RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 ZFP64Q9NPA5 681 aa10.09□□□□□ -0.79
SMPD4-218ENST00000482171 UFSP2Q9NUQ7 469 aa10.09□□□□□ -0.79
SMPD4-218ENST00000482171 OPN4Q9UHM6 478 aa10.09□□□□□ -0.79
SMPD4-218ENST00000482171 FOXJ3Q9UPW0 622 aa10.09□□□□□ -0.79
SMPD4-218ENST00000482171 PCDHGA9Q9Y5G4 932 aaKnown RBP10.09□□□□□ -0.79
SMPD4-218ENST00000482171 TRAPPC2LH3BP13 241 aa10.09□□□□□ -0.79
SMPD4-218ENST00000482171 PLPP3O14495 311 aa10.09□□□□□ -0.79
SMPD4-218ENST00000482171 TOX3O15405 576 aaPredicted RBP10.09□□□□□ -0.79
SMPD4-218ENST00000482171 GDF9O60383 454 aa10.09□□□□□ -0.79
SMPD4-218ENST00000482171 TIAF1O95411 115 aa10.09□□□□□ -0.79
SMPD4-218ENST00000482171 IGHA1P01876 353 aa10.09□□□□□ -0.79
SMPD4-218ENST00000482171 CXCL2P19875 107 aa10.09□□□□□ -0.79
SMPD4-218ENST00000482171 DSCR4P56555 118 aaPredicted RBP10.09□□□□□ -0.79
SMPD4-218ENST00000482171 GRB2P62993 217 aaKnown RBP10.09□□□□□ -0.79
SMPD4-218ENST00000482171 ZXDAP98168 799 aa10.09□□□□□ -0.79
SMPD4-218ENST00000482171 FBXW12Q6X9E4 464 aa10.09□□□□□ -0.79
SMPD4-218ENST00000482171 OR56B1Q8NGI3 324 aa10.09□□□□□ -0.79
SMPD4-218ENST00000482171 MARCH1Q8TCQ1 289 aa10.09□□□□□ -0.79
SMPD4-218ENST00000482171 ADAT1Q9BUB4 502 aaKnown RBP10.09□□□□□ -0.79
SMPD4-218ENST00000482171 RHOFQ9HBH0 211 aa10.09□□□□□ -0.79
SMPD4-218ENST00000482171 CRLF2Q9HC73 371 aa10.09□□□□□ -0.79
SMPD4-218ENST00000482171 CACNA1DQ01668 2161 aa10.09□□□□□ -0.79
SMPD4-218ENST00000482171 SMCO3A2RU48 225 aa10.08□□□□□ -0.8
SMPD4-218ENST00000482171 OR2M5A3KFT3 312 aa10.08□□□□□ -0.8
SMPD4-218ENST00000482171 ANKRD34CP0C6C1 535 aa10.08□□□□□ -0.8
SMPD4-218ENST00000482171 DOC2BQ14184 412 aa10.08□□□□□ -0.8
SMPD4-218ENST00000482171 OR1C1Q15619 314 aa10.08□□□□□ -0.8
SMPD4-218ENST00000482171 LAMTOR1Q6IAA8 161 aa10.08□□□□□ -0.8
SMPD4-218ENST00000482171 OGFOD3Q6PK18 319 aa10.08□□□□□ -0.8
SMPD4-218ENST00000482171 SLC22A25Q6T423 547 aa10.08□□□□□ -0.8
SMPD4-218ENST00000482171 CT55Q8WUE5 264 aa10.08□□□□□ -0.8
SMPD4-218ENST00000482171 DNASE2BQ8WZ79 361 aa10.08□□□□□ -0.8
SMPD4-218ENST00000482171 FRZBQ92765 325 aa10.08□□□□□ -0.8
SMPD4-218ENST00000482171 AKR1E2Q96JD6 320 aa10.08□□□□□ -0.8
SMPD4-218ENST00000482171 EXOSC3Q9NQT5 275 aaKnown RBP10.08□□□□□ -0.8
SMPD4-218ENST00000482171 TCFL5Q9UL49 500 aa10.08□□□□□ -0.8
SMPD4-218ENST00000482171 ZFHX2Q9C0A1 2572 aaPredicted RBP10.08□□□□□ -0.8
SMPD4-218ENST00000482171 PCNX1Q96RV3 2341 aa10.08□□□□□ -0.8
SMPD4-218ENST00000482171 A0A087WZY1 265 aa10.08□□□□□ -0.8
SMPD4-218ENST00000482171 FAM221AA4D161 298 aa10.08□□□□□ -0.8
SMPD4-218ENST00000482171 SDCBPO00560 298 aaPredicted RBP10.08□□□□□ -0.8
SMPD4-218ENST00000482171 SEMA7AO75326 666 aa10.08□□□□□ -0.8
SMPD4-218ENST00000482171 GLSO94925 669 aaPredicted RBP10.08□□□□□ -0.8
SMPD4-218ENST00000482171 ZIC2O95409 532 aaPredicted RBP10.08□□□□□ -0.8
SMPD4-218ENST00000482171 FAHP16930 419 aa10.08□□□□□ -0.8
SMPD4-218ENST00000482171 EPHA1P21709 976 aa10.08□□□□□ -0.8
SMPD4-218ENST00000482171 IKZF1Q13422 519 aa10.08□□□□□ -0.8
SMPD4-218ENST00000482171 HMGN3Q15651 99 aa10.08□□□□□ -0.8
SMPD4-218ENST00000482171 RFLNBQ8N5W9 214 aa10.08□□□□□ -0.8
SMPD4-218ENST00000482171 NUBPLQ8TB37 319 aa10.08□□□□□ -0.8
SMPD4-218ENST00000482171 NICN1Q9BSH3 213 aa10.08□□□□□ -0.8
SMPD4-218ENST00000482171 NELFAQ9H3P2 528 aa10.08□□□□□ -0.8
SMPD4-218ENST00000482171 AKIRIN1Q9H9L7 192 aaPredicted RBP10.08□□□□□ -0.8
SMPD4-218ENST00000482171 FAM86C1Q9NVL1 165 aa10.08□□□□□ -0.8
SMPD4-218ENST00000482171 KLF13Q9Y2Y9 288 aaPredicted RBP10.08□□□□□ -0.8
SMPD4-218ENST00000482171 MYLKQ15746 1914 aa10.08□□□□□ -0.8
SMPD4-218ENST00000482171 AKAP6Q13023 2319 aa10.08□□□□□ -0.8
SMPD4-218ENST00000482171 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.08□□□□□ -0.8
SMPD4-218ENST00000482171 ITGB2P05107 769 aa10.08□□□□□ -0.8
SMPD4-218ENST00000482171 NAGAP17050 411 aa10.08□□□□□ -0.8
SMPD4-218ENST00000482171 FKBP2P26885 142 aaKnown RBP10.08□□□□□ -0.8
SMPD4-218ENST00000482171 TAGLN2P37802 199 aaKnown RBP10.08□□□□□ -0.8
SMPD4-218ENST00000482171 SLC25A1P53007 311 aa10.08□□□□□ -0.8
SMPD4-218ENST00000482171 FABP9Q0Z7S8 132 aa10.08□□□□□ -0.8
SMPD4-218ENST00000482171 NKAIN3Q8N8D7 197 aa10.08□□□□□ -0.8
SMPD4-218ENST00000482171 OR9K2Q8NGE7 335 aa10.08□□□□□ -0.8
SMPD4-218ENST00000482171 C4orf45Q96LM5 186 aa10.08□□□□□ -0.8
SMPD4-218ENST00000482171 MTFP1Q9UDX5 166 aa10.08□□□□□ -0.8
SMPD4-218ENST00000482171 PLXNA3P51805 1871 aa10.08□□□□□ -0.8
SMPD4-218ENST00000482171 FAM74A7A6NL05 159 aa10.07□□□□□ -0.8
SMPD4-218ENST00000482171 HMSDA8MTL9 139 aa10.07□□□□□ -0.8
SMPD4-218ENST00000482171 UMAD1C9J7I0 102 aa10.07□□□□□ -0.8
SMPD4-218ENST00000482171 HRH1P35367 487 aa10.07□□□□□ -0.8
SMPD4-218ENST00000482171 KCNJ3P48549 501 aa10.07□□□□□ -0.8
SMPD4-218ENST00000482171 EFNA3P52797 238 aa10.07□□□□□ -0.8
SMPD4-218ENST00000482171 RNF212Q495C1 297 aa10.07□□□□□ -0.8
SMPD4-218ENST00000482171 FAM74A3Q4VXF1 159 aa10.07□□□□□ -0.8
SMPD4-218ENST00000482171 ELFN2Q5R3F8 820 aa10.07□□□□□ -0.8
SMPD4-218ENST00000482171 HIST2H3AQ71DI3 136 aa10.07□□□□□ -0.8
SMPD4-218ENST00000482171 TMPRSS7Q7RTY8 843 aa10.07□□□□□ -0.8
SMPD4-218ENST00000482171 ZNF695Q8IW36 515 aa10.07□□□□□ -0.8
SMPD4-218ENST00000482171 ZNF561Q8N587 486 aa10.07□□□□□ -0.8
SMPD4-218ENST00000482171 NOXO1Q8NFA2 376 aa10.07□□□□□ -0.8
SMPD4-218ENST00000482171 OR10AC1Q8NH08 325 aa10.07□□□□□ -0.8
SMPD4-218ENST00000482171 HGDQ93099 445 aa10.07□□□□□ -0.8
SMPD4-218ENST00000482171 DNAJB11Q9UBS4 358 aa10.07□□□□□ -0.8
SMPD4-218ENST00000482171 ANAPC1Q9H1A4 1944 aa10.07□□□□□ -0.8
SMPD4-218ENST00000482171 SPAARA0A1B0GVQ0 90 aa10.07□□□□□ -0.8
SMPD4-218ENST00000482171 ALOX5APP20292 161 aa10.07□□□□□ -0.8
SMPD4-218ENST00000482171 DHRS2Q13268 280 aa10.07□□□□□ -0.8
SMPD4-218ENST00000482171 TRIP6Q15654 476 aaKnown RBP10.07□□□□□ -0.8
SMPD4-218ENST00000482171 LTC4SQ16873 150 aa10.07□□□□□ -0.8
SMPD4-218ENST00000482171 DOK3Q7L591 496 aa10.07□□□□□ -0.8
SMPD4-218ENST00000482171 SEMA6DQ8NFY4 1073 aa10.07□□□□□ -0.8
SMPD4-218ENST00000482171 OR2V1Q8NHB1 315 aa10.07□□□□□ -0.8
SMPD4-218ENST00000482171 MRM2Q9UI43 246 aaKnown RBP10.07□□□□□ -0.8
SMPD4-218ENST00000482171 RAB22AQ9UL26 194 aa10.07□□□□□ -0.8
SMPD4-218ENST00000482171 ICAM5Q9UMF0 924 aa10.07□□□□□ -0.8
SMPD4-218ENST00000482171 RALGAPA1Q6GYQ0 2036 aa10.07□□□□□ -0.8
SMPD4-218ENST00000482171 C5orf49A4QMS7 147 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms