RNA–Protein interactions for RNA: ENST00000477583.1

CACUL1-202, Transcript of CDK2 associated cullin domain 1, humanhuman

TSL 1 (best)

Gene CACUL1, Length 432 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACUL1-202ENST00000477583 MDP1Q86V88 176 aa1.28□□□□□ -2.2
CACUL1-202ENST00000477583 VKORC1L1Q8N0U8 176 aa1.28□□□□□ -2.2
CACUL1-202ENST00000477583 SLC35G3Q8N808 338 aa1.28□□□□□ -2.2
CACUL1-202ENST00000477583 LINC00304Q8N9R0 145 aa1.28□□□□□ -2.2
CACUL1-202ENST00000477583 UBAC2Q8NBM4 344 aa1.28□□□□□ -2.2
CACUL1-202ENST00000477583 APCDD1LQ8NCL9 501 aa1.28□□□□□ -2.2
CACUL1-202ENST00000477583 BPIFCQ8NFQ6 507 aa1.28□□□□□ -2.2
CACUL1-202ENST00000477583 RXFP4Q8TDU9 374 aa1.28□□□□□ -2.2
CACUL1-202ENST00000477583 RAB1CQ92928 201 aa1.28□□□□□ -2.2
CACUL1-202ENST00000477583 CPNE4Q96A23 557 aaPredicted RBP1.28□□□□□ -2.2
CACUL1-202ENST00000477583 WDR34Q96EX3 536 aa1.28□□□□□ -2.2
CACUL1-202ENST00000477583 KCNS1Q96KK3 526 aa1.28□□□□□ -2.2
CACUL1-202ENST00000477583 IP6K3Q96PC2 410 aa1.28□□□□□ -2.2
CACUL1-202ENST00000477583 CHCHD7Q9BUK0 85 aa1.28□□□□□ -2.2
CACUL1-202ENST00000477583 CALN1Q9BXU9 219 aa1.28□□□□□ -2.2
CACUL1-202ENST00000477583 TOLLIPQ9H0E2 274 aa1.28□□□□□ -2.2
CACUL1-202ENST00000477583 ZSCAN16Q9H4T2 348 aaPredicted RBP1.28□□□□□ -2.2
CACUL1-202ENST00000477583 EXO5Q9H790 373 aa1.28□□□□□ -2.2
CACUL1-202ENST00000477583 AUNIPQ9H7T9 357 aa1.28□□□□□ -2.2
CACUL1-202ENST00000477583 LYRM4Q9HD34 91 aa1.28□□□□□ -2.2
CACUL1-202ENST00000477583 MRPS30Q9NP92 439 aaKnown RBP1.28□□□□□ -2.2
CACUL1-202ENST00000477583 MYEF2Q9P2K5 600 aaKnown RBP1.28□□□□□ -2.2
CACUL1-202ENST00000477583 TBC1D24Q9ULP9 559 aa1.28□□□□□ -2.2
CACUL1-202ENST00000477583 LRPPRCP42704 1394 aaKnown RBP1.28□□□□□ -2.2
CACUL1-202ENST00000477583 PLEKHG2Q9H7P9 1386 aa1.28□□□□□ -2.2
CACUL1-202ENST00000477583 TECPR2O15040 1411 aa1.28□□□□□ -2.2
CACUL1-202ENST00000477583 NPATQ14207 1427 aa1.28□□□□□ -2.2
CACUL1-202ENST00000477583 CD109Q6YHK3 1445 aa1.28□□□□□ -2.2
CACUL1-202ENST00000477583 TRAPPC8Q9Y2L5 1435 aa1.28□□□□□ -2.2
CACUL1-202ENST00000477583 MED14O60244 1454 aa1.28□□□□□ -2.2
CACUL1-202ENST00000477583 LRRC7Q96NW7 1537 aa1.28□□□□□ -2.2
CACUL1-202ENST00000477583 DLC1Q96QB1 1528 aa1.28□□□□□ -2.2
CACUL1-202ENST00000477583 FRMPD1Q5SYB0 1578 aa1.28□□□□□ -2.2
CACUL1-202ENST00000477583 PIK3C2BO00750 1634 aa1.28□□□□□ -2.2
CACUL1-202ENST00000477583 MYO3AQ8NEV4 1616 aa1.28□□□□□ -2.2
CACUL1-202ENST00000477583 MAP3K4Q9Y6R4 1608 aa1.28□□□□□ -2.2
CACUL1-202ENST00000477583 KDM5AP29375 1690 aaKnown RBP1.28□□□□□ -2.2
CACUL1-202ENST00000477583 POLR1AO95602 1720 aaPredicted RBP1.28□□□□□ -2.2
CACUL1-202ENST00000477583 HIVEP2P31629 2446 aa1.28□□□□□ -2.2
CACUL1-202ENST00000477583 DOCK8Q8NF50 2099 aa1.27□□□□□ -2.21
CACUL1-202ENST00000477583 KDM6BO15054 1643 aa1.27□□□□□ -2.21
CACUL1-202ENST00000477583 TRPM1Q7Z4N2 1603 aa1.27□□□□□ -2.21
CACUL1-202ENST00000477583 USP32Q8NFA0 1604 aa1.27□□□□□ -2.21
CACUL1-202ENST00000477583 ADGRB1O14514 1584 aa1.27□□□□□ -2.21
CACUL1-202ENST00000477583 ERCC6L2Q5T890 1561 aa1.27□□□□□ -2.21
CACUL1-202ENST00000477583 BLMP54132 1417 aaPredicted RBP1.27□□□□□ -2.21
CACUL1-202ENST00000477583 FAM135BQ49AJ0 1406 aa1.27□□□□□ -2.21
CACUL1-202ENST00000477583 MROH7Q68CQ1 1323 aa1.27□□□□□ -2.21
CACUL1-202ENST00000477583 ERI3O43414 337 aaKnown RBP1.27□□□□□ -2.21
CACUL1-202ENST00000477583 SLC16A7O60669 478 aa1.27□□□□□ -2.21
CACUL1-202ENST00000477583 SLC19A2O60779 497 aa1.27□□□□□ -2.21
CACUL1-202ENST00000477583 TGM6O95932 706 aa1.27□□□□□ -2.21
CACUL1-202ENST00000477583 KRT16P08779 473 aa1.27□□□□□ -2.21
CACUL1-202ENST00000477583 UBCP0CG48 685 aaKnown RBP1.27□□□□□ -2.21
CACUL1-202ENST00000477583 ANXA8P13928 327 aa1.27□□□□□ -2.21
CACUL1-202ENST00000477583 GALP22466 123 aa1.27□□□□□ -2.21
CACUL1-202ENST00000477583 PSMB5P28074 263 aa1.27□□□□□ -2.21
CACUL1-202ENST00000477583 RPS5P46782 204 aaKnown RBP1.27□□□□□ -2.21
CACUL1-202ENST00000477583 GDI2P50395 445 aaKnown RBP1.27□□□□□ -2.21
CACUL1-202ENST00000477583 UBE2E1P51965 193 aa1.27□□□□□ -2.21
CACUL1-202ENST00000477583 CMC4P56277 68 aaPredicted RBP1.27□□□□□ -2.21
CACUL1-202ENST00000477583 GBE1Q04446 702 aa1.27□□□□□ -2.21
CACUL1-202ENST00000477583 GABRA6Q16445 453 aa1.27□□□□□ -2.21
CACUL1-202ENST00000477583 ANXA8L1Q5VT79 327 aa1.27□□□□□ -2.21
CACUL1-202ENST00000477583 OPN5Q6U736 354 aa1.27□□□□□ -2.21
CACUL1-202ENST00000477583 CD300LGQ6UXG3 332 aa1.27□□□□□ -2.21
CACUL1-202ENST00000477583 WDR82Q6UXN9 313 aa1.27□□□□□ -2.21
CACUL1-202ENST00000477583 CALHM3Q86XJ0 350 aa1.27□□□□□ -2.21
CACUL1-202ENST00000477583 ERO1BQ86YB8 467 aa1.27□□□□□ -2.21
CACUL1-202ENST00000477583 ZNF547Q8IVP9 402 aa1.27□□□□□ -2.21
CACUL1-202ENST00000477583 C8orf31Q8N9H6 132 aa1.27□□□□□ -2.21
CACUL1-202ENST00000477583 RERGQ96A58 199 aaPredicted RBP1.27□□□□□ -2.21
CACUL1-202ENST00000477583 JSRP1Q96MG2 331 aaPredicted RBP1.27□□□□□ -2.21
CACUL1-202ENST00000477583 ZFP3Q96NJ6 502 aa1.27□□□□□ -2.21
CACUL1-202ENST00000477583 OR4K3Q96R72 315 aa1.27□□□□□ -2.21
CACUL1-202ENST00000477583 KCNS3Q9BQ31 491 aa1.27□□□□□ -2.21
CACUL1-202ENST00000477583 RHOXF2Q9BQY4 288 aa1.27□□□□□ -2.21
CACUL1-202ENST00000477583 NUDT9Q9BW91 350 aa1.27□□□□□ -2.21
CACUL1-202ENST00000477583 DHX35Q9H5Z1 703 aaKnown RBP1.27□□□□□ -2.21
CACUL1-202ENST00000477583 VPS37BQ9H9H4 285 aa1.27□□□□□ -2.21
CACUL1-202ENST00000477583 AHSPQ9NZD4 102 aa1.27□□□□□ -2.21
CACUL1-202ENST00000477583 DHCR7Q9UBM7 475 aaKnown RBP1.27□□□□□ -2.21
CACUL1-202ENST00000477583 FARSAQ9Y285 508 aaKnown RBP1.27□□□□□ -2.21
CACUL1-202ENST00000477583 YARS2Q9Y2Z4 477 aaKnown RBP1.27□□□□□ -2.21
CACUL1-202ENST00000477583 HES2Q9Y543 173 aa1.27□□□□□ -2.21
CACUL1-202ENST00000477583 GPR179Q6PRD1 2367 aa1.27□□□□□ -2.21
CACUL1-202ENST00000477583 KIDINS220Q9ULH0 1771 aa1.26□□□□□ -2.21
CACUL1-202ENST00000477583 SPHKAPQ2M3C7 1700 aa1.26□□□□□ -2.21
CACUL1-202ENST00000477583 E9PCH4 1651 aa1.26□□□□□ -2.21
CACUL1-202ENST00000477583 PPRC1Q5VV67 1664 aaKnown RBP1.26□□□□□ -2.21
CACUL1-202ENST00000477583 ABCA6Q8N139 1617 aa1.26□□□□□ -2.21
CACUL1-202ENST00000477583 DIP2BQ9P265 1576 aa1.26□□□□□ -2.21
CACUL1-202ENST00000477583 DIP2CQ9Y2E4 1556 aa1.26□□□□□ -2.21
CACUL1-202ENST00000477583 ATP7BP35670 1465 aa1.26□□□□□ -2.21
CACUL1-202ENST00000477583 NLRP1Q9C000 1473 aa1.26□□□□□ -2.21
CACUL1-202ENST00000477583 SMG6Q86US8 1419 aaKnown RBP1.26□□□□□ -2.21
CACUL1-202ENST00000477583 POLR3AO14802 1390 aaPredicted RBP1.26□□□□□ -2.21
CACUL1-202ENST00000477583 KIF24Q5T7B8 1368 aa1.26□□□□□ -2.21
CACUL1-202ENST00000477583 ANKRD36BQ8N2N9 1353 aa1.26□□□□□ -2.21
CACUL1-202ENST00000477583 PIK3R4Q99570 1358 aa1.26□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms