RNA–Protein interactions for RNA: ENST00000483546.1

RPP40-206, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 3

Gene RPP40, Length 654 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-206ENST00000483546 KLHL36Q8N4N3 616 aa13.14□□□□□ -0.31
RPP40-206ENST00000483546 LINC01356Q8N9X3 169 aa13.14□□□□□ -0.31
RPP40-206ENST00000483546 OR14K1Q8NGZ2 314 aa13.14□□□□□ -0.31
RPP40-206ENST00000483546 ZNF420Q8TAQ5 688 aaPredicted RBP13.14□□□□□ -0.31
RPP40-206ENST00000483546 OR5P3Q8WZ94 311 aa13.14□□□□□ -0.31
RPP40-206ENST00000483546 PIGCQ92535 297 aa13.14□□□□□ -0.31
RPP40-206ENST00000483546 PPP1R14AQ96A00 147 aa13.14□□□□□ -0.31
RPP40-206ENST00000483546 PELI1Q96FA3 418 aa13.14□□□□□ -0.31
RPP40-206ENST00000483546 TMEM80Q96HE8 168 aa13.14□□□□□ -0.31
RPP40-206ENST00000483546 GAL3ST1Q99999 423 aa13.14□□□□□ -0.31
RPP40-206ENST00000483546 SOX7Q9BT81 388 aa13.14□□□□□ -0.31
RPP40-206ENST00000483546 TLNRD1Q9H1K6 362 aa13.14□□□□□ -0.31
RPP40-206ENST00000483546 TRIM36Q9NQ86 728 aa13.14□□□□□ -0.31
RPP40-206ENST00000483546 CHCHD3Q9NX63 227 aaKnown RBP13.14□□□□□ -0.31
RPP40-206ENST00000483546 RNF7Q9UBF6 113 aa13.14□□□□□ -0.31
RPP40-206ENST00000483546 PIGLQ9Y2B2 252 aa13.14□□□□□ -0.31
RPP40-206ENST00000483546 CAB39Q9Y376 341 aaPredicted RBP13.14□□□□□ -0.31
RPP40-206ENST00000483546 MALRD1Q5VYJ5 2156 aa13.13□□□□□ -0.31
RPP40-206ENST00000483546 PPIAL4EA0A075B759 164 aa13.13□□□□□ -0.31
RPP40-206ENST00000483546 ISPDA4D126 451 aa13.13□□□□□ -0.31
RPP40-206ENST00000483546 A6NLC8 198 aa13.13□□□□□ -0.31
RPP40-206ENST00000483546 B4DSR2 109 aa13.13□□□□□ -0.31
RPP40-206ENST00000483546 PPIAL4DF5H284 164 aa13.13□□□□□ -0.31
RPP40-206ENST00000483546 CCDC159P0C7I6 412 aa13.13□□□□□ -0.31
RPP40-206ENST00000483546 LIMS3P0CW19 117 aa13.13□□□□□ -0.31
RPP40-206ENST00000483546 LIMS4P0CW20 117 aa13.13□□□□□ -0.31
RPP40-206ENST00000483546 PPIAL4FP0DN26 164 aa13.13□□□□□ -0.31
RPP40-206ENST00000483546 PCMT1P22061 227 aa13.13□□□□□ -0.31
RPP40-206ENST00000483546 CFHR2P36980 270 aa13.13□□□□□ -0.31
RPP40-206ENST00000483546 PSMB10P40306 273 aa13.13□□□□□ -0.31
RPP40-206ENST00000483546 TGM4P49221 684 aa13.13□□□□□ -0.31
RPP40-206ENST00000483546 GBX2P52951 348 aaPredicted RBP13.13□□□□□ -0.31
RPP40-206ENST00000483546 LMO4P61968 165 aa13.13□□□□□ -0.31
RPP40-206ENST00000483546 MPPED2Q15777 294 aa13.13□□□□□ -0.31
RPP40-206ENST00000483546 KCNJ8Q15842 424 aa13.13□□□□□ -0.31
RPP40-206ENST00000483546 CEACAM21Q3KPI0 293 aa13.13□□□□□ -0.31
RPP40-206ENST00000483546 FAM76BQ5HYJ3 339 aa13.13□□□□□ -0.31
RPP40-206ENST00000483546 CLVS2Q5SYC1 327 aa13.13□□□□□ -0.31
RPP40-206ENST00000483546 PRAMEF6Q5VXH4 476 aa13.13□□□□□ -0.31
RPP40-206ENST00000483546 TMEM42Q69YG0 159 aa13.13□□□□□ -0.31
RPP40-206ENST00000483546 FAM166AQ6J272 317 aa13.13□□□□□ -0.31
RPP40-206ENST00000483546 OR1M1Q8NGA1 313 aa13.13□□□□□ -0.31
RPP40-206ENST00000483546 OR5A2Q8NGI9 324 aa13.13□□□□□ -0.31
RPP40-206ENST00000483546 DVL3Q92997 716 aaPredicted RBP13.13□□□□□ -0.31
RPP40-206ENST00000483546 RNF166Q96A37 237 aaPredicted RBP13.13□□□□□ -0.31
RPP40-206ENST00000483546 MSI2Q96DH6 328 aaKnown RBP13.13□□□□□ -0.31
RPP40-206ENST00000483546 TECTBQ96PL2 329 aa13.13□□□□□ -0.31
RPP40-206ENST00000483546 NARFLQ9H6Q4 476 aa13.13□□□□□ -0.31
RPP40-206ENST00000483546 ZNF665Q9H7R5 613 aa13.13□□□□□ -0.31
RPP40-206ENST00000483546 PLEKHA1Q9HB21 404 aa13.13□□□□□ -0.31
RPP40-206ENST00000483546 UFSP2Q9NUQ7 469 aa13.13□□□□□ -0.31
RPP40-206ENST00000483546 TMEM160Q9NX00 188 aa13.13□□□□□ -0.31
RPP40-206ENST00000483546 PPIAL4AQ9Y536 164 aa13.13□□□□□ -0.31
RPP40-206ENST00000483546 ABCA2Q9BZC7 2435 aa13.13□□□□□ -0.31
RPP40-206ENST00000483546 NSD1Q96L73 2696 aaPredicted RBP13.12□□□□□ -0.31
RPP40-206ENST00000483546 A8MV72 311 aaPredicted RBP13.12□□□□□ -0.31
RPP40-206ENST00000483546 WNT9BO14905 357 aa13.12□□□□□ -0.31
RPP40-206ENST00000483546 CYB5R3P00387 301 aaPredicted RBP13.12□□□□□ -0.31
RPP40-206ENST00000483546 NRASP01111 189 aa13.12□□□□□ -0.31
RPP40-206ENST00000483546 IGHV2-5P01817 119 aa13.12□□□□□ -0.31
RPP40-206ENST00000483546 GRPP07492 148 aa13.12□□□□□ -0.31
RPP40-206ENST00000483546 FAHP16930 419 aa13.12□□□□□ -0.31
RPP40-206ENST00000483546 IL2RGP31785 369 aa13.12□□□□□ -0.31
RPP40-206ENST00000483546 PMELP40967 661 aa13.12□□□□□ -0.31
RPP40-206ENST00000483546 KIR3DL2P43630 455 aa13.12□□□□□ -0.31
RPP40-206ENST00000483546 GNG3P63215 75 aa13.12□□□□□ -0.31
RPP40-206ENST00000483546 ZNF154Q13106 437 aa13.12□□□□□ -0.31
RPP40-206ENST00000483546 ALKBH1Q13686 389 aaKnown RBP13.12□□□□□ -0.31
RPP40-206ENST00000483546 ZMYND11Q15326 602 aa13.12□□□□□ -0.31
RPP40-206ENST00000483546 CCDC58Q4VC31 144 aa13.12□□□□□ -0.31
RPP40-206ENST00000483546 IZUMO2Q6UXV1 221 aa13.12□□□□□ -0.31
RPP40-206ENST00000483546 HPSE2Q8WWQ2 592 aa13.12□□□□□ -0.31
RPP40-206ENST00000483546 GGHQ92820 318 aa13.12□□□□□ -0.31
RPP40-206ENST00000483546 RNF170Q96K19 258 aa13.12□□□□□ -0.31
RPP40-206ENST00000483546 ANKRD60Q9BZ19 345 aa13.12□□□□□ -0.31
RPP40-206ENST00000483546 DCAF16Q9NXF7 216 aa13.12□□□□□ -0.31
RPP40-206ENST00000483546 FRRS1LQ9P0K9 344 aa13.12□□□□□ -0.31
RPP40-206ENST00000483546 PSORS1C1Q9UIG5 152 aa13.12□□□□□ -0.31
RPP40-206ENST00000483546 PCDHB10Q9UN67 800 aa13.12□□□□□ -0.31
RPP40-206ENST00000483546 IGHV3-64DA0A0J9YX35 117 aa13.11□□□□□ -0.31
RPP40-206ENST00000483546 LOC107986453A0A1B0GWG9 222 aa13.11□□□□□ -0.31
RPP40-206ENST00000483546 TMEM212A6NML5 194 aa13.11□□□□□ -0.31
RPP40-206ENST00000483546 GATBO75879 557 aaKnown RBP13.11□□□□□ -0.31
RPP40-206ENST00000483546 ZNF16P17020 682 aaPredicted RBP13.11□□□□□ -0.31
RPP40-206ENST00000483546 MYF6P23409 242 aa13.11□□□□□ -0.31
RPP40-206ENST00000483546 VHLP40337 213 aa13.11□□□□□ -0.31
RPP40-206ENST00000483546 DVL1P1P54792 670 aaPredicted RBP13.11□□□□□ -0.31
RPP40-206ENST00000483546 NANOS3P60323 173 aaKnown RBP13.11□□□□□ -0.31
RPP40-206ENST00000483546 ST3GAL4Q11206 333 aa13.11□□□□□ -0.31
RPP40-206ENST00000483546 ZNF404Q494X3 552 aa13.11□□□□□ -0.31
RPP40-206ENST00000483546 PLCXD3Q63HM9 321 aa13.11□□□□□ -0.31
RPP40-206ENST00000483546 WDR86Q86TI4 376 aa13.11□□□□□ -0.31
RPP40-206ENST00000483546 OR10Z1Q8NGY1 313 aa13.11□□□□□ -0.31
RPP40-206ENST00000483546 OR52N1Q8NH53 320 aa13.11□□□□□ -0.31
RPP40-206ENST00000483546 OR51F2Q8NH61 342 aa13.11□□□□□ -0.31
RPP40-206ENST00000483546 PP6455Q8WZ26 134 aa13.11□□□□□ -0.31
RPP40-206ENST00000483546 COMMD4Q9H0A8 199 aa13.11□□□□□ -0.31
RPP40-206ENST00000483546 ISG20L2Q9H9L3 353 aaKnown RBP13.11□□□□□ -0.31
RPP40-206ENST00000483546 PATZ1Q9HBE1 687 aaKnown RBP13.11□□□□□ -0.31
RPP40-206ENST00000483546 YAE1D1Q9NRH1 226 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms