RNA–Protein interactions for RNA: ENST00000479348.2

PCIF1-202, Transcript of PDX1 C-terminal inhibiting factor 1, humanhuman

TSL 1 (best)

Gene PCIF1, Length 1,324 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCIF1-202ENST00000479348 ERVK-18Q9QC07 812 aa11.83□□□□□ -0.52
PCIF1-202ENST00000479348 TMEM210A6NLX4 147 aa11.82□□□□□ -0.52
PCIF1-202ENST00000479348 ZNF850A8MQ14 1090 aa11.82□□□□□ -0.52
PCIF1-202ENST00000479348 CLDN25C9JDP6 229 aa11.82□□□□□ -0.52
PCIF1-202ENST00000479348 ZFPL1O95159 310 aa11.82□□□□□ -0.52
PCIF1-202ENST00000479348 NRASP01111 189 aa11.82□□□□□ -0.52
PCIF1-202ENST00000479348 FOSL1P15407 271 aa11.82□□□□□ -0.52
PCIF1-202ENST00000479348 FAHP16930 419 aa11.82□□□□□ -0.52
PCIF1-202ENST00000479348 GABARAPL2P60520 117 aa11.82□□□□□ -0.52
PCIF1-202ENST00000479348 ACSM1Q08AH1 577 aa11.82□□□□□ -0.52
PCIF1-202ENST00000479348 IRF3Q14653 427 aa11.82□□□□□ -0.52
PCIF1-202ENST00000479348 CDK5R1Q15078 307 aa11.82□□□□□ -0.52
PCIF1-202ENST00000479348 CEACAM21Q3KPI0 293 aa11.82□□□□□ -0.52
PCIF1-202ENST00000479348 SPRNQ5BIV9 151 aa11.82□□□□□ -0.52
PCIF1-202ENST00000479348 PEG10Q86TG7 708 aaKnown RBP11.82□□□□□ -0.52
PCIF1-202ENST00000479348 RDH10Q8IZV5 341 aa11.82□□□□□ -0.52
PCIF1-202ENST00000479348 OR5A2Q8NGI9 324 aa11.82□□□□□ -0.52
PCIF1-202ENST00000479348 Q8TCH9 128 aa11.82□□□□□ -0.52
PCIF1-202ENST00000479348 PP6455Q8WZ26 134 aa11.82□□□□□ -0.52
PCIF1-202ENST00000479348 HPS1Q92902 700 aa11.82□□□□□ -0.52
PCIF1-202ENST00000479348 RAB1CQ92928 201 aa11.82□□□□□ -0.52
PCIF1-202ENST00000479348 TIMD4Q96H15 378 aa11.82□□□□□ -0.52
PCIF1-202ENST00000479348 TECTBQ96PL2 329 aa11.82□□□□□ -0.52
PCIF1-202ENST00000479348 FN3KRPQ9HA64 309 aa11.82□□□□□ -0.52
PCIF1-202ENST00000479348 TMEM106BQ9NUM4 274 aa11.82□□□□□ -0.52
PCIF1-202ENST00000479348 LRRC42Q9Y546 428 aa11.82□□□□□ -0.52
PCIF1-202ENST00000479348 CSMD2Q7Z408 3487 aa11.81□□□□□ -0.52
PCIF1-202ENST00000479348 LOC100289279A0A1B0GTE1 492 aa11.81□□□□□ -0.52
PCIF1-202ENST00000479348 TRIM64A6NGJ6 449 aa11.81□□□□□ -0.52
PCIF1-202ENST00000479348 TRIM64BA6NI03 449 aa11.81□□□□□ -0.52
PCIF1-202ENST00000479348 OR5B21A6NL26 309 aa11.81□□□□□ -0.52
PCIF1-202ENST00000479348 LRRC30A6NM36 301 aa11.81□□□□□ -0.52
PCIF1-202ENST00000479348 SERPINA3P01011 423 aa11.81□□□□□ -0.52
PCIF1-202ENST00000479348 CD1AP06126 327 aa11.81□□□□□ -0.52
PCIF1-202ENST00000479348 EEF1B2P24534 225 aaKnown RBP11.81□□□□□ -0.52
PCIF1-202ENST00000479348 GPR6P46095 362 aaPredicted RBP11.81□□□□□ -0.52
PCIF1-202ENST00000479348 GTF2A1P52655 376 aaPredicted RBP11.81□□□□□ -0.52
PCIF1-202ENST00000479348 SPHARQ15513 63 aa11.81□□□□□ -0.52
PCIF1-202ENST00000479348 FAM76BQ5HYJ3 339 aa11.81□□□□□ -0.52
PCIF1-202ENST00000479348 DMKNQ6E0U4 476 aaPredicted RBP11.81□□□□□ -0.52
PCIF1-202ENST00000479348 XAF1Q6GPH4 301 aa11.81□□□□□ -0.52
PCIF1-202ENST00000479348 C1orf87Q8N0U7 546 aa11.81□□□□□ -0.52
PCIF1-202ENST00000479348 OR11L1Q8NGX0 322 aa11.81□□□□□ -0.52
PCIF1-202ENST00000479348 SMIM19Q96E16 107 aa11.81□□□□□ -0.52
PCIF1-202ENST00000479348 TMUB1Q9BVT8 246 aa11.81□□□□□ -0.52
PCIF1-202ENST00000479348 BPESC1Q9GZL8 116 aa11.81□□□□□ -0.52
PCIF1-202ENST00000479348 OTOGQ6ZRI0 2925 aa11.8□□□□□ -0.52
PCIF1-202ENST00000479348 ANKRD61A6NGH8 418 aa11.8□□□□□ -0.52
PCIF1-202ENST00000479348 PPIHO43447 177 aaKnown RBP11.8□□□□□ -0.52
PCIF1-202ENST00000479348 PLPP2O43688 288 aa11.8□□□□□ -0.52
PCIF1-202ENST00000479348 GATBO75879 557 aaKnown RBP11.8□□□□□ -0.52
PCIF1-202ENST00000479348 FSTL3O95633 263 aa11.8□□□□□ -0.52
PCIF1-202ENST00000479348 LALBAP00709 142 aa11.8□□□□□ -0.52
PCIF1-202ENST00000479348 CD99P14209 185 aa11.8□□□□□ -0.52
PCIF1-202ENST00000479348 IRF2P14316 349 aa11.8□□□□□ -0.52
PCIF1-202ENST00000479348 USF1P22415 310 aaPredicted RBP11.8□□□□□ -0.52
PCIF1-202ENST00000479348 GNG3P63215 75 aa11.8□□□□□ -0.52
PCIF1-202ENST00000479348 LOXL1Q08397 574 aaPredicted RBP11.8□□□□□ -0.52
PCIF1-202ENST00000479348 PLCXD3Q63HM9 321 aa11.8□□□□□ -0.52
PCIF1-202ENST00000479348 MOB3CQ70IA8 216 aa11.8□□□□□ -0.52
PCIF1-202ENST00000479348 UTS2BQ765I0 119 aa11.8□□□□□ -0.52
PCIF1-202ENST00000479348 MOGAT3Q86VF5 341 aa11.8□□□□□ -0.52
PCIF1-202ENST00000479348 OR1M1Q8NGA1 313 aa11.8□□□□□ -0.52
PCIF1-202ENST00000479348 OR13C3Q8NGS6 347 aa11.8□□□□□ -0.52
PCIF1-202ENST00000479348 GPR148Q8TDV2 347 aa11.8□□□□□ -0.52
PCIF1-202ENST00000479348 SGCDQ92629 289 aa11.8□□□□□ -0.52
PCIF1-202ENST00000479348 DVL3Q92997 716 aaPredicted RBP11.8□□□□□ -0.52
PCIF1-202ENST00000479348 RNF170Q96K19 258 aa11.8□□□□□ -0.52
PCIF1-202ENST00000479348 PDCD1LG2Q9BQ51 273 aa11.8□□□□□ -0.52
PCIF1-202ENST00000479348 CHST5Q9GZS9 411 aa11.8□□□□□ -0.52
PCIF1-202ENST00000479348 CCDC90BQ9GZT6 254 aa11.8□□□□□ -0.52
PCIF1-202ENST00000479348 PPP1R3EQ9H7J1 279 aa11.8□□□□□ -0.52
PCIF1-202ENST00000479348 ZNF281Q9Y2X9 895 aa11.8□□□□□ -0.52
PCIF1-202ENST00000479348 CACNG2Q9Y698 323 aa11.8□□□□□ -0.52
PCIF1-202ENST00000479348 RNF223E7ERA6 249 aa11.79□□□□□ -0.52
PCIF1-202ENST00000479348 TMEM178BH3BS89 294 aa11.79□□□□□ -0.52
PCIF1-202ENST00000479348 H7C1Q1 480 aa11.79□□□□□ -0.52
PCIF1-202ENST00000479348 MT-ND2P03891 347 aa11.79□□□□□ -0.52
PCIF1-202ENST00000479348 GRPP07492 148 aa11.79□□□□□ -0.52
PCIF1-202ENST00000479348 ZNF20P17024 532 aa11.79□□□□□ -0.52
PCIF1-202ENST00000479348 CFHR2P36980 270 aa11.79□□□□□ -0.52
PCIF1-202ENST00000479348 ZNF154Q13106 437 aa11.79□□□□□ -0.52
PCIF1-202ENST00000479348 MPPED2Q15777 294 aa11.79□□□□□ -0.52
PCIF1-202ENST00000479348 CEP78Q5JTW2 689 aa11.79□□□□□ -0.52
PCIF1-202ENST00000479348 PRAMEF6Q5VXH4 476 aa11.79□□□□□ -0.52
PCIF1-202ENST00000479348 HPSE2Q8WWQ2 592 aa11.79□□□□□ -0.52
PCIF1-202ENST00000479348 GHSRQ92847 366 aa11.79□□□□□ -0.52
PCIF1-202ENST00000479348 C18orf12Q96KH6 178 aa11.79□□□□□ -0.52
PCIF1-202ENST00000479348 COX4I2Q96KJ9 171 aa11.79□□□□□ -0.52
PCIF1-202ENST00000479348 TLNRD1Q9H1K6 362 aa11.79□□□□□ -0.52
PCIF1-202ENST00000479348 ISYNA1Q9NPH2 558 aa11.79□□□□□ -0.52
PCIF1-202ENST00000479348 UFSP2Q9NUQ7 469 aa11.79□□□□□ -0.52
PCIF1-202ENST00000479348 TREM2Q9NZC2 230 aa11.79□□□□□ -0.52
PCIF1-202ENST00000479348 RNF7Q9UBF6 113 aa11.79□□□□□ -0.52
PCIF1-202ENST00000479348 SLC7A11Q9UPY5 501 aa11.79□□□□□ -0.52
PCIF1-202ENST00000479348 LSM2Q9Y333 95 aaKnown RBP11.79□□□□□ -0.52
PCIF1-202ENST00000479348 NPTNQ9Y639 398 aa11.79□□□□□ -0.52
PCIF1-202ENST00000479348 SIRT4Q9Y6E7 314 aaPredicted RBP11.79□□□□□ -0.52
PCIF1-202ENST00000479348 ITPR3Q14573 2671 aa11.78□□□□□ -0.52
PCIF1-202ENST00000479348 A0A096LNT2 108 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms