RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 PCDHB10Q9UN67 800 aa6.05□□□□□ -1.44
UBR4-212ENST00000475973 OSGIN2Q9Y236 505 aa6.05□□□□□ -1.44
UBR4-212ENST00000475973 COA3Q9Y2R0 106 aaPredicted RBP6.05□□□□□ -1.44
UBR4-212ENST00000475973 POMT1Q9Y6A1 747 aa6.05□□□□□ -1.44
UBR4-212ENST00000475973 ACACAQ13085 2346 aa6.05□□□□□ -1.44
UBR4-212ENST00000475973 CELSR3Q9NYQ7 3312 aa6.04□□□□□ -1.44
UBR4-212ENST00000475973 IGKV1D-43A0A0B4J1Z2 117 aa6.04□□□□□ -1.44
UBR4-212ENST00000475973 IGHV5-51A0A0C4DH38 117 aa6.04□□□□□ -1.44
UBR4-212ENST00000475973 TMEM235A6NFC5 223 aa6.04□□□□□ -1.44
UBR4-212ENST00000475973 TOX3O15405 576 aaPredicted RBP6.04□□□□□ -1.44
UBR4-212ENST00000475973 MTRF1O75570 445 aaKnown RBP6.04□□□□□ -1.44
UBR4-212ENST00000475973 STK17BO94768 372 aa6.04□□□□□ -1.44
UBR4-212ENST00000475973 SFT2D2O95562 160 aa6.04□□□□□ -1.44
UBR4-212ENST00000475973 ACTL6AO96019 429 aa6.04□□□□□ -1.44
UBR4-212ENST00000475973 HLA-AP01891 365 aaKnown RBP6.04□□□□□ -1.44
UBR4-212ENST00000475973 FCGR3AP08637 254 aa6.04□□□□□ -1.44
UBR4-212ENST00000475973 LIFP15018 202 aa6.04□□□□□ -1.44
UBR4-212ENST00000475973 PMELP40967 661 aa6.04□□□□□ -1.44
UBR4-212ENST00000475973 APOBEC1P41238 236 aaKnown RBP6.04□□□□□ -1.44
UBR4-212ENST00000475973 HIST1H3AP68431 136 aa6.04□□□□□ -1.44
UBR4-212ENST00000475973 ADAM8P78325 824 aa6.04□□□□□ -1.44
UBR4-212ENST00000475973 MC2RQ01718 297 aa6.04□□□□□ -1.44
UBR4-212ENST00000475973 SCRN3Q0VDG4 424 aa6.04□□□□□ -1.44
UBR4-212ENST00000475973 PJVKQ0ZLH3 352 aa6.04□□□□□ -1.44
UBR4-212ENST00000475973 SRSF6Q13247 344 aaKnown RBP6.04□□□□□ -1.44
UBR4-212ENST00000475973 SURF2Q15527 256 aaPredicted RBP6.04□□□□□ -1.44
UBR4-212ENST00000475973 NNATQ16517 81 aa6.04□□□□□ -1.44
UBR4-212ENST00000475973 CDNFQ49AH0 187 aa6.04□□□□□ -1.44
UBR4-212ENST00000475973 HIST2H3PS2Q5TEC6 136 aa6.04□□□□□ -1.44
UBR4-212ENST00000475973 AADACL3Q5VUY0 350 aa6.04□□□□□ -1.44
UBR4-212ENST00000475973 TMEM268Q5VZI3 342 aa6.04□□□□□ -1.44
UBR4-212ENST00000475973 SP5Q6BEB4 398 aaPredicted RBP6.04□□□□□ -1.44
UBR4-212ENST00000475973 PRSS54Q6PEW0 395 aa6.04□□□□□ -1.44
UBR4-212ENST00000475973 BTNL8Q6UX41 500 aa6.04□□□□□ -1.44
UBR4-212ENST00000475973 HIST2H3AQ71DI3 136 aa6.04□□□□□ -1.44
UBR4-212ENST00000475973 H1FNTQ75WM6 255 aaPredicted RBP6.04□□□□□ -1.44
UBR4-212ENST00000475973 SLC16A14Q7RTX9 510 aa6.04□□□□□ -1.44
UBR4-212ENST00000475973 MARCH3Q86UD3 253 aa6.04□□□□□ -1.44
UBR4-212ENST00000475973 LDLRAD3Q86YD5 345 aa6.04□□□□□ -1.44
UBR4-212ENST00000475973 ZNF584Q8IVC4 421 aa6.04□□□□□ -1.44
UBR4-212ENST00000475973 D2HGDHQ8N465 521 aa6.04□□□□□ -1.44
UBR4-212ENST00000475973 ZSCAN4Q8NAM6 433 aaPredicted RBP6.04□□□□□ -1.44
UBR4-212ENST00000475973 GATSQ8NAP1 163 aa6.04□□□□□ -1.44
UBR4-212ENST00000475973 POC1AQ8NBT0 407 aa6.04□□□□□ -1.44
UBR4-212ENST00000475973 OR1M1Q8NGA1 313 aa6.04□□□□□ -1.44
UBR4-212ENST00000475973 OR10R2Q8NGX6 335 aa6.04□□□□□ -1.44
UBR4-212ENST00000475973 OR8K3Q8NH51 312 aa6.04□□□□□ -1.44
UBR4-212ENST00000475973 ELP5Q8TE02 316 aa6.04□□□□□ -1.44
UBR4-212ENST00000475973 EXTL1Q92935 676 aa6.04□□□□□ -1.44
UBR4-212ENST00000475973 TSLPQ969D9 159 aa6.04□□□□□ -1.44
UBR4-212ENST00000475973 MMABQ96EY8 250 aaPredicted RBP6.04□□□□□ -1.44
UBR4-212ENST00000475973 ADAT3Q96EY9 351 aaPredicted RBP6.04□□□□□ -1.44
UBR4-212ENST00000475973 RRNAD1Q96FB5 475 aaKnown RBP6.04□□□□□ -1.44
UBR4-212ENST00000475973 OR5B2Q96R09 309 aa6.04□□□□□ -1.44
UBR4-212ENST00000475973 PHB2Q99623 299 aa6.04□□□□□ -1.44
UBR4-212ENST00000475973 RTBDNQ9BSG5 229 aaPredicted RBP6.04□□□□□ -1.44
UBR4-212ENST00000475973 TM2D1Q9BX74 207 aa6.04□□□□□ -1.44
UBR4-212ENST00000475973 WNT10AQ9GZT5 417 aa6.04□□□□□ -1.44
UBR4-212ENST00000475973 SLC26A1Q9H2B4 701 aa6.04□□□□□ -1.44
UBR4-212ENST00000475973 HIPK2Q9H2X6 1198 aa6.04□□□□□ -1.44
UBR4-212ENST00000475973 C5orf66Q9H5L9 145 aa6.04□□□□□ -1.44
UBR4-212ENST00000475973 PNRC2Q9NPJ4 139 aaKnown RBP6.04□□□□□ -1.44
UBR4-212ENST00000475973 MMP26Q9NRE1 261 aa6.04□□□□□ -1.44
UBR4-212ENST00000475973 CUTCQ9NTM9 273 aa6.04□□□□□ -1.44
UBR4-212ENST00000475973 OCIAD1Q9NX40 245 aa6.04□□□□□ -1.44
UBR4-212ENST00000475973 COA4Q9NYJ1 87 aa6.04□□□□□ -1.44
UBR4-212ENST00000475973 B3GAT1Q9P2W7 334 aa6.04□□□□□ -1.44
UBR4-212ENST00000475973 GHRLQ9UBU3 117 aa6.04□□□□□ -1.44
UBR4-212ENST00000475973 ATRXP46100 2492 aa6.04□□□□□ -1.44
UBR4-212ENST00000475973 URB1O60287 2271 aaKnown RBP6.04□□□□□ -1.44
UBR4-212ENST00000475973 GOLGA4Q13439 2230 aaKnown RBP6.03□□□□□ -1.44
UBR4-212ENST00000475973 MPDZO75970 2070 aa6.03□□□□□ -1.44
UBR4-212ENST00000475973 KNL1Q8NG31 2342 aa6.03□□□□□ -1.44
UBR4-212ENST00000475973 SCN2AQ99250 2005 aa6.03□□□□□ -1.44
UBR4-212ENST00000475973 LOC101059948A0A1B0GTJ6 334 aa6.03□□□□□ -1.44
UBR4-212ENST00000475973 MEX3AA1L020 520 aaKnown RBP6.03□□□□□ -1.44
UBR4-212ENST00000475973 LIPT2A6NK58 231 aa6.03□□□□□ -1.44
UBR4-212ENST00000475973 C17orf51A8MQB3 221 aa6.03□□□□□ -1.44
UBR4-212ENST00000475973 TAAR5O14804 337 aa6.03□□□□□ -1.44
UBR4-212ENST00000475973 HCRTR2O43614 444 aa6.03□□□□□ -1.44
UBR4-212ENST00000475973 EFNA2O43921 213 aa6.03□□□□□ -1.44
UBR4-212ENST00000475973 LMX1BO60663 402 aa6.03□□□□□ -1.44
UBR4-212ENST00000475973 AHSA1O95433 338 aa6.03□□□□□ -1.44
UBR4-212ENST00000475973 APOC3P02656 99 aa6.03□□□□□ -1.44
UBR4-212ENST00000475973 GAPDHP04406 335 aaKnown RBP6.03□□□□□ -1.44
UBR4-212ENST00000475973 FCER2P06734 321 aa6.03□□□□□ -1.44
UBR4-212ENST00000475973 SPARCP09486 303 aa6.03□□□□□ -1.44
UBR4-212ENST00000475973 FAM87AP0C7U9 286 aa6.03□□□□□ -1.44
UBR4-212ENST00000475973 TPT1P13693 172 aaKnown RBP6.03□□□□□ -1.44
UBR4-212ENST00000475973 HLA-DOBP13765 273 aa6.03□□□□□ -1.44
UBR4-212ENST00000475973 HPGDP15428 266 aa6.03□□□□□ -1.44
UBR4-212ENST00000475973 ABOP16442 354 aa6.03□□□□□ -1.44
UBR4-212ENST00000475973 FPR2P25090 351 aa6.03□□□□□ -1.44
UBR4-212ENST00000475973 OTX1P32242 354 aaPredicted RBP6.03□□□□□ -1.44
UBR4-212ENST00000475973 MAS1LP35410 378 aa6.03□□□□□ -1.44
UBR4-212ENST00000475973 DLSTP36957 453 aa6.03□□□□□ -1.44
UBR4-212ENST00000475973 RFC3P40938 356 aa6.03□□□□□ -1.44
UBR4-212ENST00000475973 PTGDSP41222 190 aa6.03□□□□□ -1.44
UBR4-212ENST00000475973 CBX5P45973 191 aa6.03□□□□□ -1.44
UBR4-212ENST00000475973 DAP3P51398 398 aaKnown RBP6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms