RNA–Protein interactions for RNA: ENST00000482272.5

CTDSP1-208, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-208ENST00000482272 DUX4L3P0CJ86 424 aa11.11□□□□□ -0.63
CTDSP1-208ENST00000482272 DUX4L4P0CJ87 422 aa11.11□□□□□ -0.63
CTDSP1-208ENST00000482272 DUX4L5P0CJ88 424 aa11.11□□□□□ -0.63
CTDSP1-208ENST00000482272 DUX4L6P0CJ89 424 aa11.11□□□□□ -0.63
CTDSP1-208ENST00000482272 DUX4L7P0CJ90 424 aa11.11□□□□□ -0.63
CTDSP1-208ENST00000482272 OMGP23515 440 aa11.11□□□□□ -0.63
CTDSP1-208ENST00000482272 CSNK2BP67870 215 aa11.11□□□□□ -0.63
CTDSP1-208ENST00000482272 CDONQ4KMG0 1287 aa11.11□□□□□ -0.63
CTDSP1-208ENST00000482272 LRRC10Q5BKY1 277 aa11.11□□□□□ -0.63
CTDSP1-208ENST00000482272 DUX4L9Q6RFH8 374 aaPredicted RBP11.11□□□□□ -0.63
CTDSP1-208ENST00000482272 KCTD8Q6ZWB6 473 aa11.11□□□□□ -0.63
CTDSP1-208ENST00000482272 KRT77Q7Z794 578 aa11.11□□□□□ -0.63
CTDSP1-208ENST00000482272 CMTM4Q8IZR5 234 aa11.11□□□□□ -0.63
CTDSP1-208ENST00000482272 BBS1Q8NFJ9 593 aa11.11□□□□□ -0.63
CTDSP1-208ENST00000482272 OR10Z1Q8NGY1 313 aa11.11□□□□□ -0.63
CTDSP1-208ENST00000482272 OR4F5Q8NH21 305 aa11.11□□□□□ -0.63
CTDSP1-208ENST00000482272 ITPKCQ96DU7 683 aa11.11□□□□□ -0.63
CTDSP1-208ENST00000482272 SEH1LQ96EE3 360 aa11.11□□□□□ -0.63
CTDSP1-208ENST00000482272 RNF170Q96K19 258 aa11.11□□□□□ -0.63
CTDSP1-208ENST00000482272 FGF23Q9GZV9 251 aaPredicted RBP11.11□□□□□ -0.63
CTDSP1-208ENST00000482272 TLNRD1Q9H1K6 362 aa11.11□□□□□ -0.63
CTDSP1-208ENST00000482272 DNAJB11Q9UBS4 358 aa11.11□□□□□ -0.63
CTDSP1-208ENST00000482272 DUX4Q9UBX2 424 aa11.11□□□□□ -0.63
CTDSP1-208ENST00000482272 KPTNQ9Y664 436 aa11.11□□□□□ -0.63
CTDSP1-208ENST00000482272 GYG2O15488 501 aa11.1□□□□□ -0.63
CTDSP1-208ENST00000482272 KNG1P01042 644 aa11.1□□□□□ -0.63
CTDSP1-208ENST00000482272 PRKACGP22612 351 aa11.1□□□□□ -0.63
CTDSP1-208ENST00000482272 TGM4P49221 684 aa11.1□□□□□ -0.63
CTDSP1-208ENST00000482272 RPL15P61313 204 aaKnown RBP11.1□□□□□ -0.63
CTDSP1-208ENST00000482272 PRDX4Q13162 271 aa11.1□□□□□ -0.63
CTDSP1-208ENST00000482272 WDR38Q5JTN6 314 aa11.1□□□□□ -0.63
CTDSP1-208ENST00000482272 ATPAF1Q5TC12 328 aaPredicted RBP11.1□□□□□ -0.63
CTDSP1-208ENST00000482272 KCTD18Q6PI47 426 aaPredicted RBP11.1□□□□□ -0.63
CTDSP1-208ENST00000482272 VMO1Q7Z5L0 202 aa11.1□□□□□ -0.63
CTDSP1-208ENST00000482272 SPATA24Q86W54 205 aa11.1□□□□□ -0.63
CTDSP1-208ENST00000482272 SSMEM1Q8WWF3 244 aa11.1□□□□□ -0.63
CTDSP1-208ENST00000482272 OR5P3Q8WZ94 311 aa11.1□□□□□ -0.63
CTDSP1-208ENST00000482272 ITFG2Q969R8 447 aa11.1□□□□□ -0.63
CTDSP1-208ENST00000482272 SLC7A6OSQ96CW6 309 aaPredicted RBP11.1□□□□□ -0.63
CTDSP1-208ENST00000482272 CHIAQ9BZP6 476 aa11.1□□□□□ -0.63
CTDSP1-208ENST00000482272 DNTTIP1Q9H147 329 aa11.1□□□□□ -0.63
CTDSP1-208ENST00000482272 FAM53CQ9NYF3 392 aa11.1□□□□□ -0.63
CTDSP1-208ENST00000482272 HAO2Q9NYQ3 351 aa11.1□□□□□ -0.63
CTDSP1-208ENST00000482272 DNAJB9Q9UBS3 223 aa11.1□□□□□ -0.63
CTDSP1-208ENST00000482272 LAMP5Q9UJQ1 280 aa11.1□□□□□ -0.63
CTDSP1-208ENST00000482272 CAB39Q9Y376 341 aaPredicted RBP11.1□□□□□ -0.63
CTDSP1-208ENST00000482272 ACOD1A6NK06 481 aa11.09□□□□□ -0.63
CTDSP1-208ENST00000482272 PRR32B1ATL7 298 aa11.09□□□□□ -0.63
CTDSP1-208ENST00000482272 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.09□□□□□ -0.63
CTDSP1-208ENST00000482272 ALOX5APP20292 161 aa11.09□□□□□ -0.63
CTDSP1-208ENST00000482272 MAP2K3P46734 347 aa11.09□□□□□ -0.63
CTDSP1-208ENST00000482272 RAG2P55895 527 aa11.09□□□□□ -0.63
CTDSP1-208ENST00000482272 PSMA6P60900 246 aaKnown RBP11.09□□□□□ -0.63
CTDSP1-208ENST00000482272 CBX1P83916 185 aa11.09□□□□□ -0.63
CTDSP1-208ENST00000482272 IKZF1Q13422 519 aa11.09□□□□□ -0.63
CTDSP1-208ENST00000482272 FLOT2Q14254 428 aa11.09□□□□□ -0.63
CTDSP1-208ENST00000482272 SNAPC1Q16533 368 aa11.09□□□□□ -0.63
CTDSP1-208ENST00000482272 DNAL1Q4LDG9 190 aa11.09□□□□□ -0.63
CTDSP1-208ENST00000482272 FAM76BQ5HYJ3 339 aa11.09□□□□□ -0.63
CTDSP1-208ENST00000482272 TMEM236Q5W0B7 351 aa11.09□□□□□ -0.63
CTDSP1-208ENST00000482272 DEGS2Q6QHC5 323 aa11.09□□□□□ -0.63
CTDSP1-208ENST00000482272 C17orf107Q6ZR85 190 aa11.09□□□□□ -0.63
CTDSP1-208ENST00000482272 ZDHHC23Q8IYP9 409 aa11.09□□□□□ -0.63
CTDSP1-208ENST00000482272 PAPD5Q8NDF8 572 aaKnown RBP11.09□□□□□ -0.63
CTDSP1-208ENST00000482272 LY6G5BQ8NDX9 201 aa11.09□□□□□ -0.63
CTDSP1-208ENST00000482272 OR5T2Q8NGG2 359 aa11.09□□□□□ -0.63
CTDSP1-208ENST00000482272 NPRL2Q8WTW4 380 aa11.09□□□□□ -0.63
CTDSP1-208ENST00000482272 DYRK2Q92630 601 aa11.09□□□□□ -0.63
CTDSP1-208ENST00000482272 RPL3LQ92901 407 aaKnown RBP11.09□□□□□ -0.63
CTDSP1-208ENST00000482272 MED30Q96HR3 178 aa11.09□□□□□ -0.63
CTDSP1-208ENST00000482272 LYZL4Q96KX0 146 aa11.09□□□□□ -0.63
CTDSP1-208ENST00000482272 PKP2Q99959 881 aa11.09□□□□□ -0.63
CTDSP1-208ENST00000482272 MROQ9BYG7 248 aa11.09□□□□□ -0.63
CTDSP1-208ENST00000482272 YIPF3Q9GZM5 350 aa11.09□□□□□ -0.63
CTDSP1-208ENST00000482272 DPAGT1Q9H3H5 408 aa11.09□□□□□ -0.63
CTDSP1-208ENST00000482272 TVP23BQ9NYZ1 205 aa11.09□□□□□ -0.63
CTDSP1-208ENST00000482272 ONECUT1Q9UBC0 465 aa11.09□□□□□ -0.63
CTDSP1-208ENST00000482272 FAM96BQ9Y3D0 163 aa11.09□□□□□ -0.63
CTDSP1-208ENST00000482272 LRP12Q9Y561 859 aa11.09□□□□□ -0.63
CTDSP1-208ENST00000482272 TMEM269A0A1B0GVZ9 245 aa11.08□□□□□ -0.64
CTDSP1-208ENST00000482272 NKX6-3A6NJ46 265 aa11.08□□□□□ -0.64
CTDSP1-208ENST00000482272 GSC2O15499 205 aa11.08□□□□□ -0.64
CTDSP1-208ENST00000482272 FKBP6O75344 327 aa11.08□□□□□ -0.64
CTDSP1-208ENST00000482272 NDUFA7O95182 113 aa11.08□□□□□ -0.64
CTDSP1-208ENST00000482272 TFF1P04155 84 aa11.08□□□□□ -0.64
CTDSP1-208ENST00000482272 AMY2BP19961 511 aa11.08□□□□□ -0.64
CTDSP1-208ENST00000482272 SLC2A5P22732 501 aa11.08□□□□□ -0.64
CTDSP1-208ENST00000482272 EEF1B2P24534 225 aaKnown RBP11.08□□□□□ -0.64
CTDSP1-208ENST00000482272 ACKR3P25106 362 aa11.08□□□□□ -0.64
CTDSP1-208ENST00000482272 IER3P46695 156 aa11.08□□□□□ -0.64
CTDSP1-208ENST00000482272 HCCSP53701 268 aa11.08□□□□□ -0.64
CTDSP1-208ENST00000482272 CRISP1P54107 249 aa11.08□□□□□ -0.64
CTDSP1-208ENST00000482272 GMFBP60983 142 aa11.08□□□□□ -0.64
CTDSP1-208ENST00000482272 GUCA2AQ02747 115 aa11.08□□□□□ -0.64
CTDSP1-208ENST00000482272 APOFQ13790 326 aa11.08□□□□□ -0.64
CTDSP1-208ENST00000482272 OLFML2AQ68BL7 652 aa11.08□□□□□ -0.64
CTDSP1-208ENST00000482272 METAP1DQ6UB28 335 aaPredicted RBP11.08□□□□□ -0.64
CTDSP1-208ENST00000482272 TREML4Q6UXN2 200 aa11.08□□□□□ -0.64
CTDSP1-208ENST00000482272 TRPM8Q7Z2W7 1104 aa11.08□□□□□ -0.64
CTDSP1-208ENST00000482272 THAP5Q7Z6K1 395 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms