RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 GUCA2AQ02747 115 aa9.43□□□□□ -0.9
SCFD1-206ENST00000484733 LRRC10Q5BKY1 277 aa9.43□□□□□ -0.9
SCFD1-206ENST00000484733 SLC35D3Q5M8T2 416 aa9.43□□□□□ -0.9
SCFD1-206ENST00000484733 ZNF788Q6ZQV5 615 aa9.43□□□□□ -0.9
SCFD1-206ENST00000484733 PIP4P2Q8N4L2 257 aa9.43□□□□□ -0.9
SCFD1-206ENST00000484733 LRTOMTQ8WZ04 291 aa9.43□□□□□ -0.9
SCFD1-206ENST00000484733 ASB9Q96DX5 294 aa9.43□□□□□ -0.9
SCFD1-206ENST00000484733 MED30Q96HR3 178 aa9.43□□□□□ -0.9
SCFD1-206ENST00000484733 PAPOLGQ9BWT3 736 aaKnown RBP9.43□□□□□ -0.9
SCFD1-206ENST00000484733 PPP1R3EQ9H7J1 279 aa9.43□□□□□ -0.9
SCFD1-206ENST00000484733 HAO2Q9NYQ3 351 aa9.43□□□□□ -0.9
SCFD1-206ENST00000484733 PDP1Q9P0J1 537 aaPredicted RBP9.43□□□□□ -0.9
SCFD1-206ENST00000484733 MGAM2Q2M2H8 2515 aa9.42□□□□□ -0.9
SCFD1-206ENST00000484733 MEGF8Q7Z7M0 2845 aa9.42□□□□□ -0.9
SCFD1-206ENST00000484733 A0A1B0GW55 424 aa9.42□□□□□ -0.9
SCFD1-206ENST00000484733 PRR23D1E9PI22 279 aaPredicted RBP9.42□□□□□ -0.9
SCFD1-206ENST00000484733 PRODHO43272 600 aa9.42□□□□□ -0.9
SCFD1-206ENST00000484733 IGHV4-59P01825 116 aa9.42□□□□□ -0.9
SCFD1-206ENST00000484733 DUX4L2P0CJ85 424 aa9.42□□□□□ -0.9
SCFD1-206ENST00000484733 DUX4L3P0CJ86 424 aa9.42□□□□□ -0.9
SCFD1-206ENST00000484733 DUX4L4P0CJ87 422 aa9.42□□□□□ -0.9
SCFD1-206ENST00000484733 DUX4L5P0CJ88 424 aa9.42□□□□□ -0.9
SCFD1-206ENST00000484733 DUX4L6P0CJ89 424 aa9.42□□□□□ -0.9
SCFD1-206ENST00000484733 DUX4L7P0CJ90 424 aa9.42□□□□□ -0.9
SCFD1-206ENST00000484733 PRR23D2P0DMB1 279 aaPredicted RBP9.42□□□□□ -0.9
SCFD1-206ENST00000484733 CALB2P22676 271 aa9.42□□□□□ -0.9
SCFD1-206ENST00000484733 CDK5Q00535 292 aa9.42□□□□□ -0.9
SCFD1-206ENST00000484733 PRDX4Q13162 271 aa9.42□□□□□ -0.9
SCFD1-206ENST00000484733 DUX4L9Q6RFH8 374 aaPredicted RBP9.42□□□□□ -0.9
SCFD1-206ENST00000484733 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.42□□□□□ -0.9
SCFD1-206ENST00000484733 FGFRL1Q8N441 504 aa9.42□□□□□ -0.9
SCFD1-206ENST00000484733 IQCF1Q8N6M8 205 aa9.42□□□□□ -0.9
SCFD1-206ENST00000484733 FAM216BQ8N7L0 139 aa9.42□□□□□ -0.9
SCFD1-206ENST00000484733 ZSCAN4Q8NAM6 433 aaPredicted RBP9.42□□□□□ -0.9
SCFD1-206ENST00000484733 LINC01006Q8NI28 216 aa9.42□□□□□ -0.9
SCFD1-206ENST00000484733 LYZL4Q96KX0 146 aa9.42□□□□□ -0.9
SCFD1-206ENST00000484733 DUX4Q9UBX2 424 aa9.42□□□□□ -0.9
SCFD1-206ENST00000484733 RNF114Q9Y508 228 aa9.42□□□□□ -0.9
SCFD1-206ENST00000484733 NKX6-3A6NJ46 265 aa9.42□□□□□ -0.9
SCFD1-206ENST00000484733 H3BN98 237 aa9.42□□□□□ -0.9
SCFD1-206ENST00000484733 CST1P01037 141 aa9.42□□□□□ -0.9
SCFD1-206ENST00000484733 ACKR3P25106 362 aa9.42□□□□□ -0.9
SCFD1-206ENST00000484733 DCTDP32321 178 aa9.42□□□□□ -0.9
SCFD1-206ENST00000484733 GYS2P54840 703 aa9.42□□□□□ -0.9
SCFD1-206ENST00000484733 PROK1P58294 105 aa9.42□□□□□ -0.9
SCFD1-206ENST00000484733 KRTAP10-3P60369 221 aa9.42□□□□□ -0.9
SCFD1-206ENST00000484733 ELF3P78545 371 aaPredicted RBP9.42□□□□□ -0.9
SCFD1-206ENST00000484733 GINS1Q14691 196 aa9.42□□□□□ -0.9
SCFD1-206ENST00000484733 ADGRG5Q8IZF4 528 aa9.42□□□□□ -0.9
SCFD1-206ENST00000484733 Q8N7P7 452 aa9.42□□□□□ -0.9
SCFD1-206ENST00000484733 LRGUKQ96M69 825 aa9.42□□□□□ -0.9
SCFD1-206ENST00000484733 CHID1Q9BWS9 393 aa9.42□□□□□ -0.9
SCFD1-206ENST00000484733 C1orf21Q9H246 121 aa9.42□□□□□ -0.9
SCFD1-206ENST00000484733 OR51V1Q9H2C8 321 aa9.42□□□□□ -0.9
SCFD1-206ENST00000484733 DNAJC27Q9NZQ0 273 aa9.42□□□□□ -0.9
SCFD1-206ENST00000484733 ONECUT1Q9UBC0 465 aa9.42□□□□□ -0.9
SCFD1-206ENST00000484733 AQP12BA6NM10 295 aa9.41□□□□□ -0.9
SCFD1-206ENST00000484733 ZNF850A8MQ14 1090 aa9.41□□□□□ -0.9
SCFD1-206ENST00000484733 M0QZ24 198 aa9.41□□□□□ -0.9
SCFD1-206ENST00000484733 M0R1W7 72 aa9.41□□□□□ -0.9
SCFD1-206ENST00000484733 FBP1P09467 338 aa9.41□□□□□ -0.9
SCFD1-206ENST00000484733 T-ENOLP0DO92 83 aa9.41□□□□□ -0.9
SCFD1-206ENST00000484733 OSMP13725 252 aa9.41□□□□□ -0.9
SCFD1-206ENST00000484733 CAV3P56539 151 aa9.41□□□□□ -0.9
SCFD1-206ENST00000484733 PSMA6P60900 246 aaKnown RBP9.41□□□□□ -0.9
SCFD1-206ENST00000484733 DEFA6Q01524 100 aa9.41□□□□□ -0.9
SCFD1-206ENST00000484733 SRSF4Q08170 494 aaKnown RBP9.41□□□□□ -0.9
SCFD1-206ENST00000484733 BRICD5Q6PL45 260 aa9.41□□□□□ -0.9
SCFD1-206ENST00000484733 AQP12AQ8IXF9 295 aa9.41□□□□□ -0.9
SCFD1-206ENST00000484733 ANGPTL6Q8NI99 470 aa9.41□□□□□ -0.9
SCFD1-206ENST00000484733 THEM6Q8WUY1 208 aa9.41□□□□□ -0.9
SCFD1-206ENST00000484733 SEH1LQ96EE3 360 aa9.41□□□□□ -0.9
SCFD1-206ENST00000484733 GAFA1Q96PS6 74 aa9.41□□□□□ -0.9
SCFD1-206ENST00000484733 FGF23Q9GZV9 251 aaPredicted RBP9.41□□□□□ -0.9
SCFD1-206ENST00000484733 ZNRD1Q9P1U0 126 aa9.41□□□□□ -0.9
SCFD1-206ENST00000484733 FAM96BQ9Y3D0 163 aa9.41□□□□□ -0.9
SCFD1-206ENST00000484733 RNASEK-C17orf49H0YIS7 233 aa9.4□□□□□ -0.9
SCFD1-206ENST00000484733 SIGLEC5O15389 551 aa9.4□□□□□ -0.9
SCFD1-206ENST00000484733 SELENOFO60613 162 aa9.4□□□□□ -0.9
SCFD1-206ENST00000484733 ACAA1P09110 424 aaPredicted RBP9.4□□□□□ -0.9
SCFD1-206ENST00000484733 ATP6V1B1P15313 513 aa9.4□□□□□ -0.9
SCFD1-206ENST00000484733 SLC2A5P22732 501 aa9.4□□□□□ -0.9
SCFD1-206ENST00000484733 GFOD2Q3B7J2 385 aa9.4□□□□□ -0.9
SCFD1-206ENST00000484733 ASPHD2Q6ICH7 369 aa9.4□□□□□ -0.9
SCFD1-206ENST00000484733 PLBD1Q6P4A8 553 aa9.4□□□□□ -0.9
SCFD1-206ENST00000484733 DEGS2Q6QHC5 323 aa9.4□□□□□ -0.9
SCFD1-206ENST00000484733 TMEM179BQ7Z7N9 219 aa9.4□□□□□ -0.9
SCFD1-206ENST00000484733 ZDHHC23Q8IYP9 409 aa9.4□□□□□ -0.9
SCFD1-206ENST00000484733 PAPD5Q8NDF8 572 aaKnown RBP9.4□□□□□ -0.9
SCFD1-206ENST00000484733 RPL3LQ92901 407 aaKnown RBP9.4□□□□□ -0.9
SCFD1-206ENST00000484733 TNFRSF14Q92956 283 aa9.4□□□□□ -0.9
SCFD1-206ENST00000484733 OTULINQ96BN8 352 aa9.4□□□□□ -0.9
SCFD1-206ENST00000484733 RNF170Q96K19 258 aa9.4□□□□□ -0.9
SCFD1-206ENST00000484733 CCT8L2Q96SF2 557 aa9.4□□□□□ -0.9
SCFD1-206ENST00000484733 PKP2Q99959 881 aa9.4□□□□□ -0.9
SCFD1-206ENST00000484733 MMP27Q9H306 513 aa9.4□□□□□ -0.9
SCFD1-206ENST00000484733 BRD7Q9NPI1 651 aa9.4□□□□□ -0.9
SCFD1-206ENST00000484733 DNAJB11Q9UBS4 358 aa9.4□□□□□ -0.9
SCFD1-206ENST00000484733 A0A0U1RQV5 110 aa9.4□□□□□ -0.9
SCFD1-206ENST00000484733 NPFFO15130 113 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms