RNA–Protein interactions for RNA: ENST00000482507.5

ATG4B-220, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-220ENST00000482507 GSTP1P09211 210 aaKnown RBP13.08□□□□□ -0.32
ATG4B-220ENST00000482507 QDPRP09417 244 aa13.08□□□□□ -0.32
ATG4B-220ENST00000482507 DUX4L2P0CJ85 424 aa13.08□□□□□ -0.32
ATG4B-220ENST00000482507 DUX4L3P0CJ86 424 aa13.08□□□□□ -0.32
ATG4B-220ENST00000482507 DUX4L4P0CJ87 422 aa13.08□□□□□ -0.32
ATG4B-220ENST00000482507 DUX4L5P0CJ88 424 aa13.08□□□□□ -0.32
ATG4B-220ENST00000482507 DUX4L6P0CJ89 424 aa13.08□□□□□ -0.32
ATG4B-220ENST00000482507 DUX4L7P0CJ90 424 aa13.08□□□□□ -0.32
ATG4B-220ENST00000482507 ZFP36L1Q07352 338 aaKnown RBP13.08□□□□□ -0.32
ATG4B-220ENST00000482507 RSPO4Q2I0M5 234 aaPredicted RBP13.08□□□□□ -0.32
ATG4B-220ENST00000482507 VAX1Q5SQQ9 334 aa13.08□□□□□ -0.32
ATG4B-220ENST00000482507 CLEC18BQ6UXF7 455 aa13.08□□□□□ -0.32
ATG4B-220ENST00000482507 TMEM17Q86X19 198 aa13.08□□□□□ -0.32
ATG4B-220ENST00000482507 ARMC10Q8N2F6 343 aa13.08□□□□□ -0.32
ATG4B-220ENST00000482507 OR2M3Q8NG83 312 aa13.08□□□□□ -0.32
ATG4B-220ENST00000482507 OR5D18Q8NGL1 313 aa13.08□□□□□ -0.32
ATG4B-220ENST00000482507 OR13G1Q8NGZ3 307 aa13.08□□□□□ -0.32
ATG4B-220ENST00000482507 KCNG3Q8TAE7 436 aa13.08□□□□□ -0.32
ATG4B-220ENST00000482507 MAFIPQ8WZ33 124 aa13.08□□□□□ -0.32
ATG4B-220ENST00000482507 LYZL4Q96KX0 146 aa13.08□□□□□ -0.32
ATG4B-220ENST00000482507 PRRX2Q99811 253 aa13.08□□□□□ -0.32
ATG4B-220ENST00000482507 RTBDNQ9BSG5 229 aaPredicted RBP13.08□□□□□ -0.32
ATG4B-220ENST00000482507 TMEM59Q9BXS4 323 aa13.08□□□□□ -0.32
ATG4B-220ENST00000482507 MOB1AQ9H8S9 216 aa13.08□□□□□ -0.32
ATG4B-220ENST00000482507 AKIRIN1Q9H9L7 192 aaPredicted RBP13.08□□□□□ -0.32
ATG4B-220ENST00000482507 ZC4H2Q9NQZ6 224 aa13.08□□□□□ -0.32
ATG4B-220ENST00000482507 DUX4Q9UBX2 424 aa13.08□□□□□ -0.32
ATG4B-220ENST00000482507 FAM186AA6NE01 2351 aa13.08□□□□□ -0.32
ATG4B-220ENST00000482507 DLL1O00548 723 aa13.08□□□□□ -0.32
ATG4B-220ENST00000482507 TOX3O15405 576 aaPredicted RBP13.08□□□□□ -0.32
ATG4B-220ENST00000482507 ADCYAP1P18509 176 aa13.08□□□□□ -0.32
ATG4B-220ENST00000482507 CCL1P22362 96 aa13.08□□□□□ -0.32
ATG4B-220ENST00000482507 SRSF3P84103 164 aaKnown RBP13.08□□□□□ -0.32
ATG4B-220ENST00000482507 HIST3H3Q16695 136 aa13.08□□□□□ -0.32
ATG4B-220ENST00000482507 ANKRD55Q3KP44 614 aa13.08□□□□□ -0.32
ATG4B-220ENST00000482507 TMEM128Q5BJH2 165 aa13.08□□□□□ -0.32
ATG4B-220ENST00000482507 DHRS13Q6UX07 377 aa13.08□□□□□ -0.32
ATG4B-220ENST00000482507 ASCL5Q7RTU5 278 aa13.08□□□□□ -0.32
ATG4B-220ENST00000482507 WDSUB1Q8N9V3 476 aa13.08□□□□□ -0.32
ATG4B-220ENST00000482507 DEFB124Q8NES8 71 aa13.08□□□□□ -0.32
ATG4B-220ENST00000482507 WNT2BQ93097 391 aa13.08□□□□□ -0.32
ATG4B-220ENST00000482507 MARC2Q969Z3 335 aa13.08□□□□□ -0.32
ATG4B-220ENST00000482507 AIFM2Q9BRQ8 373 aa13.08□□□□□ -0.32
ATG4B-220ENST00000482507 NMES1Q9C002 83 aa13.08□□□□□ -0.32
ATG4B-220ENST00000482507 A0A0B4J2A0 478 aa13.07□□□□□ -0.32
ATG4B-220ENST00000482507 CEACAM18A8MTB9 384 aa13.07□□□□□ -0.32
ATG4B-220ENST00000482507 SDCBPO00560 298 aaPredicted RBP13.07□□□□□ -0.32
ATG4B-220ENST00000482507 AADACL3Q5VUY0 350 aa13.07□□□□□ -0.32
ATG4B-220ENST00000482507 OR14K1Q8NGZ2 314 aa13.07□□□□□ -0.32
ATG4B-220ENST00000482507 OR6X1Q8NH79 312 aa13.07□□□□□ -0.32
ATG4B-220ENST00000482507 STOML3Q8TAV4 291 aa13.07□□□□□ -0.32
ATG4B-220ENST00000482507 NPRL2Q8WTW4 380 aa13.07□□□□□ -0.32
ATG4B-220ENST00000482507 NKX6-2Q9C056 277 aaPredicted RBP13.07□□□□□ -0.32
ATG4B-220ENST00000482507 PIGMQ9H3S5 423 aa13.07□□□□□ -0.32
ATG4B-220ENST00000482507 OR5AC2Q9NZP5 309 aa13.07□□□□□ -0.32
ATG4B-220ENST00000482507 SHPKQ9UHJ6 478 aa13.07□□□□□ -0.32
ATG4B-220ENST00000482507 SCRG1O75711 98 aa13.07□□□□□ -0.32
ATG4B-220ENST00000482507 DKK1O94907 266 aa13.07□□□□□ -0.32
ATG4B-220ENST00000482507 SFT2D2O95562 160 aa13.07□□□□□ -0.32
ATG4B-220ENST00000482507 ACTL6AO96019 429 aa13.07□□□□□ -0.32
ATG4B-220ENST00000482507 MSX1P28360 303 aa13.07□□□□□ -0.32
ATG4B-220ENST00000482507 TAS2R31P59538 309 aa13.07□□□□□ -0.32
ATG4B-220ENST00000482507 TRIP6Q15654 476 aaKnown RBP13.07□□□□□ -0.32
ATG4B-220ENST00000482507 SGCAQ16586 387 aa13.07□□□□□ -0.32
ATG4B-220ENST00000482507 TMEM176BQ3YBM2 270 aaPredicted RBP13.07□□□□□ -0.32
ATG4B-220ENST00000482507 PGAP1Q75T13 922 aa13.07□□□□□ -0.32
ATG4B-220ENST00000482507 CPEB2Q7Z5Q1 589 aaKnown RBP13.07□□□□□ -0.32
ATG4B-220ENST00000482507 ZNF283Q8N7M2 679 aa13.07□□□□□ -0.32
ATG4B-220ENST00000482507 ADPRHL1Q8NDY3 354 aa13.07□□□□□ -0.32
ATG4B-220ENST00000482507 SPSB2Q99619 263 aa13.07□□□□□ -0.32
ATG4B-220ENST00000482507 OCSTAMPQ9BR26 566 aa13.07□□□□□ -0.32
ATG4B-220ENST00000482507 CEP250Q9BV73 2442 aa13.06□□□□□ -0.32
ATG4B-220ENST00000482507 RTTNQ86VV8 2226 aa13.06□□□□□ -0.32
ATG4B-220ENST00000482507 GPR31O00270 319 aa13.06□□□□□ -0.32
ATG4B-220ENST00000482507 TSPAN9O75954 239 aa13.06□□□□□ -0.32
ATG4B-220ENST00000482507 HTR3BO95264 441 aa13.06□□□□□ -0.32
ATG4B-220ENST00000482507 WDPCPO95876 746 aa13.06□□□□□ -0.32
ATG4B-220ENST00000482507 ZNF169Q14929 603 aaPredicted RBP13.06□□□□□ -0.32
ATG4B-220ENST00000482507 PHYHD1Q5SRE7 291 aa13.06□□□□□ -0.32
ATG4B-220ENST00000482507 ZNF385CQ66K41 422 aaPredicted RBP13.06□□□□□ -0.32
ATG4B-220ENST00000482507 PEG10Q86TG7 708 aaKnown RBP13.06□□□□□ -0.32
ATG4B-220ENST00000482507 ARRDC1Q8N5I2 433 aa13.06□□□□□ -0.32
ATG4B-220ENST00000482507 PAQR8Q8TEZ7 354 aa13.06□□□□□ -0.32
ATG4B-220ENST00000482507 OR10C1Q96KK4 312 aa13.06□□□□□ -0.32
ATG4B-220ENST00000482507 OXGR1Q96P68 337 aa13.06□□□□□ -0.32
ATG4B-220ENST00000482507 GPER1Q99527 375 aa13.06□□□□□ -0.32
ATG4B-220ENST00000482507 ST6GALNAC5Q9BVH7 336 aa13.06□□□□□ -0.32
ATG4B-220ENST00000482507 ZNF416Q9BWM5 594 aa13.06□□□□□ -0.32
ATG4B-220ENST00000482507 RARRES3Q9UL19 164 aa13.06□□□□□ -0.32
ATG4B-220ENST00000482507 FLVCR1Q9Y5Y0 555 aa13.06□□□□□ -0.32
ATG4B-220ENST00000482507 SPAARA0A1B0GVQ0 90 aa13.05□□□□□ -0.32
ATG4B-220ENST00000482507 FOXI3A8MTJ6 420 aaPredicted RBP13.05□□□□□ -0.32
ATG4B-220ENST00000482507 ABCD4O14678 606 aa13.05□□□□□ -0.32
ATG4B-220ENST00000482507 ACY1Q03154 408 aa13.05□□□□□ -0.32
ATG4B-220ENST00000482507 KCNMB1Q16558 191 aa13.05□□□□□ -0.32
ATG4B-220ENST00000482507 GUCA2BQ16661 112 aa13.05□□□□□ -0.32
ATG4B-220ENST00000482507 PLEKHN1Q494U1 663 aaPredicted RBP13.05□□□□□ -0.32
ATG4B-220ENST00000482507 PDSS1Q5T2R2 415 aa13.05□□□□□ -0.32
ATG4B-220ENST00000482507 PRAMEF20Q5VT98 475 aa13.05□□□□□ -0.32
ATG4B-220ENST00000482507 LHFPL1Q86WI0 220 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms