RNA–Protein interactions for RNA: ENST00000484528.1

USP40-215, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 2

Gene USP40, Length 933 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-215ENST00000484528 RTL8AQ9BWD3 113 aa17.78■□□□□ 0.44
USP40-215ENST00000484528 FGF23Q9GZV9 251 aaPredicted RBP17.78■□□□□ 0.44
USP40-215ENST00000484528 SLITRK2Q9H156 845 aa17.78■□□□□ 0.44
USP40-215ENST00000484528 TLNRD1Q9H1K6 362 aa17.78■□□□□ 0.44
USP40-215ENST00000484528 WDR13Q9H1Z4 485 aa17.78■□□□□ 0.44
USP40-215ENST00000484528 C1RLQ9NZP8 487 aa17.78■□□□□ 0.44
USP40-215ENST00000484528 KNG1P01042 644 aa17.77■□□□□ 0.44
USP40-215ENST00000484528 IGHV4-59P01825 116 aa17.77■□□□□ 0.44
USP40-215ENST00000484528 AMY2BP19961 511 aa17.77■□□□□ 0.44
USP40-215ENST00000484528 IL5RAQ01344 420 aa17.77■□□□□ 0.44
USP40-215ENST00000484528 CDONQ4KMG0 1287 aa17.77■□□□□ 0.44
USP40-215ENST00000484528 TMEM236Q5W0B7 351 aa17.77■□□□□ 0.44
USP40-215ENST00000484528 TREML4Q6UXN2 200 aa17.77■□□□□ 0.44
USP40-215ENST00000484528 KCTD8Q6ZWB6 473 aa17.77■□□□□ 0.44
USP40-215ENST00000484528 RHOUQ7L0Q8 258 aa17.77■□□□□ 0.44
USP40-215ENST00000484528 SLC36A1Q7Z2H8 476 aa17.77■□□□□ 0.44
USP40-215ENST00000484528 FTMTQ8N4E7 242 aa17.77■□□□□ 0.44
USP40-215ENST00000484528 ZNF454Q8N9F8 522 aa17.77■□□□□ 0.44
USP40-215ENST00000484528 OR8B12Q8NGG6 310 aa17.77■□□□□ 0.44
USP40-215ENST00000484528 OR4F5Q8NH21 305 aa17.77■□□□□ 0.44
USP40-215ENST00000484528 WFDC12Q8WWY7 111 aa17.77■□□□□ 0.44
USP40-215ENST00000484528 PIGCQ92535 297 aa17.77■□□□□ 0.44
USP40-215ENST00000484528 PKP2Q99959 881 aa17.77■□□□□ 0.44
USP40-215ENST00000484528 SEMA6AQ9H2E6 1030 aa17.77■□□□□ 0.44
USP40-215ENST00000484528 RGCCQ9H4X1 137 aa17.77■□□□□ 0.44
USP40-215ENST00000484528 CNTD2Q9H8S5 307 aa17.77■□□□□ 0.44
USP40-215ENST00000484528 SIRT7Q9NRC8 400 aa17.77■□□□□ 0.44
USP40-215ENST00000484528 DNAJB11Q9UBS4 358 aa17.77■□□□□ 0.44
USP40-215ENST00000484528 MMP24Q9Y5R2 645 aa17.77■□□□□ 0.44
USP40-215ENST00000484528 AQP12BA6NM10 295 aa17.76■□□□□ 0.43
USP40-215ENST00000484528 PRODHO43272 600 aa17.76■□□□□ 0.43
USP40-215ENST00000484528 NDUFB3O43676 98 aa17.76■□□□□ 0.43
USP40-215ENST00000484528 OSMP13725 252 aa17.76■□□□□ 0.43
USP40-215ENST00000484528 HCCSP53701 268 aa17.76■□□□□ 0.43
USP40-215ENST00000484528 DLX1P56177 255 aa17.76■□□□□ 0.43
USP40-215ENST00000484528 PSMA6P60900 246 aaKnown RBP17.76■□□□□ 0.43
USP40-215ENST00000484528 STUMQ69YW2 141 aa17.76■□□□□ 0.43
USP40-215ENST00000484528 AQP12AQ8IXF9 295 aa17.76■□□□□ 0.43
USP40-215ENST00000484528 TMEM86BQ8N661 226 aa17.76■□□□□ 0.43
USP40-215ENST00000484528 SSMEM1Q8WWF3 244 aa17.76■□□□□ 0.43
USP40-215ENST00000484528 HPSE2Q8WWQ2 592 aa17.76■□□□□ 0.43
USP40-215ENST00000484528 OR5P3Q8WZ94 311 aa17.76■□□□□ 0.43
USP40-215ENST00000484528 ZNF556Q9HAH1 456 aa17.76■□□□□ 0.43
USP40-215ENST00000484528 BEX1Q9HBH7 125 aa17.76■□□□□ 0.43
USP40-215ENST00000484528 LRP12Q9Y561 859 aa17.76■□□□□ 0.43
USP40-215ENST00000484528 MPC1Q9Y5U8 109 aa17.76■□□□□ 0.43
USP40-215ENST00000484528 KPTNQ9Y664 436 aa17.76■□□□□ 0.43
USP40-215ENST00000484528 POMT1Q9Y6A1 747 aa17.76■□□□□ 0.43
USP40-215ENST00000484528 PSMD9O00233 223 aa17.75■□□□□ 0.43
USP40-215ENST00000484528 AKR7A2O43488 359 aa17.75■□□□□ 0.43
USP40-215ENST00000484528 HMGN1P05114 100 aa17.75■□□□□ 0.43
USP40-215ENST00000484528 SNCBQ16143 134 aa17.75■□□□□ 0.43
USP40-215ENST00000484528 KRT77Q7Z794 578 aa17.75■□□□□ 0.43
USP40-215ENST00000484528 SPATA24Q86W54 205 aa17.75■□□□□ 0.43
USP40-215ENST00000484528 PIP4P2Q8N4L2 257 aa17.75■□□□□ 0.43
USP40-215ENST00000484528 H1FXQ92522 213 aaKnown RBP17.75■□□□□ 0.43
USP40-215ENST00000484528 RNF170Q96K19 258 aa17.75■□□□□ 0.43
USP40-215ENST00000484528 C1orf21Q9H246 121 aa17.75■□□□□ 0.43
USP40-215ENST00000484528 HAO2Q9NYQ3 351 aa17.75■□□□□ 0.43
USP40-215ENST00000484528 ZNF391Q9UJN7 358 aa17.75■□□□□ 0.43
USP40-215ENST00000484528 NOTCH1P46531 2555 aa17.75■□□□□ 0.43
USP40-215ENST00000484528 A0A1B0GVI7 797 aa17.74■□□□□ 0.43
USP40-215ENST00000484528 A0A1W2PRD5 423 aa17.74■□□□□ 0.43
USP40-215ENST00000484528 A0A1W2PRF3 423 aa17.74■□□□□ 0.43
USP40-215ENST00000484528 A0A1W2PRM7 423 aa17.74■□□□□ 0.43
USP40-215ENST00000484528 GPR137BO60478 399 aa17.74■□□□□ 0.43
USP40-215ENST00000484528 MRPL3P09001 348 aaKnown RBP17.74■□□□□ 0.43
USP40-215ENST00000484528 SLC2A5P22732 501 aa17.74■□□□□ 0.43
USP40-215ENST00000484528 CDK5Q00535 292 aa17.74■□□□□ 0.43
USP40-215ENST00000484528 APOFQ13790 326 aa17.74■□□□□ 0.43
USP40-215ENST00000484528 C11orf91Q3C1V1 193 aa17.74■□□□□ 0.43
USP40-215ENST00000484528 DMRTC1Q5HYR2 192 aa17.74■□□□□ 0.43
USP40-215ENST00000484528 C17orf107Q6ZR85 190 aa17.74■□□□□ 0.43
USP40-215ENST00000484528 ZDHHC23Q8IYP9 409 aa17.74■□□□□ 0.43
USP40-215ENST00000484528 LY6G5BQ8NDX9 201 aa17.74■□□□□ 0.43
USP40-215ENST00000484528 TBC1D15Q8TC07 691 aa17.74■□□□□ 0.43
USP40-215ENST00000484528 C12orf43Q96C57 262 aaKnown RBP17.74■□□□□ 0.43
USP40-215ENST00000484528 TTTY10Q9BZA0 68 aa17.74■□□□□ 0.43
USP40-215ENST00000484528 LAMP5Q9UJQ1 280 aa17.74■□□□□ 0.43
USP40-215ENST00000484528 A0A1B0GUS0 222 aa17.73■□□□□ 0.43
USP40-215ENST00000484528 NKX6-3A6NJ46 265 aa17.73■□□□□ 0.43
USP40-215ENST00000484528 TMEM210A6NLX4 147 aa17.73■□□□□ 0.43
USP40-215ENST00000484528 NDUFA7O95182 113 aa17.73■□□□□ 0.43
USP40-215ENST00000484528 CST4P01036 141 aa17.73■□□□□ 0.43
USP40-215ENST00000484528 TGM4P49221 684 aa17.73■□□□□ 0.43
USP40-215ENST00000484528 CBX1P83916 185 aa17.73■□□□□ 0.43
USP40-215ENST00000484528 KLRD1Q13241 179 aa17.73■□□□□ 0.43
USP40-215ENST00000484528 FLOT2Q14254 428 aa17.73■□□□□ 0.43
USP40-215ENST00000484528 LRRC10Q5BKY1 277 aa17.73■□□□□ 0.43
USP40-215ENST00000484528 OLFML2AQ68BL7 652 aa17.73■□□□□ 0.43
USP40-215ENST00000484528 OR10Z1Q8NGY1 313 aa17.73■□□□□ 0.43
USP40-215ENST00000484528 FAM81AQ8TBF8 368 aa17.73■□□□□ 0.43
USP40-215ENST00000484528 RAB3IPQ96QF0 476 aaPredicted RBP17.73■□□□□ 0.43
USP40-215ENST00000484528 DCTN5Q9BTE1 182 aa17.73■□□□□ 0.43
USP40-215ENST00000484528 VWFP04275 2813 aa17.72■□□□□ 0.43
USP40-215ENST00000484528 FKBP6O75344 327 aa17.72■□□□□ 0.43
USP40-215ENST00000484528 ALOX5APP20292 161 aa17.72■□□□□ 0.43
USP40-215ENST00000484528 GPM6AP51674 278 aa17.72■□□□□ 0.43
USP40-215ENST00000484528 CEP78Q5JTW2 689 aa17.72■□□□□ 0.43
USP40-215ENST00000484528 SLC35D3Q5M8T2 416 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms