RNA–Protein interactions for RNA: ENST00000480956.1

LSM5-210, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM5, Length 1,736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-210ENST00000480956 GGT1P19440 569 aa6.54□□□□□ -1.36
LSM5-210ENST00000480956 INHBCP55103 352 aa6.54□□□□□ -1.36
LSM5-210ENST00000480956 DLX1P56177 255 aa6.54□□□□□ -1.36
LSM5-210ENST00000480956 SNRPD1P62314 119 aaKnown RBP6.54□□□□□ -1.36
LSM5-210ENST00000480956 KRTAP19-4Q3LI73 84 aa6.54□□□□□ -1.36
LSM5-210ENST00000480956 DHRS4L2Q6PKH6 230 aa6.54□□□□□ -1.36
LSM5-210ENST00000480956 MRPL55Q7Z7F7 128 aaKnown RBP6.54□□□□□ -1.36
LSM5-210ENST00000480956 NIT1Q86X76 327 aa6.54□□□□□ -1.36
LSM5-210ENST00000480956 RAB43Q86YS6 212 aa6.54□□□□□ -1.36
LSM5-210ENST00000480956 TMEM178AQ8NBL3 297 aa6.54□□□□□ -1.36
LSM5-210ENST00000480956 OR51Q1Q8NH59 317 aa6.54□□□□□ -1.36
LSM5-210ENST00000480956 HAVCR2Q8TDQ0 301 aa6.54□□□□□ -1.36
LSM5-210ENST00000480956 ZNF354BQ96LW1 612 aa6.54□□□□□ -1.36
LSM5-210ENST00000480956 FBXO5Q9UKT4 447 aa6.54□□□□□ -1.36
LSM5-210ENST00000480956 ADGRB1O14514 1584 aa6.54□□□□□ -1.36
LSM5-210ENST00000480956 A0A0G2JLM5 398 aa6.53□□□□□ -1.36
LSM5-210ENST00000480956 K7EQD1 137 aa6.53□□□□□ -1.36
LSM5-210ENST00000480956 UBDO15205 165 aa6.53□□□□□ -1.36
LSM5-210ENST00000480956 KLRC4O43908 158 aa6.53□□□□□ -1.36
LSM5-210ENST00000480956 ZG16O60844 167 aa6.53□□□□□ -1.36
LSM5-210ENST00000480956 CTNSO60931 367 aa6.53□□□□□ -1.36
LSM5-210ENST00000480956 TRMUO75648 421 aaKnown RBP6.53□□□□□ -1.36
LSM5-210ENST00000480956 TTC4O95801 387 aa6.53□□□□□ -1.36
LSM5-210ENST00000480956 PRSS1P07477 247 aa6.53□□□□□ -1.36
LSM5-210ENST00000480956 CTSLP07711 333 aa6.53□□□□□ -1.36
LSM5-210ENST00000480956 H2AFZP0C0S5 128 aa6.53□□□□□ -1.36
LSM5-210ENST00000480956 PAX1P15863 534 aa6.53□□□□□ -1.36
LSM5-210ENST00000480956 CCKARP32238 428 aa6.53□□□□□ -1.36
LSM5-210ENST00000480956 OR1D4P47884 311 aa6.53□□□□□ -1.36
LSM5-210ENST00000480956 ARG2P78540 354 aa6.53□□□□□ -1.36
LSM5-210ENST00000480956 POU6F1Q14863 301 aa6.53□□□□□ -1.36
LSM5-210ENST00000480956 RBMS2Q15434 407 aaKnown RBP6.53□□□□□ -1.36
LSM5-210ENST00000480956 C4orf26Q17RF5 130 aa6.53□□□□□ -1.36
LSM5-210ENST00000480956 TMEM30BQ3MIR4 351 aa6.53□□□□□ -1.36
LSM5-210ENST00000480956 YTHDF3Q7Z739 585 aaKnown RBP6.53□□□□□ -1.36
LSM5-210ENST00000480956 GPD1LQ8N335 351 aa6.53□□□□□ -1.36
LSM5-210ENST00000480956 OR52E2Q8NGJ4 325 aa6.53□□□□□ -1.36
LSM5-210ENST00000480956 OR10G7Q8NGN6 311 aa6.53□□□□□ -1.36
LSM5-210ENST00000480956 STOML3Q8TAV4 291 aa6.53□□□□□ -1.36
LSM5-210ENST00000480956 CGREF1Q99674 301 aa6.53□□□□□ -1.36
LSM5-210ENST00000480956 DOK1Q99704 481 aa6.53□□□□□ -1.36
LSM5-210ENST00000480956 GLTPQ9NZD2 209 aa6.53□□□□□ -1.36
LSM5-210ENST00000480956 SCAF11Q99590 1463 aaKnown RBP6.53□□□□□ -1.36
LSM5-210ENST00000480956 F5H5K5 113 aa6.53□□□□□ -1.36
LSM5-210ENST00000480956 C1QL1O75973 258 aa6.53□□□□□ -1.36
LSM5-210ENST00000480956 CLDN1O95832 211 aa6.53□□□□□ -1.36
LSM5-210ENST00000480956 PGA4P0DJD7 388 aa6.53□□□□□ -1.36
LSM5-210ENST00000480956 PGA3P0DJD8 388 aa6.53□□□□□ -1.36
LSM5-210ENST00000480956 PGA5P0DJD9 388 aa6.53□□□□□ -1.36
LSM5-210ENST00000480956 CD37P11049 281 aa6.53□□□□□ -1.36
LSM5-210ENST00000480956 KCNE1P15382 129 aa6.53□□□□□ -1.36
LSM5-210ENST00000480956 ADORA2BP29275 332 aa6.53□□□□□ -1.36
LSM5-210ENST00000480956 LMO4P61968 165 aa6.53□□□□□ -1.36
LSM5-210ENST00000480956 SLC35A1P78382 337 aa6.53□□□□□ -1.36
LSM5-210ENST00000480956 SMCO1Q147U7 214 aa6.53□□□□□ -1.36
LSM5-210ENST00000480956 WDR38Q5JTN6 314 aa6.53□□□□□ -1.36
LSM5-210ENST00000480956 CNIH2Q6PI25 160 aa6.53□□□□□ -1.36
LSM5-210ENST00000480956 NPSR1Q6W5P4 371 aa6.53□□□□□ -1.36
LSM5-210ENST00000480956 GGNQ86UU5 652 aa6.53□□□□□ -1.36
LSM5-210ENST00000480956 THOC6Q86W42 341 aaKnown RBP6.53□□□□□ -1.36
LSM5-210ENST00000480956 HOGA1Q86XE5 327 aa6.53□□□□□ -1.36
LSM5-210ENST00000480956 RDH10Q8IZV5 341 aa6.53□□□□□ -1.36
LSM5-210ENST00000480956 C12orf29Q8N999 325 aa6.53□□□□□ -1.36
LSM5-210ENST00000480956 OR51G1Q8NGK1 321 aa6.53□□□□□ -1.36
LSM5-210ENST00000480956 TMEM230Q96A57 120 aa6.53□□□□□ -1.36
LSM5-210ENST00000480956 DDIT4LQ96D03 193 aa6.53□□□□□ -1.36
LSM5-210ENST00000480956 P2RX4Q99571 388 aa6.53□□□□□ -1.36
LSM5-210ENST00000480956 UGT1A7Q9HAW7 530 aa6.53□□□□□ -1.36
LSM5-210ENST00000480956 COMMD9Q9P000 198 aa6.53□□□□□ -1.36
LSM5-210ENST00000480956 MSH6P52701 1360 aa6.52□□□□□ -1.36
LSM5-210ENST00000480956 SLIT1O75093 1534 aa6.52□□□□□ -1.37
LSM5-210ENST00000480956 IGHV3OR16-12A0A075B7B8 117 aa6.52□□□□□ -1.37
LSM5-210ENST00000480956 SMIM9A6NGZ8 99 aa6.52□□□□□ -1.37
LSM5-210ENST00000480956 CEACAM18A8MTB9 384 aa6.52□□□□□ -1.37
LSM5-210ENST00000480956 TAAR5O14804 337 aa6.52□□□□□ -1.37
LSM5-210ENST00000480956 PROP1O75360 226 aa6.52□□□□□ -1.37
LSM5-210ENST00000480956 KLF8O95600 359 aaPredicted RBP6.52□□□□□ -1.37
LSM5-210ENST00000480956 MAKP20794 623 aa6.52□□□□□ -1.37
LSM5-210ENST00000480956 OPRL1P41146 370 aa6.52□□□□□ -1.37
LSM5-210ENST00000480956 SULT1A1P50225 295 aa6.52□□□□□ -1.37
LSM5-210ENST00000480956 SULT1A2P50226 295 aa6.52□□□□□ -1.37
LSM5-210ENST00000480956 CSRP3P50461 194 aa6.52□□□□□ -1.37
LSM5-210ENST00000480956 SKP2Q13309 424 aa6.52□□□□□ -1.37
LSM5-210ENST00000480956 C14orf28Q4W4Y0 310 aa6.52□□□□□ -1.37
LSM5-210ENST00000480956 ZNF530Q6P9A1 599 aaPredicted RBP6.52□□□□□ -1.37
LSM5-210ENST00000480956 Q6ZVH6 145 aa6.52□□□□□ -1.37
LSM5-210ENST00000480956 ZNF571Q7Z3V5 609 aaPredicted RBP6.52□□□□□ -1.37
LSM5-210ENST00000480956 P2RY8Q86VZ1 359 aa6.52□□□□□ -1.37
LSM5-210ENST00000480956 CARM1Q86X55 608 aa6.52□□□□□ -1.37
LSM5-210ENST00000480956 CBR4Q8N4T8 237 aa6.52□□□□□ -1.37
LSM5-210ENST00000480956 METTL27Q8N6F8 245 aaPredicted RBP6.52□□□□□ -1.37
LSM5-210ENST00000480956 PIFOQ8TCI5 191 aa6.52□□□□□ -1.37
LSM5-210ENST00000480956 NABP1Q96AH0 204 aa6.52□□□□□ -1.37
LSM5-210ENST00000480956 PGLYRP4Q96LB8 373 aa6.52□□□□□ -1.37
LSM5-210ENST00000480956 DDA1Q9BW61 102 aa6.52□□□□□ -1.37
LSM5-210ENST00000480956 CD84Q9UIB8 345 aa6.52□□□□□ -1.37
LSM5-210ENST00000480956 RARRES3Q9UL19 164 aa6.52□□□□□ -1.37
LSM5-210ENST00000480956 RBMY1BA6NDE4 496 aaKnown RBP6.51□□□□□ -1.37
LSM5-210ENST00000480956 RBMY1EA6NEQ0 496 aaKnown RBP6.51□□□□□ -1.37
LSM5-210ENST00000480956 CDX4O14627 284 aaPredicted RBP6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms