RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 BRCA1P38398 1863 aaKnown RBP2.31□□□□□ -2.04
SMC4-215ENST00000484799 SMIM26A0A096LP01 95 aa2.31□□□□□ -2.04
SMC4-215ENST00000484799 TRAV8-4A0A0B4J246 113 aa2.31□□□□□ -2.04
SMC4-215ENST00000484799 IGKV1-8A0A0C4DH67 115 aa2.31□□□□□ -2.04
SMC4-215ENST00000484799 ERICH2A1L162 156 aa2.31□□□□□ -2.04
SMC4-215ENST00000484799 KRBOX1C9JBD0 128 aa2.31□□□□□ -2.04
SMC4-215ENST00000484799 ZNF593O00488 134 aaPredicted RBP2.31□□□□□ -2.04
SMC4-215ENST00000484799 PSPHP1O15172 72 aa2.31□□□□□ -2.04
SMC4-215ENST00000484799 SOCS1O15524 211 aa2.31□□□□□ -2.04
SMC4-215ENST00000484799 GCM2O75603 506 aaPredicted RBP2.31□□□□□ -2.04
SMC4-215ENST00000484799 P01737 135 aa2.31□□□□□ -2.04
SMC4-215ENST00000484799 MMP7P09237 267 aaPredicted RBP2.31□□□□□ -2.04
SMC4-215ENST00000484799 ZNF688P0C7X2 276 aa2.31□□□□□ -2.04
SMC4-215ENST00000484799 CD70P32970 193 aa2.31□□□□□ -2.04
SMC4-215ENST00000484799 GGT2P36268 569 aa2.31□□□□□ -2.04
SMC4-215ENST00000484799 RGS6P49758 472 aa2.31□□□□□ -2.04
SMC4-215ENST00000484799 NDUFA8P51970 172 aa2.31□□□□□ -2.04
SMC4-215ENST00000484799 MLF1P58340 268 aa2.31□□□□□ -2.04
SMC4-215ENST00000484799 MTPNP58546 118 aa2.31□□□□□ -2.04
SMC4-215ENST00000484799 CACNG7P62955 275 aa2.31□□□□□ -2.04
SMC4-215ENST00000484799 CDK5Q00535 292 aa2.31□□□□□ -2.04
SMC4-215ENST00000484799 LOXL1Q08397 574 aaPredicted RBP2.31□□□□□ -2.04
SMC4-215ENST00000484799 DMTNQ08495 405 aa2.31□□□□□ -2.04
SMC4-215ENST00000484799 MADCAM1Q13477 382 aa2.31□□□□□ -2.04
SMC4-215ENST00000484799 GPR176Q14439 515 aa2.31□□□□□ -2.04
SMC4-215ENST00000484799 TOMM34Q15785 309 aaPredicted RBP2.31□□□□□ -2.04
SMC4-215ENST00000484799 TAL2Q16559 108 aa2.31□□□□□ -2.04
SMC4-215ENST00000484799 MPV17L2Q567V2 206 aa2.31□□□□□ -2.04
SMC4-215ENST00000484799 FAM27D1Q5T7N8 215 aa2.31□□□□□ -2.04
SMC4-215ENST00000484799 STEAP4Q687X5 459 aa2.31□□□□□ -2.04
SMC4-215ENST00000484799 COPS6Q7L5N1 327 aa2.31□□□□□ -2.04
SMC4-215ENST00000484799 DRAXINQ8NBI3 349 aaPredicted RBP2.31□□□□□ -2.04
SMC4-215ENST00000484799 GPR26Q8NDV2 337 aa2.31□□□□□ -2.04
SMC4-215ENST00000484799 DOK4Q8TEW6 326 aa2.31□□□□□ -2.04
SMC4-215ENST00000484799 MRPL48Q96GC5 212 aaKnown RBP2.31□□□□□ -2.04
SMC4-215ENST00000484799 NARS2Q96I59 477 aaKnown RBP2.31□□□□□ -2.04
SMC4-215ENST00000484799 FAM19A4Q96LR4 140 aa2.31□□□□□ -2.04
SMC4-215ENST00000484799 CIB1Q99828 191 aa2.31□□□□□ -2.04
SMC4-215ENST00000484799 UTP23Q9BRU9 249 aaKnown RBP2.31□□□□□ -2.04
SMC4-215ENST00000484799 COPS4Q9BT78 406 aa2.31□□□□□ -2.04
SMC4-215ENST00000484799 RSG1Q9BU20 258 aa2.31□□□□□ -2.04
SMC4-215ENST00000484799 TMEM243Q9BU79 118 aa2.31□□□□□ -2.04
SMC4-215ENST00000484799 SAMD10Q9BYL1 202 aa2.31□□□□□ -2.04
SMC4-215ENST00000484799 ARV1Q9H2C2 271 aa2.31□□□□□ -2.04
SMC4-215ENST00000484799 C1orf198Q9H425 327 aa2.31□□□□□ -2.04
SMC4-215ENST00000484799 ZNF229Q9UJW7 825 aa2.31□□□□□ -2.04
SMC4-215ENST00000484799 AP3M1Q9Y2T2 418 aa2.31□□□□□ -2.04
SMC4-215ENST00000484799 GMEB1Q9Y692 573 aa2.31□□□□□ -2.04
SMC4-215ENST00000484799 NPHP4O75161 1426 aaPredicted RBP2.31□□□□□ -2.04
SMC4-215ENST00000484799 AK9Q5TCS8 1911 aa2.3□□□□□ -2.04
SMC4-215ENST00000484799 TRAV8-7A0A075B6U6 113 aa2.3□□□□□ -2.04
SMC4-215ENST00000484799 TMEM223A0PJW6 202 aa2.3□□□□□ -2.04
SMC4-215ENST00000484799 ZNF705GA8MUZ8 300 aaPredicted RBP2.3□□□□□ -2.04
SMC4-215ENST00000484799 MANBAO00462 879 aa2.3□□□□□ -2.04
SMC4-215ENST00000484799 EIF1BO60739 113 aaKnown RBP2.3□□□□□ -2.04
SMC4-215ENST00000484799 GLSO94925 669 aaPredicted RBP2.3□□□□□ -2.04
SMC4-215ENST00000484799 VAMP5O95183 116 aa2.3□□□□□ -2.04
SMC4-215ENST00000484799 FADS2O95864 444 aaKnown RBP2.3□□□□□ -2.04
SMC4-215ENST00000484799 CST4P01036 141 aa2.3□□□□□ -2.04
SMC4-215ENST00000484799 APCSP02743 223 aa2.3□□□□□ -2.04
SMC4-215ENST00000484799 RPN2P04844 631 aa2.3□□□□□ -2.04
SMC4-215ENST00000484799 CXCR1P25024 350 aa2.3□□□□□ -2.04
SMC4-215ENST00000484799 EIF1P41567 113 aaKnown RBP2.3□□□□□ -2.04
SMC4-215ENST00000484799 TSPAN5P62079 268 aa2.3□□□□□ -2.04
SMC4-215ENST00000484799 IFFO1Q0D2I5 559 aa2.3□□□□□ -2.04
SMC4-215ENST00000484799 NDUFAF6Q330K2 333 aa2.3□□□□□ -2.04
SMC4-215ENST00000484799 SMUG1Q53HV7 270 aa2.3□□□□□ -2.04
SMC4-215ENST00000484799 FBXW9Q5XUX1 488 aa2.3□□□□□ -2.04
SMC4-215ENST00000484799 APOBEC3HQ6NTF7 200 aaKnown RBP2.3□□□□□ -2.04
SMC4-215ENST00000484799 FAHD1Q6P587 224 aa2.3□□□□□ -2.04
SMC4-215ENST00000484799 DEGS2Q6QHC5 323 aa2.3□□□□□ -2.04
SMC4-215ENST00000484799 IGFL1Q6UW32 110 aa2.3□□□□□ -2.04
SMC4-215ENST00000484799 SSX6Q7RTT6 188 aa2.3□□□□□ -2.04
SMC4-215ENST00000484799 SLC16A13Q7RTY0 426 aa2.3□□□□□ -2.04
SMC4-215ENST00000484799 OR1J4Q8NGS1 313 aa2.3□□□□□ -2.04
SMC4-215ENST00000484799 ENKURQ8TC29 256 aa2.3□□□□□ -2.04
SMC4-215ENST00000484799 ING5Q8WYH8 240 aa2.3□□□□□ -2.04
SMC4-215ENST00000484799 FLYWCH2Q96CP2 140 aaKnown RBP2.3□□□□□ -2.04
SMC4-215ENST00000484799 SNF8Q96H20 258 aa2.3□□□□□ -2.04
SMC4-215ENST00000484799 GABRG3Q99928 467 aa2.3□□□□□ -2.04
SMC4-215ENST00000484799 TIMM29Q9BSF4 260 aa2.3□□□□□ -2.04
SMC4-215ENST00000484799 PRRG3Q9BZD7 231 aa2.3□□□□□ -2.04
SMC4-215ENST00000484799 COA1Q9GZY4 146 aa2.3□□□□□ -2.04
SMC4-215ENST00000484799 OR52D1Q9H346 318 aa2.3□□□□□ -2.04
SMC4-215ENST00000484799 CHMP4BQ9H444 224 aaKnown RBP2.3□□□□□ -2.04
SMC4-215ENST00000484799 PRORYQ9H606 182 aa2.3□□□□□ -2.04
SMC4-215ENST00000484799 ZNF442Q9H7R0 627 aa2.3□□□□□ -2.04
SMC4-215ENST00000484799 C12orf10Q9HB07 376 aa2.3□□□□□ -2.04
SMC4-215ENST00000484799 TREM1Q9NP99 234 aa2.3□□□□□ -2.04
SMC4-215ENST00000484799 EXOSC4Q9NPD3 245 aaKnown RBP2.3□□□□□ -2.04
SMC4-215ENST00000484799 HEBP1Q9NRV9 189 aa2.3□□□□□ -2.04
SMC4-215ENST00000484799 SDHAF2Q9NX18 166 aa2.3□□□□□ -2.04
SMC4-215ENST00000484799 RHBDL2Q9NX52 303 aa2.3□□□□□ -2.04
SMC4-215ENST00000484799 RAB23Q9ULC3 237 aa2.3□□□□□ -2.04
SMC4-215ENST00000484799 NDRG2Q9UN36 371 aaKnown RBP2.3□□□□□ -2.04
SMC4-215ENST00000484799 TFR2Q9UP52 801 aa2.3□□□□□ -2.04
SMC4-215ENST00000484799 MAP3K19Q56UN5 1328 aa2.3□□□□□ -2.04
SMC4-215ENST00000484799 PTPRTO14522 1441 aa2.3□□□□□ -2.04
SMC4-215ENST00000484799 GPATCH8Q9UKJ3 1502 aaKnown RBP2.3□□□□□ -2.04
SMC4-215ENST00000484799 USP42Q9H9J4 1324 aaKnown RBP2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms