RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 WDR38Q5JTN6 314 aa12.26□□□□□ -0.45
USP11-207ENST00000478596 GLYATL3Q5SZD4 288 aa12.26□□□□□ -0.45
USP11-207ENST00000478596 ZNF684Q5T5D7 378 aa12.26□□□□□ -0.45
USP11-207ENST00000478596 RBMS3Q6XE24 437 aaKnown RBP12.26□□□□□ -0.45
USP11-207ENST00000478596 PGAP1Q75T13 922 aa12.26□□□□□ -0.45
USP11-207ENST00000478596 NAA40Q86UY6 237 aa12.26□□□□□ -0.45
USP11-207ENST00000478596 C1orf174Q8IYL3 243 aa12.26□□□□□ -0.45
USP11-207ENST00000478596 ZCCHC24Q8N2G6 241 aaKnown RBP12.26□□□□□ -0.45
USP11-207ENST00000478596 NUP37Q8NFH4 326 aa12.26□□□□□ -0.45
USP11-207ENST00000478596 OR2G2Q8NGZ5 317 aa12.26□□□□□ -0.45
USP11-207ENST00000478596 SLC25A40Q8TBP6 338 aa12.26□□□□□ -0.45
USP11-207ENST00000478596 TSEN15Q8WW01 171 aaKnown RBP12.26□□□□□ -0.45
USP11-207ENST00000478596 RORBQ92753 470 aa12.26□□□□□ -0.45
USP11-207ENST00000478596 UFD1Q92890 307 aa12.26□□□□□ -0.45
USP11-207ENST00000478596 REEP6Q96HR9 211 aa12.26□□□□□ -0.45
USP11-207ENST00000478596 FAM71F1Q96KD3 344 aaPredicted RBP12.26□□□□□ -0.45
USP11-207ENST00000478596 SIGLEC11Q96RL6 698 aa12.26□□□□□ -0.45
USP11-207ENST00000478596 SYT3Q9BQG1 590 aa12.26□□□□□ -0.45
USP11-207ENST00000478596 OR2J1Q9GZK6 312 aa12.26□□□□□ -0.45
USP11-207ENST00000478596 OPA3Q9H6K4 179 aa12.26□□□□□ -0.45
USP11-207ENST00000478596 BABAM2Q9NXR7 383 aa12.26□□□□□ -0.45
USP11-207ENST00000478596 NUFIP1Q9UHK0 495 aaKnown RBP12.26□□□□□ -0.45
USP11-207ENST00000478596 DUSP13Q9UII6 198 aa12.26□□□□□ -0.45
USP11-207ENST00000478596 SLC22A13Q9Y226 551 aa12.26□□□□□ -0.45
USP11-207ENST00000478596 STARD10Q9Y365 291 aa12.26□□□□□ -0.45
USP11-207ENST00000478596 TENM3Q9P273 2699 aa12.25□□□□□ -0.45
USP11-207ENST00000478596 A0A0G2JMP0 313 aa12.25□□□□□ -0.45
USP11-207ENST00000478596 A0A0X1KG70 313 aa12.25□□□□□ -0.45
USP11-207ENST00000478596 LOC107986453A0A1B0GWG9 222 aa12.25□□□□□ -0.45
USP11-207ENST00000478596 MAGEA13PA6NCF6 341 aa12.25□□□□□ -0.45
USP11-207ENST00000478596 ACOD1A6NK06 481 aa12.25□□□□□ -0.45
USP11-207ENST00000478596 LYNX1G3V0Z9 82 aa12.25□□□□□ -0.45
USP11-207ENST00000478596 J3QLI3 93 aa12.25□□□□□ -0.45
USP11-207ENST00000478596 M0QZ24 198 aa12.25□□□□□ -0.45
USP11-207ENST00000478596 P2RY10O00398 339 aa12.25□□□□□ -0.45
USP11-207ENST00000478596 FSHBP01225 129 aa12.25□□□□□ -0.45
USP11-207ENST00000478596 LYNX1P0DP58 116 aa12.25□□□□□ -0.45
USP11-207ENST00000478596 THBS4P35443 961 aa12.25□□□□□ -0.45
USP11-207ENST00000478596 GTF2A1P52655 376 aaPredicted RBP12.25□□□□□ -0.45
USP11-207ENST00000478596 ALKBH1Q13686 389 aaKnown RBP12.25□□□□□ -0.45
USP11-207ENST00000478596 NKPD1Q17RQ9 610 aa12.25□□□□□ -0.45
USP11-207ENST00000478596 KRTAP27-1Q3LI81 207 aa12.25□□□□□ -0.45
USP11-207ENST00000478596 RNLSQ5VYX0 342 aa12.25□□□□□ -0.45
USP11-207ENST00000478596 DOK3Q7L591 496 aa12.25□□□□□ -0.45
USP11-207ENST00000478596 CATSPERDQ86XM0 798 aa12.25□□□□□ -0.45
USP11-207ENST00000478596 C1QL4Q86Z23 238 aa12.25□□□□□ -0.45
USP11-207ENST00000478596 SPARTQ8N0X7 666 aa12.25□□□□□ -0.45
USP11-207ENST00000478596 BHLHE23Q8NDY6 225 aa12.25□□□□□ -0.45
USP11-207ENST00000478596 OR4M2Q8NGB6 313 aa12.25□□□□□ -0.45
USP11-207ENST00000478596 OR5AK2Q8NH90 309 aa12.25□□□□□ -0.45
USP11-207ENST00000478596 OR51E1Q8TCB6 317 aa12.25□□□□□ -0.45
USP11-207ENST00000478596 DVL3Q92997 716 aaPredicted RBP12.25□□□□□ -0.45
USP11-207ENST00000478596 OR5M11Q96RB7 305 aa12.25□□□□□ -0.45
USP11-207ENST00000478596 POFUT1Q9H488 388 aa12.25□□□□□ -0.45
USP11-207ENST00000478596 RGCCQ9H4X1 137 aa12.25□□□□□ -0.45
USP11-207ENST00000478596 DYNLRB1Q9NP97 96 aa12.25□□□□□ -0.45
USP11-207ENST00000478596 ACOT13Q9NPJ3 140 aa12.25□□□□□ -0.45
USP11-207ENST00000478596 TREM2Q9NZC2 230 aa12.25□□□□□ -0.45
USP11-207ENST00000478596 MMP24Q9Y5R2 645 aa12.25□□□□□ -0.45
USP11-207ENST00000478596 DNAJC9-AS1A6NH13 148 aa12.24□□□□□ -0.45
USP11-207ENST00000478596 TMEM212A6NML5 194 aa12.24□□□□□ -0.45
USP11-207ENST00000478596 E9PI62 339 aa12.24□□□□□ -0.45
USP11-207ENST00000478596 RNASE1P07998 156 aaKnown RBP12.24□□□□□ -0.45
USP11-207ENST00000478596 SELEP16581 610 aa12.24□□□□□ -0.45
USP11-207ENST00000478596 ADRA2CP18825 462 aa12.24□□□□□ -0.45
USP11-207ENST00000478596 GLRXP35754 106 aa12.24□□□□□ -0.45
USP11-207ENST00000478596 GPR6P46095 362 aaPredicted RBP12.24□□□□□ -0.45
USP11-207ENST00000478596 TGM4P49221 684 aa12.24□□□□□ -0.45
USP11-207ENST00000478596 PRSS12P56730 875 aa12.24□□□□□ -0.45
USP11-207ENST00000478596 LMO4P61968 165 aa12.24□□□□□ -0.45
USP11-207ENST00000478596 IRF3Q14653 427 aa12.24□□□□□ -0.45
USP11-207ENST00000478596 HLXQ14774 488 aaPredicted RBP12.24□□□□□ -0.45
USP11-207ENST00000478596 CDK5R1Q15078 307 aa12.24□□□□□ -0.45
USP11-207ENST00000478596 RSPO1Q2MKA7 263 aaPredicted RBP12.24□□□□□ -0.45
USP11-207ENST00000478596 CCDC58Q4VC31 144 aa12.24□□□□□ -0.45
USP11-207ENST00000478596 RPL22L1Q6P5R6 122 aaKnown RBP12.24□□□□□ -0.45
USP11-207ENST00000478596 KCTD8Q6ZWB6 473 aa12.24□□□□□ -0.45
USP11-207ENST00000478596 OR5AS1Q8N127 324 aa12.24□□□□□ -0.45
USP11-207ENST00000478596 SIGLECL1Q8N7X8 197 aa12.24□□□□□ -0.45
USP11-207ENST00000478596 SYNPRQ8TBG9 265 aa12.24□□□□□ -0.45
USP11-207ENST00000478596 C22orf15Q8WYQ4 148 aa12.24□□□□□ -0.45
USP11-207ENST00000478596 SMIM19Q96E16 107 aa12.24□□□□□ -0.45
USP11-207ENST00000478596 ZNF649Q9BS31 505 aa12.24□□□□□ -0.45
USP11-207ENST00000478596 MRPS26Q9BYN8 205 aaKnown RBP12.24□□□□□ -0.45
USP11-207ENST00000478596 ZNF442Q9H7R0 627 aa12.24□□□□□ -0.45
USP11-207ENST00000478596 GPR84Q9NQS5 396 aa12.24□□□□□ -0.45
USP11-207ENST00000478596 ZNF391Q9UJN7 358 aa12.24□□□□□ -0.45
USP11-207ENST00000478596 PLSCR5A0PG75 271 aa12.23□□□□□ -0.45
USP11-207ENST00000478596 H3BSA7 217 aa12.23□□□□□ -0.45
USP11-207ENST00000478596 PIN1P1O15428 100 aa12.23□□□□□ -0.45
USP11-207ENST00000478596 SYT7O43581 403 aa12.23□□□□□ -0.45
USP11-207ENST00000478596 ICMTO60725 284 aa12.23□□□□□ -0.45
USP11-207ENST00000478596 MTRF1O75570 445 aaKnown RBP12.23□□□□□ -0.45
USP11-207ENST00000478596 TTRP02766 147 aa12.23□□□□□ -0.45
USP11-207ENST00000478596 ZNF20P17024 532 aa12.23□□□□□ -0.45
USP11-207ENST00000478596 CELP19835 753 aa12.23□□□□□ -0.45
USP11-207ENST00000478596 MDKP21741 143 aaPredicted RBP12.23□□□□□ -0.45
USP11-207ENST00000478596 GNALP38405 381 aa12.23□□□□□ -0.45
USP11-207ENST00000478596 MPV17P39210 176 aa12.23□□□□□ -0.45
USP11-207ENST00000478596 KIR3DL2P43630 455 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms