RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 ODF4Q2M2E3 257 aa17.24■□□□□ 0.35
VARS-224ENST00000479051 FDX2Q6P4F2 183 aa17.24■□□□□ 0.35
VARS-224ENST00000479051 KCTD8Q6ZWB6 473 aa17.24■□□□□ 0.35
VARS-224ENST00000479051 LRRC28Q86X40 367 aaPredicted RBP17.24■□□□□ 0.35
VARS-224ENST00000479051 OR1M1Q8NGA1 313 aa17.24■□□□□ 0.35
VARS-224ENST00000479051 OR2G2Q8NGZ5 317 aa17.24■□□□□ 0.35
VARS-224ENST00000479051 ITPKCQ96DU7 683 aa17.24■□□□□ 0.35
VARS-224ENST00000479051 C1orf159Q96HA4 380 aa17.24■□□□□ 0.35
VARS-224ENST00000479051 JAM3Q9BX67 310 aa17.24■□□□□ 0.35
VARS-224ENST00000479051 PLEKHA1Q9HB21 404 aa17.24■□□□□ 0.35
VARS-224ENST00000479051 C1orf123Q9NWV4 160 aa17.24■□□□□ 0.35
VARS-224ENST00000479051 CHCHD3Q9NX63 227 aaKnown RBP17.24■□□□□ 0.35
VARS-224ENST00000479051 V9GYS6 101 aa17.24■□□□□ 0.35
VARS-224ENST00000479051 YLPM1P49750 1951 aaKnown RBP17.24■□□□□ 0.35
VARS-224ENST00000479051 TLN2Q9Y4G6 2542 aa17.23■□□□□ 0.35
VARS-224ENST00000479051 PPIAL4EA0A075B759 164 aa17.23■□□□□ 0.35
VARS-224ENST00000479051 A0A1B0GTI1 187 aa17.23■□□□□ 0.35
VARS-224ENST00000479051 PPIAL4DF5H284 164 aa17.23■□□□□ 0.35
VARS-224ENST00000479051 FSTL3O95633 263 aa17.23■□□□□ 0.35
VARS-224ENST00000479051 ATP6V1G2O95670 118 aa17.23■□□□□ 0.35
VARS-224ENST00000479051 IGHV2-5P01817 119 aa17.23■□□□□ 0.35
VARS-224ENST00000479051 PPIAL4FP0DN26 164 aa17.23■□□□□ 0.35
VARS-224ENST00000479051 FAHP16930 419 aa17.23■□□□□ 0.35
VARS-224ENST00000479051 CCL1P22362 96 aa17.23■□□□□ 0.35
VARS-224ENST00000479051 PMELP40967 661 aa17.23■□□□□ 0.35
VARS-224ENST00000479051 CCR9P51686 369 aa17.23■□□□□ 0.35
VARS-224ENST00000479051 ZMYND11Q15326 602 aa17.23■□□□□ 0.35
VARS-224ENST00000479051 TMEM244Q5VVB8 128 aa17.23■□□□□ 0.35
VARS-224ENST00000479051 KRT74Q7RTS7 529 aa17.23■□□□□ 0.35
VARS-224ENST00000479051 OR14K1Q8NGZ2 314 aa17.23■□□□□ 0.35
VARS-224ENST00000479051 OR5P3Q8WZ94 311 aa17.23■□□□□ 0.35
VARS-224ENST00000479051 PELI1Q96FA3 418 aa17.23■□□□□ 0.35
VARS-224ENST00000479051 RNF170Q96K19 258 aa17.23■□□□□ 0.35
VARS-224ENST00000479051 EXOSC1Q9Y3B2 195 aaKnown RBP17.23■□□□□ 0.35
VARS-224ENST00000479051 PPIAL4AQ9Y536 164 aa17.23■□□□□ 0.35
VARS-224ENST00000479051 EFCAB10A6NFE3 127 aa17.22■□□□□ 0.35
VARS-224ENST00000479051 LMX1BO60663 402 aa17.22■□□□□ 0.35
VARS-224ENST00000479051 NRASP01111 189 aa17.22■□□□□ 0.35
VARS-224ENST00000479051 RPSAP08865 295 aaKnown RBP17.22■□□□□ 0.35
VARS-224ENST00000479051 PCMT1P22061 227 aa17.22■□□□□ 0.35
VARS-224ENST00000479051 HSPA13P48723 471 aa17.22■□□□□ 0.35
VARS-224ENST00000479051 GBX2P52951 348 aaPredicted RBP17.22■□□□□ 0.35
VARS-224ENST00000479051 KCNJ8Q15842 424 aa17.22■□□□□ 0.35
VARS-224ENST00000479051 CEACAM21Q3KPI0 293 aa17.22■□□□□ 0.35
VARS-224ENST00000479051 CLVS2Q5SYC1 327 aa17.22■□□□□ 0.35
VARS-224ENST00000479051 PLCXD3Q63HM9 321 aa17.22■□□□□ 0.35
VARS-224ENST00000479051 TMPRSS11AQ6ZMR5 421 aa17.22■□□□□ 0.35
VARS-224ENST00000479051 Q6ZSR3 168 aa17.22■□□□□ 0.35
VARS-224ENST00000479051 MOB3CQ70IA8 216 aa17.22■□□□□ 0.35
VARS-224ENST00000479051 GLCCI1Q86VQ1 547 aa17.22■□□□□ 0.35
VARS-224ENST00000479051 PRSS35Q8N3Z0 413 aa17.22■□□□□ 0.35
VARS-224ENST00000479051 OR51F2Q8NH61 342 aa17.22■□□□□ 0.35
VARS-224ENST00000479051 TMEM80Q96HE8 168 aa17.22■□□□□ 0.35
VARS-224ENST00000479051 TRIM36Q9NQ86 728 aa17.22■□□□□ 0.35
VARS-224ENST00000479051 DIMT1Q9UNQ2 313 aaKnown RBP17.22■□□□□ 0.35
VARS-224ENST00000479051 LOC107986453A0A1B0GWG9 222 aa17.21■□□□□ 0.35
VARS-224ENST00000479051 OR5B21A6NL26 309 aa17.21■□□□□ 0.35
VARS-224ENST00000479051 INAFM1C9JVW0 142 aa17.21■□□□□ 0.35
VARS-224ENST00000479051 MSMBP08118 114 aa17.21■□□□□ 0.35
VARS-224ENST00000479051 CPT2P23786 658 aa17.21■□□□□ 0.35
VARS-224ENST00000479051 GNG3P63215 75 aa17.21■□□□□ 0.35
VARS-224ENST00000479051 ZNF154Q13106 437 aa17.21■□□□□ 0.35
VARS-224ENST00000479051 HNRNPA0Q13151 305 aaKnown RBP17.21■□□□□ 0.35
VARS-224ENST00000479051 ALKBH1Q13686 389 aaKnown RBP17.21■□□□□ 0.35
VARS-224ENST00000479051 CEP78Q5JTW2 689 aa17.21■□□□□ 0.35
VARS-224ENST00000479051 OR5A2Q8NGI9 324 aa17.21■□□□□ 0.35
VARS-224ENST00000479051 PPP1R3EQ9H7J1 279 aa17.21■□□□□ 0.35
VARS-224ENST00000479051 CNOT2Q9NZN8 540 aaKnown RBP17.21■□□□□ 0.35
VARS-224ENST00000479051 FRRS1LQ9P0K9 344 aa17.21■□□□□ 0.35
VARS-224ENST00000479051 CAB39Q9Y376 341 aaPredicted RBP17.21■□□□□ 0.35
VARS-224ENST00000479051 FAM157AC9JC47 383 aa17.2■□□□□ 0.34
VARS-224ENST00000479051 ZNF205O95201 554 aa17.2■□□□□ 0.34
VARS-224ENST00000479051 ISG15P05161 165 aa17.2■□□□□ 0.34
VARS-224ENST00000479051 CCDC159P0C7I6 412 aa17.2■□□□□ 0.34
VARS-224ENST00000479051 LIMS3P0CW19 117 aa17.2■□□□□ 0.34
VARS-224ENST00000479051 LIMS4P0CW20 117 aa17.2■□□□□ 0.34
VARS-224ENST00000479051 PIPP12273 146 aaPredicted RBP17.2■□□□□ 0.34
VARS-224ENST00000479051 THBS2P35442 1172 aa17.2■□□□□ 0.34
VARS-224ENST00000479051 KIR3DL2P43630 455 aa17.2■□□□□ 0.34
VARS-224ENST00000479051 DVL1P1P54792 670 aaPredicted RBP17.2■□□□□ 0.34
VARS-224ENST00000479051 RIPPLY3P57055 190 aa17.2■□□□□ 0.34
VARS-224ENST00000479051 CSNK2BP67870 215 aa17.2■□□□□ 0.34
VARS-224ENST00000479051 WDR86Q86TI4 376 aa17.2■□□□□ 0.34
VARS-224ENST00000479051 BOLLQ8N9W6 283 aaKnown RBP17.2■□□□□ 0.34
VARS-224ENST00000479051 FBLIM1Q8WUP2 373 aa17.2■□□□□ 0.34
VARS-224ENST00000479051 HPSE2Q8WWQ2 592 aa17.2■□□□□ 0.34
VARS-224ENST00000479051 C10orf35Q96D05 121 aa17.2■□□□□ 0.34
VARS-224ENST00000479051 TLNRD1Q9H1K6 362 aa17.2■□□□□ 0.34
VARS-224ENST00000479051 ISG20L2Q9H9L3 353 aaKnown RBP17.2■□□□□ 0.34
VARS-224ENST00000479051 PATZ1Q9HBE1 687 aaKnown RBP17.2■□□□□ 0.34
VARS-224ENST00000479051 PLCXD1Q9NUJ7 323 aa17.2■□□□□ 0.34
VARS-224ENST00000479051 TMEM160Q9NX00 188 aa17.2■□□□□ 0.34
VARS-224ENST00000479051 TRAV38-1A0A0B4J264 116 aa17.19■□□□□ 0.34
VARS-224ENST00000479051 TRAV20A0A0B4J274 112 aa17.19■□□□□ 0.34
VARS-224ENST00000479051 ZNF732B4DXR9 585 aa17.19■□□□□ 0.34
VARS-224ENST00000479051 LGALS8O00214 317 aa17.19■□□□□ 0.34
VARS-224ENST00000479051 GATBO75879 557 aaKnown RBP17.19■□□□□ 0.34
VARS-224ENST00000479051 SERPINA3P01011 423 aa17.19■□□□□ 0.34
VARS-224ENST00000479051 RBMXP38159 391 aaKnown RBP17.19■□□□□ 0.34
VARS-224ENST00000479051 GPM6AP51674 278 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms