RNA–Protein interactions for RNA: ENST00000481242.5

GARNL3-216, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 4,816 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-216ENST00000481242 SLX1AQ9BQ83 275 aa8.48□□□□□ -1.05
GARNL3-216ENST00000481242 ZNF2Q9BSG1 426 aaPredicted RBP8.48□□□□□ -1.05
GARNL3-216ENST00000481242 MPC1Q9Y5U8 109 aa8.48□□□□□ -1.05
GARNL3-216ENST00000481242 HSD17B6O14756 317 aa8.48□□□□□ -1.05
GARNL3-216ENST00000481242 KLF3P57682 345 aaPredicted RBP8.48□□□□□ -1.05
GARNL3-216ENST00000481242 RPS16P62249 146 aaKnown RBP8.48□□□□□ -1.05
GARNL3-216ENST00000481242 PDZK1IP1Q13113 114 aa8.48□□□□□ -1.05
GARNL3-216ENST00000481242 ZNF674Q2M3X9 581 aa8.48□□□□□ -1.05
GARNL3-216ENST00000481242 C2orf76Q3KRA6 126 aa8.48□□□□□ -1.05
GARNL3-216ENST00000481242 SOWAHCQ53LP3 525 aaPredicted RBP8.48□□□□□ -1.05
GARNL3-216ENST00000481242 KHDC1LQ5JSQ8 128 aa8.48□□□□□ -1.05
GARNL3-216ENST00000481242 OR2I1PQ8NGU4 316 aa8.48□□□□□ -1.05
GARNL3-216ENST00000481242 PAQR8Q8TEZ7 354 aa8.48□□□□□ -1.05
GARNL3-216ENST00000481242 CHAC2Q8WUX2 184 aa8.48□□□□□ -1.05
GARNL3-216ENST00000481242 ADAT1Q9BUB4 502 aaKnown RBP8.48□□□□□ -1.05
GARNL3-216ENST00000481242 SLC23A1Q9UHI7 598 aa8.48□□□□□ -1.05
GARNL3-216ENST00000481242 SLC22A13Q9Y226 551 aa8.48□□□□□ -1.05
GARNL3-216ENST00000481242 ZDBF2Q9HCK1 2354 aa8.48□□□□□ -1.05
GARNL3-216ENST00000481242 LY75O60449 1722 aa8.48□□□□□ -1.05
GARNL3-216ENST00000481242 TCRBV16S1A1N1A0A5B0 115 aa8.48□□□□□ -1.05
GARNL3-216ENST00000481242 EPPINO95925 133 aa8.48□□□□□ -1.05
GARNL3-216ENST00000481242 TEX30Q5JUR7 227 aa8.48□□□□□ -1.05
GARNL3-216ENST00000481242 TMEM179BQ7Z7N9 219 aa8.48□□□□□ -1.05
GARNL3-216ENST00000481242 C15orf54Q8N8G6 183 aa8.48□□□□□ -1.05
GARNL3-216ENST00000481242 SEC22AQ96IW7 307 aa8.48□□□□□ -1.05
GARNL3-216ENST00000481242 TOLLIPQ9H0E2 274 aa8.48□□□□□ -1.05
GARNL3-216ENST00000481242 CHST2Q9Y4C5 530 aa8.48□□□□□ -1.05
GARNL3-216ENST00000481242 AGPAT2O15120 278 aa8.47□□□□□ -1.05
GARNL3-216ENST00000481242 PRKNO60260 465 aaPredicted RBP8.47□□□□□ -1.05
GARNL3-216ENST00000481242 CELA2BP08218 269 aaPredicted RBP8.47□□□□□ -1.05
GARNL3-216ENST00000481242 RAB6AP20340 208 aa8.47□□□□□ -1.05
GARNL3-216ENST00000481242 MDH2P40926 338 aaKnown RBP8.47□□□□□ -1.05
GARNL3-216ENST00000481242 PSMB3P49720 205 aa8.47□□□□□ -1.05
GARNL3-216ENST00000481242 PPT1P50897 306 aa8.47□□□□□ -1.05
GARNL3-216ENST00000481242 LSM6P62312 80 aaKnown RBP8.47□□□□□ -1.05
GARNL3-216ENST00000481242 VMA21Q3ZAQ7 101 aa8.47□□□□□ -1.05
GARNL3-216ENST00000481242 ABLIM2Q6H8Q1 611 aa8.47□□□□□ -1.05
GARNL3-216ENST00000481242 HSD17B13Q7Z5P4 300 aaPredicted RBP8.47□□□□□ -1.05
GARNL3-216ENST00000481242 MRGPREQ86SM8 312 aa8.47□□□□□ -1.05
GARNL3-216ENST00000481242 C17orf78Q8N4C9 275 aa8.47□□□□□ -1.05
GARNL3-216ENST00000481242 SMOC1Q9H4F8 434 aa8.47□□□□□ -1.05
GARNL3-216ENST00000481242 PLEKHA2Q9HB19 425 aa8.47□□□□□ -1.05
GARNL3-216ENST00000481242 KCNE3Q9Y6H6 103 aa8.47□□□□□ -1.05
GARNL3-216ENST00000481242 CROCCQ5TZA2 2017 aa8.47□□□□□ -1.05
GARNL3-216ENST00000481242 OR2M5A3KFT3 312 aa8.47□□□□□ -1.05
GARNL3-216ENST00000481242 CRYM-AS1A6NIL9 109 aa8.47□□□□□ -1.05
GARNL3-216ENST00000481242 LEUTXA8MZ59 168 aa8.47□□□□□ -1.05
GARNL3-216ENST00000481242 DHRS3O75911 302 aa8.47□□□□□ -1.05
GARNL3-216ENST00000481242 HLA-HP01893 362 aa8.47□□□□□ -1.05
GARNL3-216ENST00000481242 CLEC3BP05452 202 aa8.47□□□□□ -1.05
GARNL3-216ENST00000481242 HPNP05981 417 aa8.47□□□□□ -1.05
GARNL3-216ENST00000481242 IGHV4-34P06331 123 aa8.47□□□□□ -1.05
GARNL3-216ENST00000481242 CCL4P13236 92 aa8.47□□□□□ -1.05
GARNL3-216ENST00000481242 HLA-DOBP13765 273 aa8.47□□□□□ -1.05
GARNL3-216ENST00000481242 IGFBP7Q16270 282 aa8.47□□□□□ -1.05
GARNL3-216ENST00000481242 DCAF10Q5QP82 559 aa8.47□□□□□ -1.05
GARNL3-216ENST00000481242 PRSS41Q7RTY9 318 aa8.47□□□□□ -1.05
GARNL3-216ENST00000481242 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.47□□□□□ -1.05
GARNL3-216ENST00000481242 OR10K1Q8NGX5 313 aa8.47□□□□□ -1.05
GARNL3-216ENST00000481242 GPR119Q8TDV5 335 aa8.47□□□□□ -1.05
GARNL3-216ENST00000481242 AKR1E2Q96JD6 320 aa8.47□□□□□ -1.05
GARNL3-216ENST00000481242 DDA1Q9BW61 102 aa8.47□□□□□ -1.05
GARNL3-216ENST00000481242 KPTNQ9Y664 436 aa8.47□□□□□ -1.05
GARNL3-216ENST00000481242 TMEM235A6NFC5 223 aa8.47□□□□□ -1.05
GARNL3-216ENST00000481242 IGFBP1P08833 259 aaPredicted RBP8.47□□□□□ -1.05
GARNL3-216ENST00000481242 HNF1AP20823 631 aa8.47□□□□□ -1.05
GARNL3-216ENST00000481242 CEACAM3P40198 252 aa8.47□□□□□ -1.05
GARNL3-216ENST00000481242 MAGEB1P43366 347 aa8.47□□□□□ -1.05
GARNL3-216ENST00000481242 GABRA4P48169 554 aa8.47□□□□□ -1.05
GARNL3-216ENST00000481242 PPP1CAP62136 330 aa8.47□□□□□ -1.05
GARNL3-216ENST00000481242 GAB4Q2WGN9 574 aa8.47□□□□□ -1.05
GARNL3-216ENST00000481242 OR52I2Q8NH67 350 aa8.47□□□□□ -1.05
GARNL3-216ENST00000481242 VSTM2LQ96N03 204 aa8.47□□□□□ -1.05
GARNL3-216ENST00000481242 TXN2Q99757 166 aa8.47□□□□□ -1.05
GARNL3-216ENST00000481242 LRP12Q9Y561 859 aa8.47□□□□□ -1.05
GARNL3-216ENST00000481242 ICE1Q9Y2F5 2266 aa8.47□□□□□ -1.05
GARNL3-216ENST00000481242 ASPDHA6ND91 283 aa8.47□□□□□ -1.05
GARNL3-216ENST00000481242 JTBO76095 146 aa8.47□□□□□ -1.05
GARNL3-216ENST00000481242 GIPP09681 153 aaPredicted RBP8.47□□□□□ -1.05
GARNL3-216ENST00000481242 SOX8P57073 446 aa8.47□□□□□ -1.05
GARNL3-216ENST00000481242 RANP62826 216 aaKnown RBP8.47□□□□□ -1.05
GARNL3-216ENST00000481242 FCN2Q15485 313 aa8.47□□□□□ -1.05
GARNL3-216ENST00000481242 VASH2Q86V25 355 aa8.47□□□□□ -1.05
GARNL3-216ENST00000481242 OR10P1Q8NGE3 313 aa8.47□□□□□ -1.05
GARNL3-216ENST00000481242 FAM213BQ8TBF2 198 aa8.47□□□□□ -1.05
GARNL3-216ENST00000481242 DVL3Q92997 716 aaPredicted RBP8.47□□□□□ -1.05
GARNL3-216ENST00000481242 FBXW5Q969U6 566 aa8.47□□□□□ -1.05
GARNL3-216ENST00000481242 MOGAT1Q96PD6 335 aa8.47□□□□□ -1.05
GARNL3-216ENST00000481242 HRH4Q9H3N8 390 aa8.47□□□□□ -1.05
GARNL3-216ENST00000481242 TMEFF2Q9UIK5 374 aaPredicted RBP8.47□□□□□ -1.05
GARNL3-216ENST00000481242 FBXL2Q9UKC9 423 aa8.47□□□□□ -1.05
GARNL3-216ENST00000481242 CRYBA1P05813 215 aa8.46□□□□□ -1.05
GARNL3-216ENST00000481242 FAHP16930 419 aa8.46□□□□□ -1.05
GARNL3-216ENST00000481242 DTYMKP23919 212 aa8.46□□□□□ -1.05
GARNL3-216ENST00000481242 EVX1P49640 407 aa8.46□□□□□ -1.05
GARNL3-216ENST00000481242 PCBP3P57721 371 aaKnown RBP8.46□□□□□ -1.05
GARNL3-216ENST00000481242 CDK5Q00535 292 aa8.46□□□□□ -1.05
GARNL3-216ENST00000481242 LYPD8Q6UX82 237 aa8.46□□□□□ -1.05
GARNL3-216ENST00000481242 C10orf35Q96D05 121 aa8.46□□□□□ -1.05
GARNL3-216ENST00000481242 NUDT16L1Q9BRJ7 211 aaKnown RBP8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms