RNA–Protein interactions for RNA: ENST00000475580.5

VPS8-222, Transcript of VPS8, CORVET complex subunit, human

TSL 2

Gene VPS8, Length 318 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS8-222	ENST00000475580	ANXA2P2	A6NMY6	339 aa		13.79	□□□□□ -0.2
VPS8-222	ENST00000475580	LOC110117498-PIK3R3	F6TDL0	507 aa		13.79	□□□□□ -0.2
VPS8-222	ENST00000475580	ENTPD6	O75354	484 aa		13.79	□□□□□ -0.2
VPS8-222	ENST00000475580	FCN3	O75636	299 aa		13.79	□□□□□ -0.2
VPS8-222	ENST00000475580	MAP2K3	P46734	347 aa		13.79	□□□□□ -0.2
VPS8-222	ENST00000475580	SNRPG	P62308	76 aa	Known RBP	13.79	□□□□□ -0.2
VPS8-222	ENST00000475580	GNB2	P62879	340 aa		13.79	□□□□□ -0.2
VPS8-222	ENST00000475580	FAM76B	Q5HYJ3	339 aa		13.79	□□□□□ -0.2
VPS8-222	ENST00000475580	WDR25	Q64LD2	544 aa	Predicted RBP	13.79	□□□□□ -0.2
VPS8-222	ENST00000475580	ELMOD2	Q8IZ81	293 aa		13.79	□□□□□ -0.2
VPS8-222	ENST00000475580	TEX29	Q8N6K0	151 aa		13.79	□□□□□ -0.2
VPS8-222	ENST00000475580	LRRC29	Q8WV35	223 aa		13.79	□□□□□ -0.2
VPS8-222	ENST00000475580	TMEM158	Q8WZ71	300 aa		13.79	□□□□□ -0.2
VPS8-222	ENST00000475580	FAM71F1	Q96KD3	344 aa	Predicted RBP	13.79	□□□□□ -0.2
VPS8-222	ENST00000475580	MICU1	Q9BPX6	476 aa		13.79	□□□□□ -0.2
VPS8-222	ENST00000475580	C9orf16	Q9BUW7	83 aa		13.79	□□□□□ -0.2
VPS8-222	ENST00000475580	RTL8A	Q9BWD3	113 aa		13.79	□□□□□ -0.2
VPS8-222	ENST00000475580	MOB1A	Q9H8S9	216 aa		13.79	□□□□□ -0.2
VPS8-222	ENST00000475580	IMPAD1	Q9NX62	359 aa		13.79	□□□□□ -0.2
VPS8-222	ENST00000475580	OR52A1	Q9UKL2	312 aa		13.79	□□□□□ -0.2
VPS8-222	ENST00000475580	IGHV2-70D	A0A0C4DH43	119 aa		13.78	□□□□□ -0.2
VPS8-222	ENST00000475580		J3QRE1	110 aa		13.78	□□□□□ -0.2
VPS8-222	ENST00000475580	CDIPT	O14735	213 aa		13.78	□□□□□ -0.2
VPS8-222	ENST00000475580	ATP6V1B1	P15313	513 aa		13.78	□□□□□ -0.2
VPS8-222	ENST00000475580	GABRB1	P18505	474 aa		13.78	□□□□□ -0.2
VPS8-222	ENST00000475580	EPHA1	P21709	976 aa		13.78	□□□□□ -0.2
VPS8-222	ENST00000475580	CFHR2	P36980	270 aa		13.78	□□□□□ -0.2
VPS8-222	ENST00000475580	ZNF85	Q03923	595 aa		13.78	□□□□□ -0.2
VPS8-222	ENST00000475580	PAX8	Q06710	450 aa		13.78	□□□□□ -0.2
VPS8-222	ENST00000475580	OCLN	Q16625	522 aa		13.78	□□□□□ -0.2
VPS8-222	ENST00000475580	NLRC3	Q7RTR2	1065 aa		13.78	□□□□□ -0.2
VPS8-222	ENST00000475580	ZDHHC23	Q8IYP9	409 aa		13.78	□□□□□ -0.2
VPS8-222	ENST00000475580	SEMA6D	Q8NFY4	1073 aa		13.78	□□□□□ -0.2
VPS8-222	ENST00000475580	OR10H4	Q8NGA5	316 aa		13.78	□□□□□ -0.2
VPS8-222	ENST00000475580	NANP	Q8TBE9	248 aa		13.78	□□□□□ -0.2
VPS8-222	ENST00000475580	RPL3L	Q92901	407 aa	Known RBP	13.78	□□□□□ -0.2
VPS8-222	ENST00000475580	RFK	Q969G6	155 aa		13.78	□□□□□ -0.2
VPS8-222	ENST00000475580	ITFG2	Q969R8	447 aa		13.78	□□□□□ -0.2
VPS8-222	ENST00000475580	SEH1L	Q96EE3	360 aa		13.78	□□□□□ -0.2
VPS8-222	ENST00000475580	ABCB9	Q9NP78	766 aa		13.78	□□□□□ -0.2
VPS8-222	ENST00000475580	CLN8	Q9UBY8	286 aa		13.78	□□□□□ -0.2
VPS8-222	ENST00000475580	AASS	Q9UDR5	926 aa		13.78	□□□□□ -0.2
VPS8-222	ENST00000475580	SLC22A13	Q9Y226	551 aa		13.78	□□□□□ -0.2
VPS8-222	ENST00000475580	IGHV3OR15-7	A0A075B7D8	119 aa		13.77	□□□□□ -0.21
VPS8-222	ENST00000475580	TRAV38-1	A0A0B4J264	116 aa		13.77	□□□□□ -0.21
VPS8-222	ENST00000475580	TMEM210	A6NLX4	147 aa		13.77	□□□□□ -0.21
VPS8-222	ENST00000475580	SRRM5	B3KS81	715 aa		13.77	□□□□□ -0.21
VPS8-222	ENST00000475580	C22orf46	C9J442	243 aa		13.77	□□□□□ -0.21
VPS8-222	ENST00000475580	TCF21	O43680	179 aa		13.77	□□□□□ -0.21
VPS8-222	ENST00000475580	DHRS3	O75911	302 aa		13.77	□□□□□ -0.21
VPS8-222	ENST00000475580	GYPA	P02724	150 aa		13.77	□□□□□ -0.21
VPS8-222	ENST00000475580	KRT8	P05787	483 aa		13.77	□□□□□ -0.21
VPS8-222	ENST00000475580	FAH	P16930	419 aa		13.77	□□□□□ -0.21
VPS8-222	ENST00000475580	ISL1	P61371	349 aa		13.77	□□□□□ -0.21
VPS8-222	ENST00000475580	ELF3	P78545	371 aa	Predicted RBP	13.77	□□□□□ -0.21
VPS8-222	ENST00000475580	KCNJ8	Q15842	424 aa		13.77	□□□□□ -0.21
VPS8-222	ENST00000475580	DMRTC1	Q5HYR2	192 aa		13.77	□□□□□ -0.21
VPS8-222	ENST00000475580	KLF17	Q5JT82	389 aa	Predicted RBP	13.77	□□□□□ -0.21
VPS8-222	ENST00000475580	BCL2L15	Q5TBC7	163 aa		13.77	□□□□□ -0.21
VPS8-222	ENST00000475580	ZBTB49	Q6ZSB9	765 aa		13.77	□□□□□ -0.21
VPS8-222	ENST00000475580		Q6ZSR3	168 aa		13.77	□□□□□ -0.21
VPS8-222	ENST00000475580	COMMD2	Q86X83	199 aa		13.77	□□□□□ -0.21
VPS8-222	ENST00000475580	YIPF7	Q8N8F6	280 aa		13.77	□□□□□ -0.21
VPS8-222	ENST00000475580	SCCPDH	Q8NBX0	429 aa		13.77	□□□□□ -0.21
VPS8-222	ENST00000475580	RAB40A	Q8WXH6	277 aa		13.77	□□□□□ -0.21
VPS8-222	ENST00000475580	RNF166	Q96A37	237 aa	Predicted RBP	13.77	□□□□□ -0.21
VPS8-222	ENST00000475580	RNF170	Q96K19	258 aa		13.77	□□□□□ -0.21
VPS8-222	ENST00000475580	SMURF1	Q9HCE7	757 aa		13.77	□□□□□ -0.21
VPS8-222	ENST00000475580	TRIM36	Q9NQ86	728 aa		13.77	□□□□□ -0.21
VPS8-222	ENST00000475580	AKAP8L	Q9ULX6	646 aa	Known RBP eCLIP	13.77	□□□□□ -0.21
VPS8-222	ENST00000475580	GTF2A1L	Q9UNN4	478 aa		13.77	□□□□□ -0.21
VPS8-222	ENST00000475580	PIGL	Q9Y2B2	252 aa		13.77	□□□□□ -0.21
VPS8-222	ENST00000475580	SNX5	Q9Y5X3	404 aa		13.77	□□□□□ -0.21
VPS8-222	ENST00000475580	AUP1	Q9Y679	476 aa		13.77	□□□□□ -0.21
VPS8-222	ENST00000475580	KIR2DS1	A0A191URI9	304 aa		13.76	□□□□□ -0.21
VPS8-222	ENST00000475580	METTL15	A6NJ78	407 aa		13.76	□□□□□ -0.21
VPS8-222	ENST00000475580	P2RY10	O00398	339 aa		13.76	□□□□□ -0.21
VPS8-222	ENST00000475580	ADAM20	O43506	726 aa		13.76	□□□□□ -0.21
VPS8-222	ENST00000475580	NDUFA2	O43678	99 aa		13.76	□□□□□ -0.21
VPS8-222	ENST00000475580	SULT1C4	O75897	302 aa		13.76	□□□□□ -0.21
VPS8-222	ENST00000475580	RPP14	O95059	124 aa	Known RBP	13.76	□□□□□ -0.21
VPS8-222	ENST00000475580	VENTX	O95231	258 aa		13.76	□□□□□ -0.21
VPS8-222	ENST00000475580	CCL1	P22362	96 aa		13.76	□□□□□ -0.21
VPS8-222	ENST00000475580	MTNR1A	P48039	350 aa		13.76	□□□□□ -0.21
VPS8-222	ENST00000475580	GPM6A	P51674	278 aa		13.76	□□□□□ -0.21
VPS8-222	ENST00000475580	RIPPLY1	Q0D2K3	151 aa		13.76	□□□□□ -0.21
VPS8-222	ENST00000475580	TUSC1	Q2TAM9	212 aa		13.76	□□□□□ -0.21
VPS8-222	ENST00000475580	CEP78	Q5JTW2	689 aa		13.76	□□□□□ -0.21
VPS8-222	ENST00000475580	ZBTB37	Q5TC79	503 aa		13.76	□□□□□ -0.21
VPS8-222	ENST00000475580	LIPN	Q5VXI9	398 aa		13.76	□□□□□ -0.21
VPS8-222	ENST00000475580	TMEM42	Q69YG0	159 aa		13.76	□□□□□ -0.21
VPS8-222	ENST00000475580	CATSPERD	Q86XM0	798 aa		13.76	□□□□□ -0.21
VPS8-222	ENST00000475580	ENTHD1	Q8IYW4	607 aa		13.76	□□□□□ -0.21
VPS8-222	ENST00000475580	OR10Z1	Q8NGY1	313 aa		13.76	□□□□□ -0.21
VPS8-222	ENST00000475580	OR14K1	Q8NGZ2	314 aa		13.76	□□□□□ -0.21
VPS8-222	ENST00000475580	SPATA3	Q8NHX4	192 aa		13.76	□□□□□ -0.21
VPS8-222	ENST00000475580	RORB	Q92753	470 aa		13.76	□□□□□ -0.21
VPS8-222	ENST00000475580	RNFT2	Q96EX2	444 aa		13.76	□□□□□ -0.21
VPS8-222	ENST00000475580	OCEL1	Q9H607	264 aa		13.76	□□□□□ -0.21
VPS8-222	ENST00000475580	KAAG1	Q9UBP8	84 aa		13.76	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms