RNA–Protein interactions for RNA: ENST00000483941.1

SMAD9-204, Transcript of SMAD family member 9, humanhuman

TSL 3

Gene SMAD9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-204ENST00000483941 CFPP27918 469 aa12.02□□□□□ -0.49
SMAD9-204ENST00000483941 MAGEB1P43366 347 aa12.02□□□□□ -0.49
SMAD9-204ENST00000483941 MZT1Q08AG7 82 aa12.02□□□□□ -0.49
SMAD9-204ENST00000483941 CEP78Q5JTW2 689 aa12.02□□□□□ -0.49
SMAD9-204ENST00000483941 MBNL2Q5VZF2 373 aaKnown RBP12.02□□□□□ -0.49
SMAD9-204ENST00000483941 RGS7BPQ6MZT1 257 aaPredicted RBP12.02□□□□□ -0.49
SMAD9-204ENST00000483941 ZNF529Q6P280 563 aa12.02□□□□□ -0.49
SMAD9-204ENST00000483941 RFPL4BQ6ZWI9 263 aa12.02□□□□□ -0.49
SMAD9-204ENST00000483941 LRRTM1Q86UE6 522 aa12.02□□□□□ -0.49
SMAD9-204ENST00000483941 NUP37Q8NFH4 326 aa12.02□□□□□ -0.49
SMAD9-204ENST00000483941 HAVCR1Q96D42 359 aa12.02□□□□□ -0.49
SMAD9-204ENST00000483941 ADAT3Q96EY9 351 aaPredicted RBP12.02□□□□□ -0.49
SMAD9-204ENST00000483941 WFIKKN1Q96NZ8 548 aa12.02□□□□□ -0.49
SMAD9-204ENST00000483941 SORCS2Q96PQ0 1159 aa12.02□□□□□ -0.49
SMAD9-204ENST00000483941 NXF2Q9GZY0 626 aaKnown RBP12.02□□□□□ -0.49
SMAD9-204ENST00000483941 MRPL15Q9P015 296 aaKnown RBP12.02□□□□□ -0.49
SMAD9-204ENST00000483941 AK6Q9Y3D8 172 aaKnown RBP12.02□□□□□ -0.49
SMAD9-204ENST00000483941 MPC1Q9Y5U8 109 aa12.02□□□□□ -0.49
SMAD9-204ENST00000483941 IFITM5A6NNB3 132 aa12.01□□□□□ -0.49
SMAD9-204ENST00000483941 HCKP08631 526 aa12.01□□□□□ -0.49
SMAD9-204ENST00000483941 FAHP16930 419 aa12.01□□□□□ -0.49
SMAD9-204ENST00000483941 ATF1P18846 271 aa12.01□□□□□ -0.49
SMAD9-204ENST00000483941 RIN1Q13671 783 aa12.01□□□□□ -0.49
SMAD9-204ENST00000483941 CDSNQ15517 529 aa12.01□□□□□ -0.49
SMAD9-204ENST00000483941 FAM189A2Q15884 450 aa12.01□□□□□ -0.49
SMAD9-204ENST00000483941 BEX5Q5H9J7 111 aa12.01□□□□□ -0.49
SMAD9-204ENST00000483941 IDNKQ5T6J7 187 aa12.01□□□□□ -0.49
SMAD9-204ENST00000483941 DDI2Q5TDH0 399 aa12.01□□□□□ -0.49
SMAD9-204ENST00000483941 TMEM42Q69YG0 159 aa12.01□□□□□ -0.49
SMAD9-204ENST00000483941 DNAAF1Q8NEP3 725 aa12.01□□□□□ -0.49
SMAD9-204ENST00000483941 OR6M1Q8NGM8 313 aa12.01□□□□□ -0.49
SMAD9-204ENST00000483941 ZNF671Q8TAW3 534 aa12.01□□□□□ -0.49
SMAD9-204ENST00000483941 SLC25A40Q8TBP6 338 aa12.01□□□□□ -0.49
SMAD9-204ENST00000483941 CMBLQ96DG6 245 aa12.01□□□□□ -0.49
SMAD9-204ENST00000483941 ZC3HAV1LQ96H79 300 aaKnown RBP12.01□□□□□ -0.49
SMAD9-204ENST00000483941 CEP19Q96LK0 163 aa12.01□□□□□ -0.49
SMAD9-204ENST00000483941 CMTM3Q96MX0 182 aa12.01□□□□□ -0.49
SMAD9-204ENST00000483941 SPOCK3Q9BQ16 436 aa12.01□□□□□ -0.49
SMAD9-204ENST00000483941 OR2J1Q9GZK6 312 aa12.01□□□□□ -0.49
SMAD9-204ENST00000483941 C6orf62Q9GZU0 229 aaPredicted RBP12.01□□□□□ -0.49
SMAD9-204ENST00000483941 PLGRKTQ9HBL7 147 aa12.01□□□□□ -0.49
SMAD9-204ENST00000483941 NPAP1Q9NZP6 1156 aa12.01□□□□□ -0.49
SMAD9-204ENST00000483941 GPR160Q9UJ42 338 aa12.01□□□□□ -0.49
SMAD9-204ENST00000483941 TRAV8-7A0A075B6U6 113 aa12□□□□□ -0.49
SMAD9-204ENST00000483941 C5orf63A6NC05 138 aa12□□□□□ -0.49
SMAD9-204ENST00000483941 GMDSO60547 372 aa12□□□□□ -0.49
SMAD9-204ENST00000483941 THBDP07204 575 aa12□□□□□ -0.49
SMAD9-204ENST00000483941 CD3EP07766 207 aa12□□□□□ -0.49
SMAD9-204ENST00000483941 CLEC2LP0C7M8 214 aa12□□□□□ -0.49
SMAD9-204ENST00000483941 CALCBP10092 127 aa12□□□□□ -0.49
SMAD9-204ENST00000483941 CD37P11049 281 aa12□□□□□ -0.49
SMAD9-204ENST00000483941 CALCRP30988 508 aa12□□□□□ -0.49
SMAD9-204ENST00000483941 ZNF93P35789 620 aaPredicted RBP12□□□□□ -0.49
SMAD9-204ENST00000483941 FUT6P51993 359 aa12□□□□□ -0.49
SMAD9-204ENST00000483941 ART1P52961 327 aa12□□□□□ -0.49
SMAD9-204ENST00000483941 SPOCK1Q08629 439 aa12□□□□□ -0.49
SMAD9-204ENST00000483941 SNTB2Q13425 540 aaKnown RBP12□□□□□ -0.49
SMAD9-204ENST00000483941 HLXQ14774 488 aaPredicted RBP12□□□□□ -0.49
SMAD9-204ENST00000483941 RAB11BQ15907 218 aa12□□□□□ -0.49
SMAD9-204ENST00000483941 LHFPL2Q6ZUX7 228 aa12□□□□□ -0.49
SMAD9-204ENST00000483941 MYPOPQ86VE0 399 aaPredicted RBP12□□□□□ -0.49
SMAD9-204ENST00000483941 SPERTQ8NA61 448 aa12□□□□□ -0.49
SMAD9-204ENST00000483941 OR56B2PQ8NGI1 322 aa12□□□□□ -0.49
SMAD9-204ENST00000483941 OR13C9Q8NGT0 318 aa12□□□□□ -0.49
SMAD9-204ENST00000483941 SYNPRQ8TBG9 265 aa12□□□□□ -0.49
SMAD9-204ENST00000483941 KLF14Q8TD94 323 aaPredicted RBP12□□□□□ -0.49
SMAD9-204ENST00000483941 S100ZQ8WXG8 99 aa12□□□□□ -0.49
SMAD9-204ENST00000483941 PIGCQ92535 297 aa12□□□□□ -0.49
SMAD9-204ENST00000483941 MARS2Q96GW9 593 aaKnown RBP12□□□□□ -0.49
SMAD9-204ENST00000483941 OR51B6Q9H340 312 aa12□□□□□ -0.49
SMAD9-204ENST00000483941 METTL17Q9H7H0 456 aaPredicted RBP12□□□□□ -0.49
SMAD9-204ENST00000483941 PCDHB16Q9NRJ7 776 aa12□□□□□ -0.49
SMAD9-204ENST00000483941 GHRLQ9UBU3 117 aa12□□□□□ -0.49
SMAD9-204ENST00000483941 CGGBP1Q9UFW8 167 aaPredicted RBP12□□□□□ -0.49
SMAD9-204ENST00000483941 STEAP1Q9UHE8 339 aa12□□□□□ -0.49
SMAD9-204ENST00000483941 DAPK2Q9UIK4 370 aa12□□□□□ -0.49
SMAD9-204ENST00000483941 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.99□□□□□ -0.49
SMAD9-204ENST00000483941 SHISA3A0PJX4 238 aa11.99□□□□□ -0.49
SMAD9-204ENST00000483941 IQCF6A8MYZ5 107 aa11.99□□□□□ -0.49
SMAD9-204ENST00000483941 SLC17A2O00624 439 aa11.99□□□□□ -0.49
SMAD9-204ENST00000483941 GOSR1O95249 250 aa11.99□□□□□ -0.49
SMAD9-204ENST00000483941 UBBP0CG47 229 aa11.99□□□□□ -0.49
SMAD9-204ENST00000483941 ZNF250P15622 560 aa11.99□□□□□ -0.49
SMAD9-204ENST00000483941 KITLGP21583 273 aa11.99□□□□□ -0.49
SMAD9-204ENST00000483941 ACKR3P25106 362 aa11.99□□□□□ -0.49
SMAD9-204ENST00000483941 RBP2P50120 134 aa11.99□□□□□ -0.49
SMAD9-204ENST00000483941 ATP1B3P54709 279 aa11.99□□□□□ -0.49
SMAD9-204ENST00000483941 TFF3Q07654 80 aa11.99□□□□□ -0.49
SMAD9-204ENST00000483941 NCMAPQ5T1S8 102 aa11.99□□□□□ -0.49
SMAD9-204ENST00000483941 SLC22A25Q6T423 547 aa11.99□□□□□ -0.49
SMAD9-204ENST00000483941 MEX3BQ6ZN04 569 aaKnown RBP11.99□□□□□ -0.49
SMAD9-204ENST00000483941 ZDHHC23Q8IYP9 409 aa11.99□□□□□ -0.49
SMAD9-204ENST00000483941 PIAS4Q8N2W9 510 aaPredicted RBP11.99□□□□□ -0.49
SMAD9-204ENST00000483941 JAGN1Q8N5M9 183 aa11.99□□□□□ -0.49
SMAD9-204ENST00000483941 BORCS8Q96FH0 119 aa11.99□□□□□ -0.49
SMAD9-204ENST00000483941 GPER1Q99527 375 aa11.99□□□□□ -0.49
SMAD9-204ENST00000483941 S100A13Q99584 98 aa11.99□□□□□ -0.49
SMAD9-204ENST00000483941 MICU1Q9BPX6 476 aa11.99□□□□□ -0.49
SMAD9-204ENST00000483941 SOX7Q9BT81 388 aa11.99□□□□□ -0.49
SMAD9-204ENST00000483941 PAPOLGQ9BWT3 736 aaKnown RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms