RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 POLR1DQ9Y2S0 133 aa5.38□□□□□ -1.55
SF3B1-209ENST00000479532 CBY1Q9Y3M2 126 aa5.38□□□□□ -1.55
SF3B1-209ENST00000479532 MAB21L2Q9Y586 359 aa5.38□□□□□ -1.55
SF3B1-209ENST00000479532 CFAP46Q8IYW2 2715 aa5.38□□□□□ -1.55
SF3B1-209ENST00000479532 CACNA1CQ13936 2221 aa5.38□□□□□ -1.55
SF3B1-209ENST00000479532 LOC100130705A0A1B0GUX0 176 aa5.37□□□□□ -1.55
SF3B1-209ENST00000479532 IQCMA0A1B0GVH7 501 aa5.37□□□□□ -1.55
SF3B1-209ENST00000479532 hCG_1807616A0A1W2PRN6 198 aa5.37□□□□□ -1.55
SF3B1-209ENST00000479532 ZNF785A8K8V0 405 aa5.37□□□□□ -1.55
SF3B1-209ENST00000479532 H7C2Y5 167 aa5.37□□□□□ -1.55
SF3B1-209ENST00000479532 RGS5O15539 181 aa5.37□□□□□ -1.55
SF3B1-209ENST00000479532 RGS10O43665 173 aa5.37□□□□□ -1.55
SF3B1-209ENST00000479532 CLDN1O95832 211 aa5.37□□□□□ -1.55
SF3B1-209ENST00000479532 RNF224P0DH78 156 aa5.37□□□□□ -1.55
SF3B1-209ENST00000479532 B4GALT1P15291 398 aa5.37□□□□□ -1.55
SF3B1-209ENST00000479532 SPNP16150 400 aa5.37□□□□□ -1.55
SF3B1-209ENST00000479532 PAX6P26367 422 aa5.37□□□□□ -1.55
SF3B1-209ENST00000479532 FMO3P31513 532 aa5.37□□□□□ -1.55
SF3B1-209ENST00000479532 ARR3P36575 388 aa5.37□□□□□ -1.55
SF3B1-209ENST00000479532 TGFBR2P37173 567 aa5.37□□□□□ -1.55
SF3B1-209ENST00000479532 RFX2P48378 723 aa5.37□□□□□ -1.55
SF3B1-209ENST00000479532 RAG2P55895 527 aa5.37□□□□□ -1.55
SF3B1-209ENST00000479532 RRAS2P62070 204 aaPredicted RBP5.37□□□□□ -1.55
SF3B1-209ENST00000479532 RPS7P62081 194 aaKnown RBP5.37□□□□□ -1.55
SF3B1-209ENST00000479532 RPS16P62249 146 aaKnown RBP5.37□□□□□ -1.55
SF3B1-209ENST00000479532 MRPS34P82930 218 aaKnown RBP5.37□□□□□ -1.55
SF3B1-209ENST00000479532 FMODQ06828 376 aa5.37□□□□□ -1.55
SF3B1-209ENST00000479532 CRMP1Q14194 572 aa5.37□□□□□ -1.55
SF3B1-209ENST00000479532 GSG1Q2KHT4 349 aa5.37□□□□□ -1.55
SF3B1-209ENST00000479532 HIKESHIQ53FT3 197 aa5.37□□□□□ -1.55
SF3B1-209ENST00000479532 SLC35D3Q5M8T2 416 aa5.37□□□□□ -1.55
SF3B1-209ENST00000479532 HACD4Q5VWC8 232 aa5.37□□□□□ -1.55
SF3B1-209ENST00000479532 TMEM236Q5W0B7 351 aa5.37□□□□□ -1.55
SF3B1-209ENST00000479532 C12orf73Q69YU5 71 aa5.37□□□□□ -1.55
SF3B1-209ENST00000479532 SP5Q6BEB4 398 aaPredicted RBP5.37□□□□□ -1.55
SF3B1-209ENST00000479532 LAMTOR1Q6IAA8 161 aa5.37□□□□□ -1.55
SF3B1-209ENST00000479532 LIN54Q6MZP7 749 aa5.37□□□□□ -1.55
SF3B1-209ENST00000479532 ACSM5Q6NUN0 579 aa5.37□□□□□ -1.55
SF3B1-209ENST00000479532 MZT2BQ6NZ67 158 aa5.37□□□□□ -1.55
SF3B1-209ENST00000479532 PTCHD4Q6ZW05 846 aa5.37□□□□□ -1.55
SF3B1-209ENST00000479532 DOK3Q7L591 496 aa5.37□□□□□ -1.55
SF3B1-209ENST00000479532 ZNF627Q7L945 461 aa5.37□□□□□ -1.55
SF3B1-209ENST00000479532 LINGO2Q7L985 606 aa5.37□□□□□ -1.55
SF3B1-209ENST00000479532 NRARPQ7Z6K4 114 aa5.37□□□□□ -1.55
SF3B1-209ENST00000479532 GID4Q8IVV7 300 aa5.37□□□□□ -1.55
SF3B1-209ENST00000479532 LRRC18Q8N456 261 aa5.37□□□□□ -1.55
SF3B1-209ENST00000479532 SLC22A24Q8N4F4 322 aa5.37□□□□□ -1.55
SF3B1-209ENST00000479532 CYB561A3Q8NBI2 242 aa5.37□□□□□ -1.55
SF3B1-209ENST00000479532 NPEPL1Q8NDH3 523 aa5.37□□□□□ -1.55
SF3B1-209ENST00000479532 OR6K6Q8NGW6 343 aa5.37□□□□□ -1.55
SF3B1-209ENST00000479532 OR2AJ1Q8NGZ0 328 aa5.37□□□□□ -1.55
SF3B1-209ENST00000479532 LINC01560Q8TB33 94 aa5.37□□□□□ -1.55
SF3B1-209ENST00000479532 RFKQ969G6 155 aa5.37□□□□□ -1.55
SF3B1-209ENST00000479532 CREB3L1Q96BA8 519 aa5.37□□□□□ -1.55
SF3B1-209ENST00000479532 BOD1Q96IK1 185 aa5.37□□□□□ -1.55
SF3B1-209ENST00000479532 Q96MT0 163 aa5.37□□□□□ -1.55
SF3B1-209ENST00000479532 OR14A2Q96R54 314 aa5.37□□□□□ -1.55
SF3B1-209ENST00000479532 MARVELD1Q9BSK0 173 aa5.37□□□□□ -1.55
SF3B1-209ENST00000479532 OR51V1Q9H2C8 321 aa5.37□□□□□ -1.55
SF3B1-209ENST00000479532 OR51M1Q9H341 326 aa5.37□□□□□ -1.55
SF3B1-209ENST00000479532 C1orf198Q9H425 327 aa5.37□□□□□ -1.55
SF3B1-209ENST00000479532 ESRP2Q9H6T0 727 aaKnown RBP5.37□□□□□ -1.55
SF3B1-209ENST00000479532 RANGRFQ9HD47 186 aaPredicted RBP5.37□□□□□ -1.55
SF3B1-209ENST00000479532 ACOT13Q9NPJ3 140 aa5.37□□□□□ -1.55
SF3B1-209ENST00000479532 POLE4Q9NR33 117 aa5.37□□□□□ -1.55
SF3B1-209ENST00000479532 RASSF1Q9NS23 344 aa5.37□□□□□ -1.55
SF3B1-209ENST00000479532 FAM118AQ9NWS6 357 aa5.37□□□□□ -1.55
SF3B1-209ENST00000479532 ZNF224Q9NZL3 707 aa5.37□□□□□ -1.55
SF3B1-209ENST00000479532 PLEKHB1Q9UF11 243 aaPredicted RBP5.37□□□□□ -1.55
SF3B1-209ENST00000479532 KCNG2Q9UJ96 466 aa5.37□□□□□ -1.55
SF3B1-209ENST00000479532 PURGQ9UJV8 347 aaKnown RBP5.37□□□□□ -1.55
SF3B1-209ENST00000479532 B9D1Q9UPM9 204 aa5.37□□□□□ -1.55
SF3B1-209ENST00000479532 PCNX1Q96RV3 2341 aa5.37□□□□□ -1.55
SF3B1-209ENST00000479532 FREM1Q5H8C1 2179 aa5.36□□□□□ -1.55
SF3B1-209ENST00000479532 OR6C68A6NDL8 312 aa5.36□□□□□ -1.55
SF3B1-209ENST00000479532 MFSD2BA6NFX1 497 aa5.36□□□□□ -1.55
SF3B1-209ENST00000479532 PCP4L1A6NKN8 68 aa5.36□□□□□ -1.55
SF3B1-209ENST00000479532 FAM183AA6NL82 134 aa5.36□□□□□ -1.55
SF3B1-209ENST00000479532 ZNF729A6NN14 1252 aaPredicted RBP5.36□□□□□ -1.55
SF3B1-209ENST00000479532 C19orf84I3L1E1 186 aa5.36□□□□□ -1.55
SF3B1-209ENST00000479532 M0R1B8 84 aa5.36□□□□□ -1.55
SF3B1-209ENST00000479532 TLX2O43763 284 aaPredicted RBP5.36□□□□□ -1.55
SF3B1-209ENST00000479532 ORC5O43913 435 aa5.36□□□□□ -1.55
SF3B1-209ENST00000479532 AIREO43918 545 aa5.36□□□□□ -1.55
SF3B1-209ENST00000479532 CRTAPO75718 401 aaPredicted RBP5.36□□□□□ -1.55
SF3B1-209ENST00000479532 GLCEO94923 617 aa5.36□□□□□ -1.55
SF3B1-209ENST00000479532 INMTO95050 263 aa5.36□□□□□ -1.55
SF3B1-209ENST00000479532 PTBP3O95758 552 aaKnown RBP5.36□□□□□ -1.55
SF3B1-209ENST00000479532 ABHD16AO95870 558 aa5.36□□□□□ -1.55
SF3B1-209ENST00000479532 DHFRP00374 187 aa5.36□□□□□ -1.55
SF3B1-209ENST00000479532 S100A9P06702 114 aaKnown RBP5.36□□□□□ -1.55
SF3B1-209ENST00000479532 FABP1P07148 127 aa5.36□□□□□ -1.55
SF3B1-209ENST00000479532 CST2P09228 141 aa5.36□□□□□ -1.55
SF3B1-209ENST00000479532 CTLA4P16410 223 aa5.36□□□□□ -1.55
SF3B1-209ENST00000479532 CRYGSP22914 178 aa5.36□□□□□ -1.55
SF3B1-209ENST00000479532 CCKARP32238 428 aa5.36□□□□□ -1.55
SF3B1-209ENST00000479532 CDAP32320 146 aa5.36□□□□□ -1.55
SF3B1-209ENST00000479532 GGT2P36268 569 aa5.36□□□□□ -1.55
SF3B1-209ENST00000479532 RPS19P39019 145 aaKnown RBP5.36□□□□□ -1.55
SF3B1-209ENST00000479532 FOXG1P55316 489 aaPredicted RBP5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms