RNA–Protein interactions for RNA: ENST00000472217.1

USF1-204, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 1,097 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-204ENST00000472217 WDFY2Q96P53 400 aa7.47□□□□□ -1.21
USF1-204ENST00000472217 TBX15Q96SF7 602 aa7.47□□□□□ -1.21
USF1-204ENST00000472217 CCL13Q99616 98 aa7.47□□□□□ -1.21
USF1-204ENST00000472217 PKP2Q99959 881 aa7.47□□□□□ -1.21
USF1-204ENST00000472217 MICU1Q9BPX6 476 aa7.47□□□□□ -1.21
USF1-204ENST00000472217 PCGF1Q9BSM1 259 aa7.47□□□□□ -1.21
USF1-204ENST00000472217 RTL8AQ9BWD3 113 aa7.47□□□□□ -1.21
USF1-204ENST00000472217 TTTY10Q9BZA0 68 aa7.47□□□□□ -1.21
USF1-204ENST00000472217 YIPF3Q9GZM5 350 aa7.47□□□□□ -1.21
USF1-204ENST00000472217 FGF23Q9GZV9 251 aaPredicted RBP7.47□□□□□ -1.21
USF1-204ENST00000472217 FAM206AQ9NX38 181 aa7.47□□□□□ -1.21
USF1-204ENST00000472217 DUX4Q9UBX2 424 aa7.47□□□□□ -1.21
USF1-204ENST00000472217 ZNF391Q9UJN7 358 aa7.47□□□□□ -1.21
USF1-204ENST00000472217 COPS3Q9UNS2 423 aa7.47□□□□□ -1.21
USF1-204ENST00000472217 MPC1Q9Y5U8 109 aa7.47□□□□□ -1.21
USF1-204ENST00000472217 CENPVL3A0A0U1RRI6 287 aa7.46□□□□□ -1.22
USF1-204ENST00000472217 P2RY10O00398 339 aa7.46□□□□□ -1.22
USF1-204ENST00000472217 HOXA3O43365 443 aaPredicted RBP7.46□□□□□ -1.22
USF1-204ENST00000472217 PRKYO43930 277 aa7.46□□□□□ -1.22
USF1-204ENST00000472217 MITFO75030 526 aaPredicted RBP7.46□□□□□ -1.22
USF1-204ENST00000472217 ECDO95905 644 aaPredicted RBP7.46□□□□□ -1.22
USF1-204ENST00000472217 CST4P01036 141 aa7.46□□□□□ -1.22
USF1-204ENST00000472217 AMY2BP19961 511 aa7.46□□□□□ -1.22
USF1-204ENST00000472217 EPHA2P29317 976 aa7.46□□□□□ -1.22
USF1-204ENST00000472217 BPIFB3P59826 476 aa7.46□□□□□ -1.22
USF1-204ENST00000472217 GMFBP60983 142 aa7.46□□□□□ -1.22
USF1-204ENST00000472217 ESRRGP62508 458 aa7.46□□□□□ -1.22
USF1-204ENST00000472217 FOXL1Q12952 345 aa7.46□□□□□ -1.22
USF1-204ENST00000472217 ATP6AP1Q15904 470 aa7.46□□□□□ -1.22
USF1-204ENST00000472217 METTL11BQ5VVY1 283 aa7.46□□□□□ -1.22
USF1-204ENST00000472217 KCTD8Q6ZWB6 473 aa7.46□□□□□ -1.22
USF1-204ENST00000472217 ZDHHC23Q8IYP9 409 aa7.46□□□□□ -1.22
USF1-204ENST00000472217 FAM216BQ8N7L0 139 aa7.46□□□□□ -1.22
USF1-204ENST00000472217 SCCPDHQ8NBX0 429 aa7.46□□□□□ -1.22
USF1-204ENST00000472217 PIGCQ92535 297 aa7.46□□□□□ -1.22
USF1-204ENST00000472217 TAF15Q92804 592 aaKnown RBP eCLIP7.46□□□□□ -1.22
USF1-204ENST00000472217 RPL3LQ92901 407 aaKnown RBP7.46□□□□□ -1.22
USF1-204ENST00000472217 SIRPDQ9H106 197 aa7.46□□□□□ -1.22
USF1-204ENST00000472217 WDR13Q9H1Z4 485 aa7.46□□□□□ -1.22
USF1-204ENST00000472217 PRDM13Q9H4Q3 707 aa7.46□□□□□ -1.22
USF1-204ENST00000472217 ABCB9Q9NP78 766 aa7.46□□□□□ -1.22
USF1-204ENST00000472217 KRT84Q9NSB2 600 aa7.46□□□□□ -1.22
USF1-204ENST00000472217 RPUSD1Q9UJJ7 312 aaKnown RBP7.46□□□□□ -1.22
USF1-204ENST00000472217 PCDHGB1Q9Y5G3 927 aa7.46□□□□□ -1.22
USF1-204ENST00000472217 ANK2Q01484 3957 aa7.45□□□□□ -1.22
USF1-204ENST00000472217 A0A0U1RQV5 110 aa7.45□□□□□ -1.22
USF1-204ENST00000472217 ZNF816-ZNF321PA0A0X1KG74 233 aa7.45□□□□□ -1.22
USF1-204ENST00000472217 TMEM269A0A1B0GVZ9 245 aa7.45□□□□□ -1.22
USF1-204ENST00000472217 ACOD1A6NK06 481 aa7.45□□□□□ -1.22
USF1-204ENST00000472217 TMEM210A6NLX4 147 aa7.45□□□□□ -1.22
USF1-204ENST00000472217 ZAR1LA6NP61 321 aa7.45□□□□□ -1.22
USF1-204ENST00000472217 G3V2T6 193 aa7.45□□□□□ -1.22
USF1-204ENST00000472217 AKR7A2O43488 359 aa7.45□□□□□ -1.22
USF1-204ENST00000472217 DCTDP32321 178 aa7.45□□□□□ -1.22
USF1-204ENST00000472217 MAP2K3P46734 347 aa7.45□□□□□ -1.22
USF1-204ENST00000472217 GPM6AP51674 278 aa7.45□□□□□ -1.22
USF1-204ENST00000472217 ARF6P62330 175 aa7.45□□□□□ -1.22
USF1-204ENST00000472217 ROM1Q03395 351 aa7.45□□□□□ -1.22
USF1-204ENST00000472217 MFGE8Q08431 387 aaPredicted RBP7.45□□□□□ -1.22
USF1-204ENST00000472217 PDCD1Q15116 288 aa7.45□□□□□ -1.22
USF1-204ENST00000472217 C11orf91Q3C1V1 193 aa7.45□□□□□ -1.22
USF1-204ENST00000472217 FAM76BQ5HYJ3 339 aa7.45□□□□□ -1.22
USF1-204ENST00000472217 DMRTC1Q5HYR2 192 aa7.45□□□□□ -1.22
USF1-204ENST00000472217 SLX4IPQ5VYV7 408 aa7.45□□□□□ -1.22
USF1-204ENST00000472217 C12orf73Q69YU5 71 aa7.45□□□□□ -1.22
USF1-204ENST00000472217 STUMQ69YW2 141 aa7.45□□□□□ -1.22
USF1-204ENST00000472217 KDM4DQ6B0I6 523 aa7.45□□□□□ -1.22
USF1-204ENST00000472217 DEGS2Q6QHC5 323 aa7.45□□□□□ -1.22
USF1-204ENST00000472217 MEPCEQ7L2J0 689 aaKnown RBP7.45□□□□□ -1.22
USF1-204ENST00000472217 SLC36A1Q7Z2H8 476 aa7.45□□□□□ -1.22
USF1-204ENST00000472217 COMMD2Q86X83 199 aa7.45□□□□□ -1.22
USF1-204ENST00000472217 ZNF679Q8IYX0 411 aa7.45□□□□□ -1.22
USF1-204ENST00000472217 OR5T2Q8NGG2 359 aa7.45□□□□□ -1.22
USF1-204ENST00000472217 OR10Z1Q8NGY1 313 aa7.45□□□□□ -1.22
USF1-204ENST00000472217 FAM81AQ8TBF8 368 aa7.45□□□□□ -1.22
USF1-204ENST00000472217 OR51E1Q8TCB6 317 aa7.45□□□□□ -1.22
USF1-204ENST00000472217 ASB17Q8WXJ9 295 aa7.45□□□□□ -1.22
USF1-204ENST00000472217 LHX4Q969G2 390 aa7.45□□□□□ -1.22
USF1-204ENST00000472217 ZDHHC16Q969W1 377 aa7.45□□□□□ -1.22
USF1-204ENST00000472217 C12orf43Q96C57 262 aaKnown RBP7.45□□□□□ -1.22
USF1-204ENST00000472217 RNF170Q96K19 258 aa7.45□□□□□ -1.22
USF1-204ENST00000472217 RAB3IPQ96QF0 476 aaPredicted RBP7.45□□□□□ -1.22
USF1-204ENST00000472217 OR8B4Q96RC9 309 aa7.45□□□□□ -1.22
USF1-204ENST00000472217 CNN2Q99439 309 aaKnown RBP7.45□□□□□ -1.22
USF1-204ENST00000472217 ZNF747Q9BV97 191 aa7.45□□□□□ -1.22
USF1-204ENST00000472217 MROQ9BYG7 248 aa7.45□□□□□ -1.22
USF1-204ENST00000472217 PRRG3Q9BZD7 231 aa7.45□□□□□ -1.22
USF1-204ENST00000472217 PBOV1Q9GZY1 135 aa7.45□□□□□ -1.22
USF1-204ENST00000472217 SNTG1Q9NSN8 517 aa7.45□□□□□ -1.22
USF1-204ENST00000472217 HAO2Q9NYQ3 351 aa7.45□□□□□ -1.22
USF1-204ENST00000472217 DNAJB11Q9UBS4 358 aa7.45□□□□□ -1.22
USF1-204ENST00000472217 AP4S1Q9Y587 144 aa7.45□□□□□ -1.22
USF1-204ENST00000472217 TMEM14AQ9Y6G1 99 aa7.45□□□□□ -1.22
USF1-204ENST00000472217 DOCK11Q5JSL3 2073 aa7.45□□□□□ -1.22
USF1-204ENST00000472217 IGHV1-69DA0A0B4J2H0 117 aa7.44□□□□□ -1.22
USF1-204ENST00000472217 SLC22A31A6NKX4 558 aa7.44□□□□□ -1.22
USF1-204ENST00000472217 NDUFB3O43676 98 aa7.44□□□□□ -1.22
USF1-204ENST00000472217 ZNF254O75437 659 aa7.44□□□□□ -1.22
USF1-204ENST00000472217 SRSF10O75494 262 aaKnown RBP7.44□□□□□ -1.22
USF1-204ENST00000472217 RHBDL1O75783 438 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms