0.89□□□□□ -2.27
VPS50-216ENST00000484954 SLC19A2O60779 497 aa0.89□□□□□ -2.27
VPS50-216ENST00000484954 FGFR1OPO95684 399 aaKnown RBP0.89□□□□□ -2.27
VPS50-216ENST00000484954 TGM6O95932 706 aa0.89□□□□□ -2.27
VPS50-216ENST00000484954 TRBV12-3P01733 135 aa0.89□□□□□ -2.27
VPS50-216ENST00000484954 THRAP10827 490 aa0.89□□□□□ -2.27
VPS50-216ENST00000484954 SFTPCP11686 197 aa0.89□□□□□ -2.27
VPS50-216ENST00000484954 EIF2S2P20042 333 aaKnown RBP0.89□□□□□ -2.27
VPS50-216ENST00000484954 HTR1DP28221 377 aa0.89□□□□□ -2.27
VPS50-216ENST00000484954 HMOX2P30519 316 aa0.89□□□□□ -2.27
VPS50-216ENST00000484954 ATP5OP48047 213 aa0.89□□□□□ -2.27
VPS50-216ENST00000484954 CLDN8P56748 225 aa0.89□□□□□ -2.27
VPS50-216ENST00000484954 CLDN18P56856 261 aa0.89□□□□□ -2.27
VPS50-216ENST00000484954 OR2B8PP59922 312 aa0.89□□□□□ -2.27
VPS50-216ENST00000484954 ATP6V0D1P61421 351 aa0.89□□□□□ -2.27
VPS50-216ENST00000484954 RAD51Q06609 339 aa0.89□□□□□ -2.27
VPS50-216ENST00000484954 OR1Q1Q15612 314 aa0.89□□□□□ -2.27
VPS50-216ENST00000484954 C6orf99Q4VX62 202 aa0.89□□□□□ -2.27
VPS50-216ENST00000484954 TMEM236Q5W0B7 351 aa0.89□□□□□ -2.27
VPS50-216ENST00000484954 ZNF660Q6AZW8 331 aaPredicted RBP0.89□□□□□ -2.27
VPS50-216ENST00000484954 ZNF470Q6ECI4 717 aa0.89□□□□□ -2.27
VPS50-216ENST00000484954 SPNS3Q6ZMD2 512 aa0.89□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms