RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 IGLV7-43P04211 117 aa2.55□□□□□ -2
CLK1-209ENST00000472679 IGKV1D-39P04432 117 aa2.55□□□□□ -2
CLK1-209ENST00000472679 PFN1P07737 140 aaKnown RBP2.55□□□□□ -2
CLK1-209ENST00000472679 FGF4P08620 206 aa2.55□□□□□ -2
CLK1-209ENST00000472679 GBE1Q04446 702 aa2.55□□□□□ -2
CLK1-209ENST00000472679 BTN1A1Q13410 526 aa2.55□□□□□ -2
CLK1-209ENST00000472679 IL18Q14116 193 aa2.55□□□□□ -2
CLK1-209ENST00000472679 PHLPP2Q6ZVD8 1323 aa2.55□□□□□ -2
CLK1-209ENST00000472679 MICU2Q8IYU8 434 aa2.55□□□□□ -2
CLK1-209ENST00000472679 ORMDL3Q8N138 153 aa2.55□□□□□ -2
CLK1-209ENST00000472679 OR4M2Q8NGB6 313 aa2.55□□□□□ -2
CLK1-209ENST00000472679 RXFP2Q8WXD0 754 aa2.55□□□□□ -2
CLK1-209ENST00000472679 TMEM159Q96B96 161 aa2.55□□□□□ -2
CLK1-209ENST00000472679 UBE2E2Q96LR5 201 aa2.55□□□□□ -2
CLK1-209ENST00000472679 C9orf72Q96LT7 481 aa2.55□□□□□ -2
CLK1-209ENST00000472679 NAA50Q9GZZ1 169 aaKnown RBP2.55□□□□□ -2
CLK1-209ENST00000472679 CD209Q9NNX6 404 aa2.55□□□□□ -2
CLK1-209ENST00000472679 PXMP2Q9NR77 195 aa2.55□□□□□ -2
CLK1-209ENST00000472679 TREX1Q9NSU2 369 aa2.55□□□□□ -2
CLK1-209ENST00000472679 ZNF586Q9NXT0 402 aa2.55□□□□□ -2
CLK1-209ENST00000472679 ZNF230Q9UIE0 474 aaPredicted RBP2.55□□□□□ -2
CLK1-209ENST00000472679 ISPDA4D126 451 aa2.54□□□□□ -2
CLK1-209ENST00000472679 OR6C70A6NIJ9 312 aa2.54□□□□□ -2
CLK1-209ENST00000472679 CENPBD1B2RD01 187 aa2.54□□□□□ -2
CLK1-209ENST00000472679 PSPHP1O15172 72 aa2.54□□□□□ -2
CLK1-209ENST00000472679 CCDC22O60826 627 aa2.54□□□□□ -2
CLK1-209ENST00000472679 MPDU1O75352 247 aa2.54□□□□□ -2
CLK1-209ENST00000472679 SCELO95171 688 aa2.54□□□□□ -2
CLK1-209ENST00000472679 CATP04040 527 aaKnown RBP2.54□□□□□ -2
CLK1-209ENST00000472679 ANXA8P13928 327 aa2.54□□□□□ -2
CLK1-209ENST00000472679 GPR1P46091 355 aa2.54□□□□□ -2
CLK1-209ENST00000472679 PPP1CAP62136 330 aa2.54□□□□□ -2
CLK1-209ENST00000472679 KDSRQ06136 332 aa2.54□□□□□ -2
CLK1-209ENST00000472679 ANXA8L1Q5VT79 327 aa2.54□□□□□ -2
CLK1-209ENST00000472679 DAZ4Q86SG3 579 aaKnown RBP2.54□□□□□ -2
CLK1-209ENST00000472679 KIF2BQ8N4N8 673 aa2.54□□□□□ -2
CLK1-209ENST00000472679 OR52N1Q8NH53 320 aa2.54□□□□□ -2
CLK1-209ENST00000472679 REEP1Q9H902 201 aa2.54□□□□□ -2
CLK1-209ENST00000472679 VPS37BQ9H9H4 285 aa2.54□□□□□ -2
CLK1-209ENST00000472679 DAZ1Q9NQZ3 744 aaKnown RBP2.54□□□□□ -2
CLK1-209ENST00000472679 HEBP1Q9NRV9 189 aa2.54□□□□□ -2
CLK1-209ENST00000472679 ZNF407Q9C0G0 2248 aa2.54□□□□□ -2
CLK1-209ENST00000472679 ADGRA3Q8IWK6 1321 aa2.53□□□□□ -2
CLK1-209ENST00000472679 A8MWL6 223 aa2.53□□□□□ -2
CLK1-209ENST00000472679 LINC01619G3V211 115 aa2.53□□□□□ -2
CLK1-209ENST00000472679 GOLGA8TH3BQL2 631 aa2.53□□□□□ -2
CLK1-209ENST00000472679 CXCR1P25024 350 aa2.53□□□□□ -2
CLK1-209ENST00000472679 IL3RAP26951 378 aa2.53□□□□□ -2
CLK1-209ENST00000472679 ATP6V0D1P61421 351 aa2.53□□□□□ -2
CLK1-209ENST00000472679 INCA1Q0VD86 236 aa2.53□□□□□ -2
CLK1-209ENST00000472679 HADHQ16836 314 aaKnown RBP2.53□□□□□ -2
CLK1-209ENST00000472679 KRTAP6-3Q3LI67 103 aa2.53□□□□□ -2
CLK1-209ENST00000472679 TMEM69Q5SWH9 247 aa2.53□□□□□ -2
CLK1-209ENST00000472679 STEAP4Q687X5 459 aa2.53□□□□□ -2
CLK1-209ENST00000472679 SLC30A8Q8IWU4 369 aa2.53□□□□□ -2
CLK1-209ENST00000472679 BBS7Q8IWZ6 715 aa2.53□□□□□ -2
CLK1-209ENST00000472679 LINC00469Q8N7U9 141 aa2.53□□□□□ -2
CLK1-209ENST00000472679 RCN3Q96D15 328 aa2.53□□□□□ -2
CLK1-209ENST00000472679 RDH12Q96NR8 316 aa2.53□□□□□ -2
CLK1-209ENST00000472679 ALS2CR12Q96Q35 445 aa2.53□□□□□ -2
CLK1-209ENST00000472679 MTG1Q9BT17 334 aaPredicted RBP2.53□□□□□ -2
CLK1-209ENST00000472679 PRSS16Q9NQE7 514 aa2.53□□□□□ -2
CLK1-209ENST00000472679 MRPL22Q9NWU5 206 aaKnown RBP2.53□□□□□ -2
CLK1-209ENST00000472679 C2orf16Q68DN1 1984 aa2.52□□□□□ -2.01
CLK1-209ENST00000472679 ZSWIM8A7E2V4 1837 aa2.52□□□□□ -2.01
CLK1-209ENST00000472679 LOC102724200A0A096LPH7 203 aaPredicted RBP2.52□□□□□ -2.01
CLK1-209ENST00000472679 A0A0B4J2E0 115 aa2.52□□□□□ -2.01
CLK1-209ENST00000472679 CASQ2O14958 399 aaPredicted RBP2.52□□□□□ -2.01
CLK1-209ENST00000472679 KLHL2O95198 593 aa2.52□□□□□ -2.01
CLK1-209ENST00000472679 MMP7P09237 267 aaPredicted RBP2.52□□□□□ -2.01
CLK1-209ENST00000472679 CD82P27701 267 aa2.52□□□□□ -2.01
CLK1-209ENST00000472679 KRTAP12-3P60328 96 aa2.52□□□□□ -2.01
CLK1-209ENST00000472679 FAM131AQ6UXB0 335 aa2.52□□□□□ -2.01
CLK1-209ENST00000472679 LRP11Q86VZ4 500 aa2.52□□□□□ -2.01
CLK1-209ENST00000472679 COMMD1Q8N668 190 aa2.52□□□□□ -2.01
CLK1-209ENST00000472679 INO80EQ8NBZ0 244 aaPredicted RBP2.52□□□□□ -2.01
CLK1-209ENST00000472679 SLC26A10Q8NG04 563 aa2.52□□□□□ -2.01
CLK1-209ENST00000472679 MS4A8Q9BY19 250 aa2.52□□□□□ -2.01
CLK1-209ENST00000472679 DEFB129Q9H1M3 183 aa2.52□□□□□ -2.01
CLK1-209ENST00000472679 TMEM100Q9NV29 134 aa2.52□□□□□ -2.01
CLK1-209ENST00000472679 LOXHD1Q8IVV2 1947 aa2.52□□□□□ -2.01
CLK1-209ENST00000472679 ZNF608Q9ULD9 1512 aaPredicted RBP2.52□□□□□ -2.01
CLK1-209ENST00000472679 CACNA1DQ01668 2161 aa2.51□□□□□ -2.01
CLK1-209ENST00000472679 SUPT3HB4E1H0 165 aa2.51□□□□□ -2.01
CLK1-209ENST00000472679 PTHP01270 115 aa2.51□□□□□ -2.01
CLK1-209ENST00000472679 MAS1P04201 325 aa2.51□□□□□ -2.01
CLK1-209ENST00000472679 INAFM2P0DMQ5 153 aa2.51□□□□□ -2.01
CLK1-209ENST00000472679 ZNF35P13682 527 aa2.51□□□□□ -2.01
CLK1-209ENST00000472679 HRES1P13985 223 aa2.51□□□□□ -2.01
CLK1-209ENST00000472679 LGALS3P17931 250 aaKnown RBP2.51□□□□□ -2.01
CLK1-209ENST00000472679 CLDN18P56856 261 aa2.51□□□□□ -2.01
CLK1-209ENST00000472679 DNAJC3Q13217 504 aa2.51□□□□□ -2.01
CLK1-209ENST00000472679 C5orf64Q2M2E5 130 aa2.51□□□□□ -2.01
CLK1-209ENST00000472679 ZNF678Q5SXM1 525 aa2.51□□□□□ -2.01
CLK1-209ENST00000472679 ZC4H2Q9NQZ6 224 aa2.51□□□□□ -2.01
CLK1-209ENST00000472679 NDRG2Q9UN36 371 aaKnown RBP2.51□□□□□ -2.01
CLK1-209ENST00000472679 FSTL3O95633 263 aa2.5□□□□□ -2.01
CLK1-209ENST00000472679 IGLV6-57P01721 117 aa2.5□□□□□ -2.01
CLK1-209ENST00000472679 TGM4P49221 684 aa2.5□□□□□ -2.01
CLK1-209ENST00000472679 MORN3Q6PF18 240 aaPredicted RBP2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms