RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 ZNF92Q03936 586 aa6.98□□□□□ -1.29
HDAC6-221ENST00000477561 SLC3A1Q07837 685 aa6.98□□□□□ -1.29
HDAC6-221ENST00000477561 PCK2Q16822 640 aa6.98□□□□□ -1.29
HDAC6-221ENST00000477561 TEX30Q5JUR7 227 aa6.98□□□□□ -1.29
HDAC6-221ENST00000477561 GLYATL3Q5SZD4 288 aa6.98□□□□□ -1.29
HDAC6-221ENST00000477561 OR2G6Q5TZ20 316 aa6.98□□□□□ -1.29
HDAC6-221ENST00000477561 FOXB2Q5VYV0 432 aa6.98□□□□□ -1.29
HDAC6-221ENST00000477561 FAHD2BQ6P2I3 314 aaPredicted RBP6.98□□□□□ -1.29
HDAC6-221ENST00000477561 PLEKHG7Q6ZR37 379 aa6.98□□□□□ -1.29
HDAC6-221ENST00000477561 MRPL21Q7Z2W9 205 aaKnown RBP6.98□□□□□ -1.29
HDAC6-221ENST00000477561 FAM220AQ7Z4H9 259 aa6.98□□□□□ -1.29
HDAC6-221ENST00000477561 KCTD20Q7Z5Y7 419 aa6.98□□□□□ -1.29
HDAC6-221ENST00000477561 PEG10Q86TG7 708 aaKnown RBP6.98□□□□□ -1.29
HDAC6-221ENST00000477561 TIGD4Q8IY51 512 aa6.98□□□□□ -1.29
HDAC6-221ENST00000477561 OR51F2Q8NH61 342 aa6.98□□□□□ -1.29
HDAC6-221ENST00000477561 ST7LQ8TDW4 575 aa6.98□□□□□ -1.29
HDAC6-221ENST00000477561 SPRYD4Q8WW59 207 aaPredicted RBP6.98□□□□□ -1.29
HDAC6-221ENST00000477561 GATAD2BQ8WXI9 593 aa6.98□□□□□ -1.29
HDAC6-221ENST00000477561 ASB17Q8WXJ9 295 aa6.98□□□□□ -1.29
HDAC6-221ENST00000477561 ISOC1Q96CN7 298 aa6.98□□□□□ -1.29
HDAC6-221ENST00000477561 FAHD2AQ96GK7 314 aa6.98□□□□□ -1.29
HDAC6-221ENST00000477561 MEGF10Q96KG7 1140 aa6.98□□□□□ -1.29
HDAC6-221ENST00000477561 OPALINQ96PE5 141 aa6.98□□□□□ -1.29
HDAC6-221ENST00000477561 AMELYQ99218 206 aa6.98□□□□□ -1.29
HDAC6-221ENST00000477561 TBX5Q99593 518 aa6.98□□□□□ -1.29
HDAC6-221ENST00000477561 SLC30A2Q9BRI3 323 aa6.98□□□□□ -1.29
HDAC6-221ENST00000477561 ABHD6Q9BV23 337 aa6.98□□□□□ -1.29
HDAC6-221ENST00000477561 FUNDC2Q9BWH2 189 aa6.98□□□□□ -1.29
HDAC6-221ENST00000477561 GCM1Q9NP62 436 aa6.98□□□□□ -1.29
HDAC6-221ENST00000477561 BRD7Q9NPI1 651 aa6.98□□□□□ -1.29
HDAC6-221ENST00000477561 DDX28Q9NUL7 540 aaKnown RBP6.98□□□□□ -1.29
HDAC6-221ENST00000477561 TMEM100Q9NV29 134 aa6.98□□□□□ -1.29
HDAC6-221ENST00000477561 BABAM2Q9NXR7 383 aa6.98□□□□□ -1.29
HDAC6-221ENST00000477561 LAMP5Q9UJQ1 280 aa6.98□□□□□ -1.29
HDAC6-221ENST00000477561 PPP1R3CQ9UQK1 317 aa6.98□□□□□ -1.29
HDAC6-221ENST00000477561 NPTNQ9Y639 398 aa6.98□□□□□ -1.29
HDAC6-221ENST00000477561 GGT3PA6NGU5 568 aa6.97□□□□□ -1.29
HDAC6-221ENST00000477561 CD300LBA8K4G0 201 aa6.97□□□□□ -1.29
HDAC6-221ENST00000477561 ZNF878C9JN71 531 aa6.97□□□□□ -1.29
HDAC6-221ENST00000477561 J3QLW9 94 aa6.97□□□□□ -1.29
HDAC6-221ENST00000477561 TBX1O43435 398 aa6.97□□□□□ -1.29
HDAC6-221ENST00000477561 IGHV2-70P01814 119 aa6.97□□□□□ -1.29
HDAC6-221ENST00000477561 ANXA2P07355 339 aaKnown RBP6.97□□□□□ -1.29
HDAC6-221ENST00000477561 CPEP16870 476 aa6.97□□□□□ -1.29
HDAC6-221ENST00000477561 ZNF19P17023 458 aa6.97□□□□□ -1.29
HDAC6-221ENST00000477561 CA6P23280 308 aa6.97□□□□□ -1.29
HDAC6-221ENST00000477561 PSMA1P25786 263 aaKnown RBP6.97□□□□□ -1.29
HDAC6-221ENST00000477561 HSD11B1P28845 292 aa6.97□□□□□ -1.29
HDAC6-221ENST00000477561 OTX1P32242 354 aaPredicted RBP6.97□□□□□ -1.29
HDAC6-221ENST00000477561 TGFBR2P37173 567 aa6.97□□□□□ -1.29
HDAC6-221ENST00000477561 CX3CR1P49238 355 aa6.97□□□□□ -1.29
HDAC6-221ENST00000477561 SRP9P49458 86 aaKnown RBP6.97□□□□□ -1.29
HDAC6-221ENST00000477561 HCCSP53701 268 aa6.97□□□□□ -1.29
HDAC6-221ENST00000477561 LCN2P80188 198 aa6.97□□□□□ -1.29
HDAC6-221ENST00000477561 EGR3Q06889 387 aa6.97□□□□□ -1.29
HDAC6-221ENST00000477561 GPR50Q13585 617 aa6.97□□□□□ -1.29
HDAC6-221ENST00000477561 TPBGQ13641 420 aa6.97□□□□□ -1.29
HDAC6-221ENST00000477561 CNPY1Q3B7I2 92 aa6.97□□□□□ -1.29
HDAC6-221ENST00000477561 GFOD2Q3B7J2 385 aa6.97□□□□□ -1.29
HDAC6-221ENST00000477561 CDONQ4KMG0 1287 aa6.97□□□□□ -1.29
HDAC6-221ENST00000477561 FAM201AQ5SY85 155 aa6.97□□□□□ -1.29
HDAC6-221ENST00000477561 KCTD18Q6PI47 426 aaPredicted RBP6.97□□□□□ -1.29
HDAC6-221ENST00000477561 DRAM2Q6UX65 266 aa6.97□□□□□ -1.29
HDAC6-221ENST00000477561 GDPGP1Q6ZNW5 385 aa6.97□□□□□ -1.29
HDAC6-221ENST00000477561 MOGAT3Q86VF5 341 aa6.97□□□□□ -1.29
HDAC6-221ENST00000477561 OTOSQ8NHW6 89 aa6.97□□□□□ -1.29
HDAC6-221ENST00000477561 THEM6Q8WUY1 208 aa6.97□□□□□ -1.29
HDAC6-221ENST00000477561 DVL3Q92997 716 aaPredicted RBP6.97□□□□□ -1.29
HDAC6-221ENST00000477561 C12orf43Q96C57 262 aaKnown RBP6.97□□□□□ -1.29
HDAC6-221ENST00000477561 RAB39BQ96DA2 213 aa6.97□□□□□ -1.29
HDAC6-221ENST00000477561 C4orf36Q96KX1 117 aa6.97□□□□□ -1.29
HDAC6-221ENST00000477561 ZNF649Q9BS31 505 aa6.97□□□□□ -1.29
HDAC6-221ENST00000477561 NDUFB11Q9NX14 153 aa6.97□□□□□ -1.29
HDAC6-221ENST00000477561 PCDHB10Q9UN67 800 aa6.97□□□□□ -1.29
HDAC6-221ENST00000477561 TRAV20A0A0B4J274 112 aa6.96□□□□□ -1.3
HDAC6-221ENST00000477561 METTL15A6NJ78 407 aa6.96□□□□□ -1.3
HDAC6-221ENST00000477561 RNF212BA8MTL3 300 aa6.96□□□□□ -1.3
HDAC6-221ENST00000477561 H3BMQ9 156 aa6.96□□□□□ -1.3
HDAC6-221ENST00000477561 TMEM178BH3BS89 294 aa6.96□□□□□ -1.3
HDAC6-221ENST00000477561 SLC22A1O15245 554 aa6.96□□□□□ -1.3
HDAC6-221ENST00000477561 PHF1O43189 567 aaPredicted RBP6.96□□□□□ -1.3
HDAC6-221ENST00000477561 AIREO43918 545 aa6.96□□□□□ -1.3
HDAC6-221ENST00000477561 SULT1C4O75897 302 aa6.96□□□□□ -1.3
HDAC6-221ENST00000477561 KRT8P05787 483 aa6.96□□□□□ -1.3
HDAC6-221ENST00000477561 H2BFMP0C1H6 154 aa6.96□□□□□ -1.3
HDAC6-221ENST00000477561 ALOX5APP20292 161 aa6.96□□□□□ -1.3
HDAC6-221ENST00000477561 PMELP40967 661 aa6.96□□□□□ -1.3
HDAC6-221ENST00000477561 MMP16P51512 607 aa6.96□□□□□ -1.3
HDAC6-221ENST00000477561 SEC61A1P61619 476 aaKnown RBP6.96□□□□□ -1.3
HDAC6-221ENST00000477561 BTG1P62324 171 aa6.96□□□□□ -1.3
HDAC6-221ENST00000477561 GRB2P62993 217 aaKnown RBP6.96□□□□□ -1.3
HDAC6-221ENST00000477561 HOXA4Q00056 320 aaPredicted RBP6.96□□□□□ -1.3
HDAC6-221ENST00000477561 MAB21L1Q13394 359 aa6.96□□□□□ -1.3
HDAC6-221ENST00000477561 ZMYND11Q15326 602 aa6.96□□□□□ -1.3
HDAC6-221ENST00000477561 OR8G1Q15617 311 aa6.96□□□□□ -1.3
HDAC6-221ENST00000477561 TRAM1Q15629 374 aa6.96□□□□□ -1.3
HDAC6-221ENST00000477561 CCDC58Q4VC31 144 aa6.96□□□□□ -1.3
HDAC6-221ENST00000477561 PRAMEF6Q5VXH4 476 aa6.96□□□□□ -1.3
HDAC6-221ENST00000477561 LIPKQ5VXJ0 399 aa6.96□□□□□ -1.3
HDAC6-221ENST00000477561 FAM57BQ71RH2 274 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms