RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 CDH15P55291 814 aa24.98■■□□□ 1.59
HOXB3-208ENST00000476342 RPL22L1Q6P5R6 122 aaKnown RBP24.98■■□□□ 1.59
HOXB3-208ENST00000476342 MOGAT3Q86VF5 341 aa24.98■■□□□ 1.59
HOXB3-208ENST00000476342 RDH10Q8IZV5 341 aa24.98■■□□□ 1.59
HOXB3-208ENST00000476342 OR5AK2Q8NH90 309 aa24.98■■□□□ 1.59
HOXB3-208ENST00000476342 RTL8AQ9BWD3 113 aa24.98■■□□□ 1.59
HOXB3-208ENST00000476342 DUSP21Q9H596 190 aa24.98■■□□□ 1.59
HOXB3-208ENST00000476342 PAK1IP1Q9NWT1 392 aaPredicted RBP24.98■■□□□ 1.59
HOXB3-208ENST00000476342 HHLA2Q9UM44 414 aa24.98■■□□□ 1.59
HOXB3-208ENST00000476342 PCDHGB5Q9Y5G0 923 aa24.98■■□□□ 1.59
HOXB3-208ENST00000476342 IGHV3-64DA0A0J9YX35 117 aa24.97■■□□□ 1.59
HOXB3-208ENST00000476342 H3BSH0 61 aa24.97■■□□□ 1.59
HOXB3-208ENST00000476342 PTBP3O95758 552 aaKnown RBP24.97■■□□□ 1.59
HOXB3-208ENST00000476342 GTF2A1P52655 376 aaPredicted RBP24.97■■□□□ 1.59
HOXB3-208ENST00000476342 PEG10Q86TG7 708 aaKnown RBP24.97■■□□□ 1.59
HOXB3-208ENST00000476342 C10orf35Q96D05 121 aa24.97■■□□□ 1.59
HOXB3-208ENST00000476342 C18orf12Q96KH6 178 aa24.97■■□□□ 1.59
HOXB3-208ENST00000476342 COX4I2Q96KJ9 171 aa24.97■■□□□ 1.59
HOXB3-208ENST00000476342 CDCA4Q9BXL8 241 aa24.97■■□□□ 1.59
HOXB3-208ENST00000476342 HIVEP1P15822 2718 aa24.96■■□□□ 1.59
HOXB3-208ENST00000476342 LOC100289279A0A1B0GTE1 492 aa24.96■■□□□ 1.59
HOXB3-208ENST00000476342 LRRC30A6NM36 301 aa24.96■■□□□ 1.59
HOXB3-208ENST00000476342 WNT4P56705 351 aa24.96■■□□□ 1.59
HOXB3-208ENST00000476342 CDK5R1Q15078 307 aa24.96■■□□□ 1.59
HOXB3-208ENST00000476342 CLVS2Q5SYC1 327 aa24.96■■□□□ 1.59
HOXB3-208ENST00000476342 PRAMEF6Q5VXH4 476 aa24.96■■□□□ 1.59
HOXB3-208ENST00000476342 NANOGP1Q8N7R0 232 aa24.96■■□□□ 1.59
HOXB3-208ENST00000476342 ZNF420Q8TAQ5 688 aaPredicted RBP24.96■■□□□ 1.59
HOXB3-208ENST00000476342 OR5P3Q8WZ94 311 aa24.96■■□□□ 1.59
HOXB3-208ENST00000476342 HPS1Q92902 700 aa24.96■■□□□ 1.59
HOXB3-208ENST00000476342 MND1Q9BWT6 205 aa24.96■■□□□ 1.59
HOXB3-208ENST00000476342 PPP1R3EQ9H7J1 279 aa24.96■■□□□ 1.59
HOXB3-208ENST00000476342 FN3KRPQ9HA64 309 aa24.96■■□□□ 1.59
HOXB3-208ENST00000476342 RGS10O43665 173 aa24.95■■□□□ 1.59
HOXB3-208ENST00000476342 ZFPL1O95159 310 aa24.95■■□□□ 1.59
HOXB3-208ENST00000476342 NRASP01111 189 aa24.95■■□□□ 1.59
HOXB3-208ENST00000476342 USF1P22415 310 aaPredicted RBP24.95■■□□□ 1.59
HOXB3-208ENST00000476342 TAS2R43P59537 309 aa24.95■■□□□ 1.59
HOXB3-208ENST00000476342 ZNF181Q2M3W8 571 aa24.95■■□□□ 1.59
HOXB3-208ENST00000476342 C1orf87Q8N0U7 546 aa24.95■■□□□ 1.59
HOXB3-208ENST00000476342 CIARTQ8N365 385 aaPredicted RBP24.95■■□□□ 1.59
HOXB3-208ENST00000476342 ZNF485Q8NCK3 441 aa24.95■■□□□ 1.59
HOXB3-208ENST00000476342 OR11L1Q8NGX0 322 aa24.95■■□□□ 1.59
HOXB3-208ENST00000476342 RAB1CQ92928 201 aa24.95■■□□□ 1.59
HOXB3-208ENST00000476342 UFSP2Q9NUQ7 469 aa24.95■■□□□ 1.59
HOXB3-208ENST00000476342 F8P00451 2351 aa24.95■■□□□ 1.58
HOXB3-208ENST00000476342 TMEM210A6NLX4 147 aa24.95■■□□□ 1.58
HOXB3-208ENST00000476342 GRPP07492 148 aa24.95■■□□□ 1.58
HOXB3-208ENST00000476342 IRF2P14316 349 aa24.95■■□□□ 1.58
HOXB3-208ENST00000476342 FOSL1P15407 271 aa24.95■■□□□ 1.58
HOXB3-208ENST00000476342 LOXL1Q08397 574 aaPredicted RBP24.95■■□□□ 1.58
HOXB3-208ENST00000476342 CEACAM21Q3KPI0 293 aa24.95■■□□□ 1.58
HOXB3-208ENST00000476342 PLCXD3Q63HM9 321 aa24.95■■□□□ 1.58
HOXB3-208ENST00000476342 XAF1Q6GPH4 301 aa24.95■■□□□ 1.58
HOXB3-208ENST00000476342 Q8TCH9 128 aa24.95■■□□□ 1.58
HOXB3-208ENST00000476342 PDCD1LG2Q9BQ51 273 aa24.95■■□□□ 1.58
HOXB3-208ENST00000476342 UBAP1Q9NZ09 502 aa24.95■■□□□ 1.58
HOXB3-208ENST00000476342 ERVK-18Q9QC07 812 aa24.95■■□□□ 1.58
HOXB3-208ENST00000476342 A0A096LNT2 108 aa24.94■■□□□ 1.58
HOXB3-208ENST00000476342 A6NLC8 198 aa24.94■■□□□ 1.58
HOXB3-208ENST00000476342 SMAD7O15105 426 aaKnown RBP24.94■■□□□ 1.58
HOXB3-208ENST00000476342 MPPED2Q15777 294 aa24.94■■□□□ 1.58
HOXB3-208ENST00000476342 CEP78Q5JTW2 689 aa24.94■■□□□ 1.58
HOXB3-208ENST00000476342 TMEM42Q69YG0 159 aa24.94■■□□□ 1.58
HOXB3-208ENST00000476342 KCTD8Q6ZWB6 473 aa24.94■■□□□ 1.58
HOXB3-208ENST00000476342 MOB3CQ70IA8 216 aa24.94■■□□□ 1.58
HOXB3-208ENST00000476342 HPSE2Q8WWQ2 592 aa24.94■■□□□ 1.58
HOXB3-208ENST00000476342 SGCDQ92629 289 aa24.94■■□□□ 1.58
HOXB3-208ENST00000476342 RNF170Q96K19 258 aa24.94■■□□□ 1.58
HOXB3-208ENST00000476342 CR1P17927 2039 aa24.93■■□□□ 1.58
HOXB3-208ENST00000476342 A6NIN4 97 aa24.93■■□□□ 1.58
HOXB3-208ENST00000476342 EEF1B2P24534 225 aaKnown RBP24.93■■□□□ 1.58
HOXB3-208ENST00000476342 PRSS48Q7RTY5 328 aa24.93■■□□□ 1.58
HOXB3-208ENST00000476342 OR1M1Q8NGA1 313 aa24.93■■□□□ 1.58
HOXB3-208ENST00000476342 OR13C3Q8NGS6 347 aa24.93■■□□□ 1.58
HOXB3-208ENST00000476342 RPS4Y2Q8TD47 263 aa24.93■■□□□ 1.58
HOXB3-208ENST00000476342 SMIM19Q96E16 107 aa24.93■■□□□ 1.58
HOXB3-208ENST00000476342 CCDC90BQ9GZT6 254 aa24.93■■□□□ 1.58
HOXB3-208ENST00000476342 WIPI2Q9Y4P8 454 aa24.93■■□□□ 1.58
HOXB3-208ENST00000476342 NPTNQ9Y639 398 aa24.93■■□□□ 1.58
HOXB3-208ENST00000476342 ACANP16112 2415 aa24.92■■□□□ 1.58
HOXB3-208ENST00000476342 ANKRD61A6NGH8 418 aa24.92■■□□□ 1.58
HOXB3-208ENST00000476342 TMEM178BH3BS89 294 aa24.92■■□□□ 1.58
HOXB3-208ENST00000476342 OGG1O15527 345 aa24.92■■□□□ 1.58
HOXB3-208ENST00000476342 GATBO75879 557 aaKnown RBP24.92■■□□□ 1.58
HOXB3-208ENST00000476342 LALBAP00709 142 aa24.92■■□□□ 1.58
HOXB3-208ENST00000476342 SERPINA3P01011 423 aa24.92■■□□□ 1.58
HOXB3-208ENST00000476342 INHBBP09529 407 aa24.92■■□□□ 1.58
HOXB3-208ENST00000476342 ZNF20P17024 532 aa24.92■■□□□ 1.58
HOXB3-208ENST00000476342 ZNF154Q13106 437 aa24.92■■□□□ 1.58
HOXB3-208ENST00000476342 OR5A2Q8NGI9 324 aa24.92■■□□□ 1.58
HOXB3-208ENST00000476342 PP6455Q8WZ26 134 aa24.92■■□□□ 1.58
HOXB3-208ENST00000476342 CHST5Q9GZS9 411 aa24.92■■□□□ 1.58
HOXB3-208ENST00000476342 GPR173Q9NS66 373 aa24.92■■□□□ 1.58
HOXB3-208ENST00000476342 DCAF16Q9NXF7 216 aa24.92■■□□□ 1.58
HOXB3-208ENST00000476342 MED13LQ71F56 2210 aa24.92■■□□□ 1.58
HOXB3-208ENST00000476342 IGHV4-61A0A0C4DH41 118 aa24.91■■□□□ 1.58
HOXB3-208ENST00000476342 OR5B21A6NL26 309 aa24.91■■□□□ 1.58
HOXB3-208ENST00000476342 THBS2P35442 1172 aa24.91■■□□□ 1.58
HOXB3-208ENST00000476342 CHN2P52757 468 aa24.91■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms