RNA–Protein interactions for RNA: ENST00000473191.1

USP40-212, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-212ENST00000473191 SRRM5B3KS81 715 aa13.75□□□□□ -0.21
USP40-212ENST00000473191 MAGEB4O15481 346 aaPredicted RBP13.75□□□□□ -0.21
USP40-212ENST00000473191 AKR7A2O43488 359 aa13.75□□□□□ -0.21
USP40-212ENST00000473191 PRKYO43930 277 aa13.75□□□□□ -0.21
USP40-212ENST00000473191 RHBDL1O75783 438 aa13.75□□□□□ -0.21
USP40-212ENST00000473191 APOC1P02654 83 aa13.75□□□□□ -0.21
USP40-212ENST00000473191 ANXA8P13928 327 aa13.75□□□□□ -0.21
USP40-212ENST00000473191 CRISP1P54107 249 aa13.75□□□□□ -0.21
USP40-212ENST00000473191 RELBQ01201 579 aa13.75□□□□□ -0.21
USP40-212ENST00000473191 MZT1Q08AG7 82 aa13.75□□□□□ -0.21
USP40-212ENST00000473191 IKZF1Q13422 519 aa13.75□□□□□ -0.21
USP40-212ENST00000473191 SNAPC1Q16533 368 aa13.75□□□□□ -0.21
USP40-212ENST00000473191 MICBQ29980 383 aa13.75□□□□□ -0.21
USP40-212ENST00000473191 DNAL1Q4LDG9 190 aa13.75□□□□□ -0.21
USP40-212ENST00000473191 CD276Q5ZPR3 534 aa13.75□□□□□ -0.21
USP40-212ENST00000473191 GALNT4Q8N4A0 578 aa13.75□□□□□ -0.21
USP40-212ENST00000473191 ZNF454Q8N9F8 522 aa13.75□□□□□ -0.21
USP40-212ENST00000473191 SCCPDHQ8NBX0 429 aa13.75□□□□□ -0.21
USP40-212ENST00000473191 ZDHHC16Q969W1 377 aa13.75□□□□□ -0.21
USP40-212ENST00000473191 UTP4Q969X6 686 aaKnown RBP13.75□□□□□ -0.21
USP40-212ENST00000473191 TEAD3Q99594 435 aa13.75□□□□□ -0.21
USP40-212ENST00000473191 CHIAQ9BZP6 476 aa13.75□□□□□ -0.21
USP40-212ENST00000473191 SEMA6AQ9H2E6 1030 aa13.75□□□□□ -0.21
USP40-212ENST00000473191 FAM206AQ9NX38 181 aa13.75□□□□□ -0.21
USP40-212ENST00000473191 RPUSD1Q9UJJ7 312 aaKnown RBP13.75□□□□□ -0.21
USP40-212ENST00000473191 P2RY10O00398 339 aa13.74□□□□□ -0.21
USP40-212ENST00000473191 GSC2O15499 205 aa13.74□□□□□ -0.21
USP40-212ENST00000473191 NDUFA2O43678 99 aa13.74□□□□□ -0.21
USP40-212ENST00000473191 DNAJC8O75937 253 aaPredicted RBP13.74□□□□□ -0.21
USP40-212ENST00000473191 CST4P01036 141 aa13.74□□□□□ -0.21
USP40-212ENST00000473191 MELTFP08582 738 aa13.74□□□□□ -0.21
USP40-212ENST00000473191 CFL1P23528 166 aaKnown RBP13.74□□□□□ -0.21
USP40-212ENST00000473191 DCTDP32321 178 aa13.74□□□□□ -0.21
USP40-212ENST00000473191 GNALP38405 381 aa13.74□□□□□ -0.21
USP40-212ENST00000473191 MFGE8Q08431 387 aaPredicted RBP13.74□□□□□ -0.21
USP40-212ENST00000473191 PTGES3Q15185 160 aaKnown RBP13.74□□□□□ -0.21
USP40-212ENST00000473191 CEP78Q5JTW2 689 aa13.74□□□□□ -0.21
USP40-212ENST00000473191 SLC35D3Q5M8T2 416 aa13.74□□□□□ -0.21
USP40-212ENST00000473191 METTL11BQ5VVY1 283 aa13.74□□□□□ -0.21
USP40-212ENST00000473191 STUMQ69YW2 141 aa13.74□□□□□ -0.21
USP40-212ENST00000473191 FAHD1Q6P587 224 aa13.74□□□□□ -0.21
USP40-212ENST00000473191 FIP1L1Q6UN15 594 aaKnown RBP13.74□□□□□ -0.21
USP40-212ENST00000473191 KRT77Q7Z794 578 aa13.74□□□□□ -0.21
USP40-212ENST00000473191 PIP4P2Q8N4L2 257 aa13.74□□□□□ -0.21
USP40-212ENST00000473191 PNLDC1Q8NA58 520 aaKnown RBP13.74□□□□□ -0.21
USP40-212ENST00000473191 CSNK2A3Q8NEV1 391 aa13.74□□□□□ -0.21
USP40-212ENST00000473191 SGMS2Q8NHU3 365 aa13.74□□□□□ -0.21
USP40-212ENST00000473191 TMIGD2Q96BF3 282 aa13.74□□□□□ -0.21
USP40-212ENST00000473191 RNF170Q96K19 258 aa13.74□□□□□ -0.21
USP40-212ENST00000473191 RGCCQ9H4X1 137 aa13.74□□□□□ -0.21
USP40-212ENST00000473191 SP140LQ9H930 580 aa13.74□□□□□ -0.21
USP40-212ENST00000473191 ZMAT3Q9HA38 289 aaKnown RBP13.74□□□□□ -0.21
USP40-212ENST00000473191 PAPOLBQ9NRJ5 636 aaKnown RBP13.74□□□□□ -0.21
USP40-212ENST00000473191 LAMP5Q9UJQ1 280 aa13.74□□□□□ -0.21
USP40-212ENST00000473191 CMYA5Q8N3K9 4069 aa13.73□□□□□ -0.21
USP40-212ENST00000473191 IGHV1-69DA0A0B4J2H0 117 aa13.73□□□□□ -0.21
USP40-212ENST00000473191 A0A0U1RQK1 487 aa13.73□□□□□ -0.21
USP40-212ENST00000473191 IGHV1-69P01742 117 aa13.73□□□□□ -0.21
USP40-212ENST00000473191 LIPFP07098 398 aa13.73□□□□□ -0.21
USP40-212ENST00000473191 MUC1P15941 1255 aaPredicted RBP13.73□□□□□ -0.21
USP40-212ENST00000473191 GPM6AP51674 278 aa13.73□□□□□ -0.21
USP40-212ENST00000473191 DGUOKQ16854 277 aa13.73□□□□□ -0.21
USP40-212ENST00000473191 FAM76BQ5HYJ3 339 aa13.73□□□□□ -0.21
USP40-212ENST00000473191 PLEKHG7Q6ZR37 379 aa13.73□□□□□ -0.21
USP40-212ENST00000473191 KCTD8Q6ZWB6 473 aa13.73□□□□□ -0.21
USP40-212ENST00000473191 VMO1Q7Z5L0 202 aa13.73□□□□□ -0.21
USP40-212ENST00000473191 LY6G5BQ8NDX9 201 aa13.73□□□□□ -0.21
USP40-212ENST00000473191 MICU1Q9BPX6 476 aa13.73□□□□□ -0.21
USP40-212ENST00000473191 RTL8AQ9BWD3 113 aa13.73□□□□□ -0.21
USP40-212ENST00000473191 CNTD2Q9H8S5 307 aa13.73□□□□□ -0.21
USP40-212ENST00000473191 ELL3Q9HB65 397 aaPredicted RBP13.73□□□□□ -0.21
USP40-212ENST00000473191 TRIM36Q9NQ86 728 aa13.73□□□□□ -0.21
USP40-212ENST00000473191 SIRT7Q9NRC8 400 aa13.73□□□□□ -0.21
USP40-212ENST00000473191 ACOXLQ9NUZ1 547 aa13.73□□□□□ -0.21
USP40-212ENST00000473191 MPC1Q9Y5U8 109 aa13.73□□□□□ -0.21
USP40-212ENST00000473191 TMEM269A0A1B0GVZ9 245 aa13.72□□□□□ -0.21
USP40-212ENST00000473191 ANXA2P2A6NMY6 339 aa13.72□□□□□ -0.21
USP40-212ENST00000473191 IGLV3-1P01715 115 aa13.72□□□□□ -0.21
USP40-212ENST00000473191 TGM4P49221 684 aa13.72□□□□□ -0.21
USP40-212ENST00000473191 IL5RAQ01344 420 aa13.72□□□□□ -0.21
USP40-212ENST00000473191 KLRD1Q13241 179 aa13.72□□□□□ -0.21
USP40-212ENST00000473191 CDONQ4KMG0 1287 aa13.72□□□□□ -0.21
USP40-212ENST00000473191 SHISA2Q6UWI4 295 aa13.72□□□□□ -0.21
USP40-212ENST00000473191 ZDHHC23Q8IYP9 409 aa13.72□□□□□ -0.21
USP40-212ENST00000473191 PNKDQ8N490 385 aa13.72□□□□□ -0.21
USP40-212ENST00000473191 Q8N7P7 452 aa13.72□□□□□ -0.21
USP40-212ENST00000473191 GATAD2BQ8WXI9 593 aa13.72□□□□□ -0.21
USP40-212ENST00000473191 FAM71F1Q96KD3 344 aaPredicted RBP13.72□□□□□ -0.21
USP40-212ENST00000473191 GAFA1Q96PS6 74 aa13.72□□□□□ -0.21
USP40-212ENST00000473191 RAB3IPQ96QF0 476 aaPredicted RBP13.72□□□□□ -0.21
USP40-212ENST00000473191 PBOV1Q9GZY1 135 aa13.72□□□□□ -0.21
USP40-212ENST00000473191 NIPAL2Q9H841 368 aa13.72□□□□□ -0.21
USP40-212ENST00000473191 HAO2Q9NYQ3 351 aa13.72□□□□□ -0.21
USP40-212ENST00000473191 C1RLQ9NZP8 487 aa13.72□□□□□ -0.21
USP40-212ENST00000473191 ONECUT1Q9UBC0 465 aa13.72□□□□□ -0.21
USP40-212ENST00000473191 ZNF391Q9UJN7 358 aa13.72□□□□□ -0.21
USP40-212ENST00000473191 A0A1W2PRD5 423 aa13.71□□□□□ -0.21
USP40-212ENST00000473191 A0A1W2PRF3 423 aa13.71□□□□□ -0.21
USP40-212ENST00000473191 A0A1W2PRM7 423 aa13.71□□□□□ -0.21
USP40-212ENST00000473191 WIPF1O43516 503 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms