RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 HEXA-AS1Q9H8Q6 139 aa16.33■□□□□ 0.2
PDLIM1-202ENST00000477757 hCG_38984A0A1B0GV85 526 aa16.32■□□□□ 0.2
PDLIM1-202ENST00000477757 GLCEO94923 617 aa16.32■□□□□ 0.2
PDLIM1-202ENST00000477757 ALDOBP05062 364 aa16.32■□□□□ 0.2
PDLIM1-202ENST00000477757 GNALP38405 381 aa16.32■□□□□ 0.2
PDLIM1-202ENST00000477757 VDAC2P45880 294 aaPredicted RBP16.32■□□□□ 0.2
PDLIM1-202ENST00000477757 DCTN2Q13561 401 aaKnown RBP16.32■□□□□ 0.2
PDLIM1-202ENST00000477757 SEC23BQ15437 767 aa16.32■□□□□ 0.2
PDLIM1-202ENST00000477757 TMEM95Q3KNT9 176 aa16.32■□□□□ 0.2
PDLIM1-202ENST00000477757 DCXRQ7Z4W1 244 aa16.32■□□□□ 0.2
PDLIM1-202ENST00000477757 MICU1Q9BPX6 476 aa16.32■□□□□ 0.2
PDLIM1-202ENST00000477757 PAPOLGQ9BWT3 736 aaKnown RBP16.32■□□□□ 0.2
PDLIM1-202ENST00000477757 OR52D1Q9H346 318 aa16.32■□□□□ 0.2
PDLIM1-202ENST00000477757 N6AMT1Q9Y5N5 214 aa16.32■□□□□ 0.2
PDLIM1-202ENST00000477757 SACSQ9NZJ4 4579 aa16.32■□□□□ 0.2
PDLIM1-202ENST00000477757 TRBV4-1A0A0J9YWV2 114 aa16.31■□□□□ 0.2
PDLIM1-202ENST00000477757 FAM90A8PA6NJQ4 464 aa16.31■□□□□ 0.2
PDLIM1-202ENST00000477757 OR2AT4A6NND4 320 aa16.31■□□□□ 0.2
PDLIM1-202ENST00000477757 HOXD3P31249 432 aaPredicted RBP16.31■□□□□ 0.2
PDLIM1-202ENST00000477757 LGALS4P56470 323 aa16.31■□□□□ 0.2
PDLIM1-202ENST00000477757 IL5RAQ01344 420 aa16.31■□□□□ 0.2
PDLIM1-202ENST00000477757 TIGD6Q17RP2 521 aa16.31■□□□□ 0.2
PDLIM1-202ENST00000477757 AGBL2Q5U5Z8 902 aa16.31■□□□□ 0.2
PDLIM1-202ENST00000477757 RPS4Y2Q8TD47 263 aa16.31■□□□□ 0.2
PDLIM1-202ENST00000477757 RPL3LQ92901 407 aaKnown RBP16.31■□□□□ 0.2
PDLIM1-202ENST00000477757 IFT27Q9BW83 186 aa16.31■□□□□ 0.2
PDLIM1-202ENST00000477757 RTL8AQ9BWD3 113 aa16.31■□□□□ 0.2
PDLIM1-202ENST00000477757 MUC13Q9H3R2 512 aa16.31■□□□□ 0.2
PDLIM1-202ENST00000477757 C19orf12Q9NSK7 152 aa16.31■□□□□ 0.2
PDLIM1-202ENST00000477757 GMPR2Q9P2T1 348 aaKnown RBP16.31■□□□□ 0.2
PDLIM1-202ENST00000477757 NLKQ9UBE8 527 aa16.31■□□□□ 0.2
PDLIM1-202ENST00000477757 ZNF222Q9UK12 451 aa16.31■□□□□ 0.2
PDLIM1-202ENST00000477757 PITPNC1Q9UKF7 332 aa16.31■□□□□ 0.2
PDLIM1-202ENST00000477757 RHBDD3Q9Y3P4 386 aa16.31■□□□□ 0.2
PDLIM1-202ENST00000477757 LRP12Q9Y561 859 aa16.31■□□□□ 0.2
PDLIM1-202ENST00000477757 COMMD3-BMI1R4GMX3 469 aa16.31■□□□□ 0.2
PDLIM1-202ENST00000477757 IGKV1D-17A0A075B6S4 117 aa16.3■□□□□ 0.2
PDLIM1-202ENST00000477757 TMEM210A6NLX4 147 aa16.3■□□□□ 0.2
PDLIM1-202ENST00000477757 ANXA2P2A6NMY6 339 aa16.3■□□□□ 0.2
PDLIM1-202ENST00000477757 TBX1O43435 398 aa16.3■□□□□ 0.2
PDLIM1-202ENST00000477757 AKR7A2O43488 359 aa16.3■□□□□ 0.2
PDLIM1-202ENST00000477757 COX7A1P24310 79 aa16.3■□□□□ 0.2
PDLIM1-202ENST00000477757 KLHL12Q53G59 568 aa16.3■□□□□ 0.2
PDLIM1-202ENST00000477757 PLA1AQ53H76 456 aa16.3■□□□□ 0.2
PDLIM1-202ENST00000477757 ARSJQ5FYB0 599 aaPredicted RBP16.3■□□□□ 0.2
PDLIM1-202ENST00000477757 Q6ZS46 218 aa16.3■□□□□ 0.2
PDLIM1-202ENST00000477757 LHFPL4Q7Z7J7 247 aa16.3■□□□□ 0.2
PDLIM1-202ENST00000477757 DYNAPQ8N1N2 210 aa16.3■□□□□ 0.2
PDLIM1-202ENST00000477757 ZNRF1Q8ND25 227 aa16.3■□□□□ 0.2
PDLIM1-202ENST00000477757 TMEM185AQ8NFB2 350 aa16.3■□□□□ 0.2
PDLIM1-202ENST00000477757 OR5AU1Q8NGC0 362 aa16.3■□□□□ 0.2
PDLIM1-202ENST00000477757 DYDC1Q8WWB3 177 aa16.3■□□□□ 0.2
PDLIM1-202ENST00000477757 SLAMF6Q96DU3 332 aa16.3■□□□□ 0.2
PDLIM1-202ENST00000477757 REEP6Q96HR9 211 aa16.3■□□□□ 0.2
PDLIM1-202ENST00000477757 INPP5EQ9NRR6 644 aa16.3■□□□□ 0.2
PDLIM1-202ENST00000477757 GID8Q9NWU2 228 aa16.3■□□□□ 0.2
PDLIM1-202ENST00000477757 TVP23AA6NH52 213 aa16.29■□□□□ 0.2
PDLIM1-202ENST00000477757 ZNF878C9JN71 531 aa16.29■□□□□ 0.2
PDLIM1-202ENST00000477757 CXCR6O00574 342 aa16.29■□□□□ 0.2
PDLIM1-202ENST00000477757 SYNGR1O43759 233 aa16.29■□□□□ 0.2
PDLIM1-202ENST00000477757 IDH3BO43837 385 aa16.29■□□□□ 0.2
PDLIM1-202ENST00000477757 PYCR1P32322 319 aa16.29■□□□□ 0.2
PDLIM1-202ENST00000477757 RAB13P51153 203 aa16.29■□□□□ 0.2
PDLIM1-202ENST00000477757 TAF13Q15543 124 aa16.29■□□□□ 0.2
PDLIM1-202ENST00000477757 TCTEX1D4Q5JR98 221 aa16.29■□□□□ 0.2
PDLIM1-202ENST00000477757 LYPD4Q6UWN0 246 aa16.29■□□□□ 0.2
PDLIM1-202ENST00000477757 CPLX4Q7Z7G2 160 aa16.29■□□□□ 0.2
PDLIM1-202ENST00000477757 FTMTQ8N4E7 242 aa16.29■□□□□ 0.2
PDLIM1-202ENST00000477757 C11orf42Q8N5U0 333 aa16.29■□□□□ 0.2
PDLIM1-202ENST00000477757 CSNK2A3Q8NEV1 391 aa16.29■□□□□ 0.2
PDLIM1-202ENST00000477757 PROKR2Q8NFJ6 384 aa16.29■□□□□ 0.2
PDLIM1-202ENST00000477757 SGK3Q96BR1 496 aa16.29■□□□□ 0.2
PDLIM1-202ENST00000477757 FOXRED1Q96CU9 486 aaPredicted RBP16.29■□□□□ 0.2
PDLIM1-202ENST00000477757 SIKE1Q9BRV8 207 aa16.29■□□□□ 0.2
PDLIM1-202ENST00000477757 FUZQ9BT04 418 aa16.29■□□□□ 0.2
PDLIM1-202ENST00000477757 GPR61Q9BZJ8 451 aa16.29■□□□□ 0.2
PDLIM1-202ENST00000477757 ABCB10Q9NRK6 738 aa16.29■□□□□ 0.2
PDLIM1-202ENST00000477757 U3KQK5 164 aa16.29■□□□□ 0.2
PDLIM1-202ENST00000477757 A0A0G2JND7 137 aa16.28■□□□□ 0.2
PDLIM1-202ENST00000477757 C3orf84H3BNL1 204 aa16.28■□□□□ 0.2
PDLIM1-202ENST00000477757 SERPINA1P01009 418 aa16.28■□□□□ 0.2
PDLIM1-202ENST00000477757 CFL1P23528 166 aaKnown RBP16.28■□□□□ 0.2
PDLIM1-202ENST00000477757 GABRA2P47869 451 aa16.28■□□□□ 0.2
PDLIM1-202ENST00000477757 CX3CR1P49238 355 aa16.28■□□□□ 0.2
PDLIM1-202ENST00000477757 GSK3AP49840 483 aa16.28■□□□□ 0.2
PDLIM1-202ENST00000477757 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.28■□□□□ 0.2
PDLIM1-202ENST00000477757 SNCBQ16143 134 aa16.28■□□□□ 0.2
PDLIM1-202ENST00000477757 CCDC121Q6ZUS5 278 aa16.28■□□□□ 0.2
PDLIM1-202ENST00000477757 DPF1Q92782 380 aa16.28■□□□□ 0.2
PDLIM1-202ENST00000477757 DHRS1Q96LJ7 313 aa16.28■□□□□ 0.2
PDLIM1-202ENST00000477757 CENPMQ9NSP4 180 aa16.28■□□□□ 0.2
PDLIM1-202ENST00000477757 MRGBPQ9NV56 204 aa16.28■□□□□ 0.2
PDLIM1-202ENST00000477757 CMTM6Q9NX76 183 aa16.28■□□□□ 0.2
PDLIM1-202ENST00000477757 NDUFAF4Q9P032 175 aa16.28■□□□□ 0.2
PDLIM1-202ENST00000477757 TSSC4Q9Y5U2 329 aaPredicted RBP16.28■□□□□ 0.2
PDLIM1-202ENST00000477757 MPC1Q9Y5U8 109 aa16.28■□□□□ 0.2
PDLIM1-202ENST00000477757 TENM2Q9NT68 2774 aa16.28■□□□□ 0.2
PDLIM1-202ENST00000477757 A0A1W2PPH5 198 aa16.27■□□□□ 0.2
PDLIM1-202ENST00000477757 ANXA2P07355 339 aaKnown RBP16.27■□□□□ 0.2
PDLIM1-202ENST00000477757 SPARCP09486 303 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms