RNA–Protein interactions for RNA: ENST00000481194.1

CCM2-214, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 5,304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-214ENST00000481194 AADACL3Q5VUY0 350 aa16.98■□□□□ 0.31
CCM2-214ENST00000481194 MOB1BQ7L9L4 216 aa16.98■□□□□ 0.31
CCM2-214ENST00000481194 LINC00470Q9BZP3 86 aa16.98■□□□□ 0.31
CCM2-214ENST00000481194 SPATA46Q5T0L3 261 aa16.98■□□□□ 0.31
CCM2-214ENST00000481194 TSPO2Q5TGU0 170 aa16.98■□□□□ 0.31
CCM2-214ENST00000481194 MEX3BQ6ZN04 569 aaKnown RBP16.98■□□□□ 0.31
CCM2-214ENST00000481194 SLAMF9Q96A28 289 aa16.98■□□□□ 0.31
CCM2-214ENST00000481194 HS3ST1O14792 307 aa16.98■□□□□ 0.31
CCM2-214ENST00000481194 MDH2P40926 338 aaKnown RBP16.98■□□□□ 0.31
CCM2-214ENST00000481194 OR2T35Q8NGX2 323 aa16.98■□□□□ 0.31
CCM2-214ENST00000481194 ZPLD1Q8TCW7 415 aa16.98■□□□□ 0.31
CCM2-214ENST00000481194 TMEM54Q969K7 222 aa16.98■□□□□ 0.31
CCM2-214ENST00000481194 CMBLQ96DG6 245 aa16.98■□□□□ 0.31
CCM2-214ENST00000481194 F5H0A9 414 aaPredicted RBP16.97■□□□□ 0.31
CCM2-214ENST00000481194 CD3EP07766 207 aa16.97■□□□□ 0.31
CCM2-214ENST00000481194 KLRB1Q12918 225 aa16.97■□□□□ 0.31
CCM2-214ENST00000481194 HYAL4Q2M3T9 481 aa16.97■□□□□ 0.31
CCM2-214ENST00000481194 SPACA5Q96QH8 159 aa16.97■□□□□ 0.31
CCM2-214ENST00000481194 C16orf97H3BN30 126 aa16.97■□□□□ 0.31
CCM2-214ENST00000481194 TSPAN9O75954 239 aa16.97■□□□□ 0.31
CCM2-214ENST00000481194 OR2T2Q6IF00 324 aa16.97■□□□□ 0.31
CCM2-214ENST00000481194 ZCCHC14Q8WYQ9 949 aaKnown RBP16.97■□□□□ 0.31
CCM2-214ENST00000481194 TOR1AO14656 332 aa16.97■□□□□ 0.31
CCM2-214ENST00000481194 DGCR2P98153 550 aa16.97■□□□□ 0.31
CCM2-214ENST00000481194 PRSS45Q7RTY3 260 aa16.97■□□□□ 0.31
CCM2-214ENST00000481194 TMEM229BQ8NBD8 167 aa16.97■□□□□ 0.31
CCM2-214ENST00000481194 TMEM185AQ8NFB2 350 aa16.97■□□□□ 0.31
CCM2-214ENST00000481194 H1FXQ92522 213 aaKnown RBP16.97■□□□□ 0.31
CCM2-214ENST00000481194 HES7Q9BYE0 225 aa16.97■□□□□ 0.31
CCM2-214ENST00000481194 SRRQ9GZT4 340 aa16.97■□□□□ 0.31
CCM2-214ENST00000481194 ST6GALNAC2Q9UJ37 374 aa16.97■□□□□ 0.31
CCM2-214ENST00000481194 M0QYG6 137 aa16.97■□□□□ 0.31
CCM2-214ENST00000481194 UPK3AO75631 287 aa16.97■□□□□ 0.31
CCM2-214ENST00000481194 CSF3P09919 207 aa16.97■□□□□ 0.31
CCM2-214ENST00000481194 FUT3P21217 361 aa16.97■□□□□ 0.31
CCM2-214ENST00000481194 RPL23AP62750 156 aaKnown RBP16.97■□□□□ 0.31
CCM2-214ENST00000481194 C10orf128Q5T292 105 aa16.97■□□□□ 0.31
CCM2-214ENST00000481194 C2orf16Q68DN1 1984 aa16.96■□□□□ 0.31
CCM2-214ENST00000481194 GLRX5Q86SX6 157 aa16.96■□□□□ 0.31
CCM2-214ENST00000481194 PRELID3BQ9Y3B1 194 aa16.96■□□□□ 0.31
CCM2-214ENST00000481194 A0A0U1RQV5 110 aa16.96■□□□□ 0.31
CCM2-214ENST00000481194 THY1P04216 161 aa16.96■□□□□ 0.31
CCM2-214ENST00000481194 TRAPPC2P0DI81 140 aa16.96■□□□□ 0.31
CCM2-214ENST00000481194 TRAPPC2BP0DI82 140 aa16.96■□□□□ 0.31
CCM2-214ENST00000481194 SFXN3Q9BWM7 321 aa16.96■□□□□ 0.31
CCM2-214ENST00000481194 LSM2Q9Y333 95 aaKnown RBP16.96■□□□□ 0.31
CCM2-214ENST00000481194 OBSL1O75147 1896 aa16.96■□□□□ 0.31
CCM2-214ENST00000481194 TRAF3IP2O43734 574 aaPredicted RBP16.96■□□□□ 0.31
CCM2-214ENST00000481194 COX5BP10606 129 aa16.96■□□□□ 0.31
CCM2-214ENST00000481194 NFYAP23511 347 aaPredicted RBP16.96■□□□□ 0.31
CCM2-214ENST00000481194 CTSSP25774 331 aa16.96■□□□□ 0.31
CCM2-214ENST00000481194 SECTM1Q8WVN6 248 aa16.96■□□□□ 0.31
CCM2-214ENST00000481194 PTDSS2Q9BVG9 487 aa16.96■□□□□ 0.31
CCM2-214ENST00000481194 ZMAT3Q9HA38 289 aaKnown RBP16.96■□□□□ 0.31
CCM2-214ENST00000481194 TMEM235A6NFC5 223 aa16.96■□□□□ 0.31
CCM2-214ENST00000481194 SIRPB1O00241 398 aa16.96■□□□□ 0.31
CCM2-214ENST00000481194 SIGLEC12Q96PQ1 595 aa16.96■□□□□ 0.31
CCM2-214ENST00000481194 CYB5R1Q9UHQ9 305 aa16.96■□□□□ 0.31
CCM2-214ENST00000481194 CYB5BO43169 146 aa16.95■□□□□ 0.3
CCM2-214ENST00000481194 TNFSF10P50591 281 aa16.95■□□□□ 0.3
CCM2-214ENST00000481194 TRAT1Q6PIZ9 186 aa16.95■□□□□ 0.3
CCM2-214ENST00000481194 SRXN1Q9BYN0 137 aa16.95■□□□□ 0.3
CCM2-214ENST00000481194 SLC25A31Q9H0C2 315 aa16.95■□□□□ 0.3
CCM2-214ENST00000481194 ARL6Q9H0F7 186 aa16.95■□□□□ 0.3
CCM2-214ENST00000481194 UBQLN2Q9UHD9 624 aa16.95■□□□□ 0.3
CCM2-214ENST00000481194 ATPIF1Q9UII2 106 aa16.95■□□□□ 0.3
CCM2-214ENST00000481194 NUP50Q9UKX7 468 aa16.95■□□□□ 0.3
CCM2-214ENST00000481194 C17orf78Q8N4C9 275 aa16.95■□□□□ 0.3
CCM2-214ENST00000481194 OR2AE1Q8NHA4 323 aa16.95■□□□□ 0.3
CCM2-214ENST00000481194 ABHD5Q8WTS1 349 aa16.95■□□□□ 0.3
CCM2-214ENST00000481194 TMEM272A0A1B0GTI8 110 aa16.95■□□□□ 0.3
CCM2-214ENST00000481194 TGM1P22735 817 aa16.95■□□□□ 0.3
CCM2-214ENST00000481194 PLGLAQ15195 96 aa16.95■□□□□ 0.3
CCM2-214ENST00000481194 TAF9Q16594 264 aa16.95■□□□□ 0.3
CCM2-214ENST00000481194 ZBTB37Q5TC79 503 aa16.95■□□□□ 0.3
CCM2-214ENST00000481194 NLRC3Q7RTR2 1065 aa16.95■□□□□ 0.3
CCM2-214ENST00000481194 C12orf4Q9NQ89 552 aa16.95■□□□□ 0.3
CCM2-214ENST00000481194 EDDM3AQ14507 147 aa16.95■□□□□ 0.3
CCM2-214ENST00000481194 NMNAT2Q9BZQ4 307 aa16.95■□□□□ 0.3
CCM2-214ENST00000481194 ZNF385CQ66K41 422 aaPredicted RBP16.94■□□□□ 0.3
CCM2-214ENST00000481194 OR2Z1Q8NG97 314 aa16.94■□□□□ 0.3
CCM2-214ENST00000481194 POC1BQ8TC44 478 aa16.94■□□□□ 0.3
CCM2-214ENST00000481194 UBL7Q96S82 380 aaPredicted RBP16.94■□□□□ 0.3
CCM2-214ENST00000481194 BRWD1Q9NSI6 2320 aa16.94■□□□□ 0.3
CCM2-214ENST00000481194 MASP2O00187 686 aa16.94■□□□□ 0.3
CCM2-214ENST00000481194 SPRY1O43609 319 aaPredicted RBP16.94■□□□□ 0.3
CCM2-214ENST00000481194 GNB3P16520 340 aa16.94■□□□□ 0.3
CCM2-214ENST00000481194 NDUFB7P17568 137 aa16.94■□□□□ 0.3
CCM2-214ENST00000481194 DVL3Q92997 716 aaPredicted RBP16.94■□□□□ 0.3
CCM2-214ENST00000481194 ORAI1Q96D31 301 aa16.94■□□□□ 0.3
CCM2-214ENST00000481194 MYOZ1Q9NP98 299 aaPredicted RBP16.94■□□□□ 0.3
CCM2-214ENST00000481194 RPL19P84098 196 aaKnown RBP16.94■□□□□ 0.3
CCM2-214ENST00000481194 A0A0B4J203 849 aa16.94■□□□□ 0.3
CCM2-214ENST00000481194 LY6G6EA0A0G2JKS1 128 aa16.94■□□□□ 0.3
CCM2-214ENST00000481194 A0A1W2PR80 420 aa16.94■□□□□ 0.3
CCM2-214ENST00000481194 TMEM210A6NLX4 147 aa16.94■□□□□ 0.3
CCM2-214ENST00000481194 IFNA2P01563 188 aa16.94■□□□□ 0.3
CCM2-214ENST00000481194 PATE4P0C8F1 98 aa16.94■□□□□ 0.3
CCM2-214ENST00000481194 EPHA1P21709 976 aa16.94■□□□□ 0.3
CCM2-214ENST00000481194 C22orf15Q8WYQ4 148 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms