RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 IFNL4K9M1U5 179 aa22.62■■□□□ 1.21
CCM2-211ENST00000478582 SYT7O43581 403 aa22.62■■□□□ 1.21
CCM2-211ENST00000478582 SLC3A1Q07837 685 aa22.62■■□□□ 1.21
CCM2-211ENST00000478582 PRDX4Q13162 271 aa22.62■■□□□ 1.21
CCM2-211ENST00000478582 ODF4Q2M2E3 257 aa22.62■■□□□ 1.21
CCM2-211ENST00000478582 CCL17Q92583 94 aa22.62■■□□□ 1.21
CCM2-211ENST00000478582 BPESC1Q9GZL8 116 aa22.62■■□□□ 1.21
CCM2-211ENST00000478582 C14orf119Q9NWQ9 140 aa22.62■■□□□ 1.21
CCM2-211ENST00000478582 ENPP5Q9UJA9 477 aa22.62■■□□□ 1.21
CCM2-211ENST00000478582 PIGLQ9Y2B2 252 aa22.62■■□□□ 1.21
CCM2-211ENST00000478582 PCDHGB5Q9Y5G0 923 aa22.62■■□□□ 1.21
CCM2-211ENST00000478582 NAV3Q8IVL0 2385 aa22.61■■□□□ 1.21
CCM2-211ENST00000478582 LOC107986453A0A1B0GWG9 222 aa22.61■■□□□ 1.21
CCM2-211ENST00000478582 ZNF850A8MQ14 1090 aa22.61■■□□□ 1.21
CCM2-211ENST00000478582 RPSAP08865 295 aaKnown RBP22.61■■□□□ 1.21
CCM2-211ENST00000478582 ZNF12P17014 697 aa22.61■■□□□ 1.21
CCM2-211ENST00000478582 CRHBPP24387 322 aa22.61■■□□□ 1.21
CCM2-211ENST00000478582 LOXL1Q08397 574 aaPredicted RBP22.61■■□□□ 1.21
CCM2-211ENST00000478582 ZNF181Q2M3W8 571 aa22.61■■□□□ 1.21
CCM2-211ENST00000478582 RBM48Q5RL73 367 aaKnown RBP22.61■■□□□ 1.21
CCM2-211ENST00000478582 OR8S1Q8NH09 359 aa22.61■■□□□ 1.21
CCM2-211ENST00000478582 PIGCQ92535 297 aa22.61■■□□□ 1.21
CCM2-211ENST00000478582 DVL3Q92997 716 aaPredicted RBP22.61■■□□□ 1.21
CCM2-211ENST00000478582 ITPKCQ96DU7 683 aa22.61■■□□□ 1.21
CCM2-211ENST00000478582 CDCA4Q9BXL8 241 aa22.61■■□□□ 1.21
CCM2-211ENST00000478582 PPP1R3EQ9H7J1 279 aa22.61■■□□□ 1.21
CCM2-211ENST00000478582 TMEM106BQ9NUM4 274 aa22.61■■□□□ 1.21
CCM2-211ENST00000478582 PAK1IP1Q9NWT1 392 aaPredicted RBP22.61■■□□□ 1.21
CCM2-211ENST00000478582 ABCA1O95477 2261 aa22.61■■□□□ 1.21
CCM2-211ENST00000478582 LOC100289279A0A1B0GTE1 492 aa22.6■■□□□ 1.21
CCM2-211ENST00000478582 ANXA2P2A6NMY6 339 aa22.6■■□□□ 1.21
CCM2-211ENST00000478582 INAFM1C9JVW0 142 aa22.6■■□□□ 1.21
CCM2-211ENST00000478582 FAHP16930 419 aa22.6■■□□□ 1.21
CCM2-211ENST00000478582 GPR6P46095 362 aaPredicted RBP22.6■■□□□ 1.21
CCM2-211ENST00000478582 TMEM42Q69YG0 159 aa22.6■■□□□ 1.21
CCM2-211ENST00000478582 RPL22L1Q6P5R6 122 aaKnown RBP22.6■■□□□ 1.21
CCM2-211ENST00000478582 RDH10Q8IZV5 341 aa22.6■■□□□ 1.21
CCM2-211ENST00000478582 NANOGP1Q8N7R0 232 aa22.6■■□□□ 1.21
CCM2-211ENST00000478582 Q8TCH9 128 aa22.6■■□□□ 1.21
CCM2-211ENST00000478582 RPS4Y2Q8TD47 263 aa22.6■■□□□ 1.21
CCM2-211ENST00000478582 OR5P3Q8WZ94 311 aa22.6■■□□□ 1.21
CCM2-211ENST00000478582 C10orf35Q96D05 121 aa22.6■■□□□ 1.21
CCM2-211ENST00000478582 TREM2Q9NZC2 230 aa22.6■■□□□ 1.21
CCM2-211ENST00000478582 TMEM212A6NML5 194 aa22.59■■□□□ 1.21
CCM2-211ENST00000478582 CLDN25C9JDP6 229 aa22.59■■□□□ 1.21
CCM2-211ENST00000478582 GTF2A1P52655 376 aaPredicted RBP22.59■■□□□ 1.21
CCM2-211ENST00000478582 ZDHHC23Q8IYP9 409 aa22.59■■□□□ 1.21
CCM2-211ENST00000478582 GATAD2BQ8WXI9 593 aa22.59■■□□□ 1.21
CCM2-211ENST00000478582 MICU1Q9BPX6 476 aa22.59■■□□□ 1.21
CCM2-211ENST00000478582 UBAP1Q9NZ09 502 aa22.59■■□□□ 1.21
CCM2-211ENST00000478582 ERGIC3Q9Y282 383 aa22.59■■□□□ 1.21
CCM2-211ENST00000478582 TANC2Q9HCD6 1990 aa22.58■■□□□ 1.21
CCM2-211ENST00000478582 OGG1O15527 345 aa22.58■■□□□ 1.21
CCM2-211ENST00000478582 PPIHO43447 177 aaKnown RBP22.58■■□□□ 1.21
CCM2-211ENST00000478582 CD5LO43866 347 aa22.58■■□□□ 1.21
CCM2-211ENST00000478582 USF1P22415 310 aaPredicted RBP22.58■■□□□ 1.21
CCM2-211ENST00000478582 PMELP40967 661 aa22.58■■□□□ 1.21
CCM2-211ENST00000478582 CDH15P55291 814 aa22.58■■□□□ 1.21
CCM2-211ENST00000478582 CDK5R1Q15078 307 aa22.58■■□□□ 1.21
CCM2-211ENST00000478582 CLVS2Q5SYC1 327 aa22.58■■□□□ 1.21
CCM2-211ENST00000478582 MOGAT3Q86VF5 341 aa22.58■■□□□ 1.21
CCM2-211ENST00000478582 ZNF676Q8N7Q3 588 aa22.58■■□□□ 1.21
CCM2-211ENST00000478582 HHLA2Q9UM44 414 aa22.58■■□□□ 1.21
CCM2-211ENST00000478582 YLPM1P49750 1951 aaKnown RBP22.58■■□□□ 1.2
CCM2-211ENST00000478582 TRBV2A0A0J9YWF9 115 aa22.57■■□□□ 1.2
CCM2-211ENST00000478582 ZFPL1O95159 310 aa22.57■■□□□ 1.2
CCM2-211ENST00000478582 NRASP01111 189 aa22.57■■□□□ 1.2
CCM2-211ENST00000478582 WNT4P56705 351 aa22.57■■□□□ 1.2
CCM2-211ENST00000478582 IRF3Q14653 427 aa22.57■■□□□ 1.2
CCM2-211ENST00000478582 MPPED2Q15777 294 aa22.57■■□□□ 1.2
CCM2-211ENST00000478582 CEACAM21Q3KPI0 293 aa22.57■■□□□ 1.2
CCM2-211ENST00000478582 FAM76BQ5HYJ3 339 aa22.57■■□□□ 1.2
CCM2-211ENST00000478582 PRAMEF6Q5VXH4 476 aa22.57■■□□□ 1.2
CCM2-211ENST00000478582 XAF1Q6GPH4 301 aa22.57■■□□□ 1.2
CCM2-211ENST00000478582 OR5AK2Q8NH90 309 aa22.57■■□□□ 1.2
CCM2-211ENST00000478582 HPSE2Q8WWQ2 592 aa22.57■■□□□ 1.2
CCM2-211ENST00000478582 SGCDQ92629 289 aa22.57■■□□□ 1.2
CCM2-211ENST00000478582 RAB1CQ92928 201 aa22.57■■□□□ 1.2
CCM2-211ENST00000478582 TIMD4Q96H15 378 aa22.57■■□□□ 1.2
CCM2-211ENST00000478582 HIST1H2AAQ96QV6 131 aa22.57■■□□□ 1.2
CCM2-211ENST00000478582 RTL8AQ9BWD3 113 aa22.57■■□□□ 1.2
CCM2-211ENST00000478582 COMMD4Q9H0A8 199 aa22.57■■□□□ 1.2
CCM2-211ENST00000478582 FN3KRPQ9HA64 309 aa22.57■■□□□ 1.2
CCM2-211ENST00000478582 TRIM36Q9NQ86 728 aa22.57■■□□□ 1.2
CCM2-211ENST00000478582 ERVK-18Q9QC07 812 aa22.57■■□□□ 1.2
CCM2-211ENST00000478582 BLOC1S6Q9UL45 172 aa22.57■■□□□ 1.2
CCM2-211ENST00000478582 IGHV3-64DA0A0J9YX35 117 aa22.56■■□□□ 1.2
CCM2-211ENST00000478582 TMEM178BH3BS89 294 aa22.56■■□□□ 1.2
CCM2-211ENST00000478582 MYL12BO14950 172 aa22.56■■□□□ 1.2
CCM2-211ENST00000478582 LALBAP00709 142 aa22.56■■□□□ 1.2
CCM2-211ENST00000478582 TMEM249Q2WGJ8 235 aa22.56■■□□□ 1.2
CCM2-211ENST00000478582 WDR86Q86TI4 376 aa22.56■■□□□ 1.2
CCM2-211ENST00000478582 OR1M1Q8NGA1 313 aa22.56■■□□□ 1.2
CCM2-211ENST00000478582 OR5A2Q8NGI9 324 aa22.56■■□□□ 1.2
CCM2-211ENST00000478582 ZNF420Q8TAQ5 688 aaPredicted RBP22.56■■□□□ 1.2
CCM2-211ENST00000478582 FGF23Q9GZV9 251 aaPredicted RBP22.56■■□□□ 1.2
CCM2-211ENST00000478582 PLEKHA1Q9HB21 404 aa22.56■■□□□ 1.2
CCM2-211ENST00000478582 DCAF16Q9NXF7 216 aa22.56■■□□□ 1.2
CCM2-211ENST00000478582 WIPI2Q9Y4P8 454 aa22.56■■□□□ 1.2
CCM2-211ENST00000478582 IGHV4-61A0A0C4DH41 118 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms