RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 SERPINA1P01009 418 aa3.9□□□□□ -1.79
CCDC39-202ENST00000471307 SERPINA7P05543 415 aa3.9□□□□□ -1.79
CCDC39-202ENST00000471307 BCHEP06276 602 aa3.9□□□□□ -1.79
CCDC39-202ENST00000471307 DBIP07108 87 aaKnown RBP3.9□□□□□ -1.79
CCDC39-202ENST00000471307 COX6A1P12074 109 aa3.9□□□□□ -1.79
CCDC39-202ENST00000471307 NCK1P16333 377 aa3.9□□□□□ -1.79
CCDC39-202ENST00000471307 MGMTP16455 207 aa3.9□□□□□ -1.79
CCDC39-202ENST00000471307 ATP6V1B2P21281 511 aa3.9□□□□□ -1.79
CCDC39-202ENST00000471307 ZBTB25P24278 435 aa3.9□□□□□ -1.79
CCDC39-202ENST00000471307 SLC6A8P48029 635 aa3.9□□□□□ -1.79
CCDC39-202ENST00000471307 MRPS22P82650 360 aaKnown RBP3.9□□□□□ -1.79
CCDC39-202ENST00000471307 HPCAP84074 193 aa3.9□□□□□ -1.79
CCDC39-202ENST00000471307 CHRNB3Q05901 458 aa3.9□□□□□ -1.79
CCDC39-202ENST00000471307 FUT5Q11128 374 aa3.9□□□□□ -1.79
CCDC39-202ENST00000471307 EBPQ15125 230 aaKnown RBP3.9□□□□□ -1.79
CCDC39-202ENST00000471307 SPHARQ15513 63 aa3.9□□□□□ -1.79
CCDC39-202ENST00000471307 ZNF141Q15928 474 aa3.9□□□□□ -1.79
CCDC39-202ENST00000471307 CYBRD1Q53TN4 286 aa3.9□□□□□ -1.79
CCDC39-202ENST00000471307 ZNF311Q5JNZ3 666 aa3.9□□□□□ -1.79
CCDC39-202ENST00000471307 NCR3LG1Q68D85 454 aa3.9□□□□□ -1.79
CCDC39-202ENST00000471307 RTL6Q6ICC9 239 aa3.9□□□□□ -1.79
CCDC39-202ENST00000471307 H3F3CQ6NXT2 135 aa3.9□□□□□ -1.79
CCDC39-202ENST00000471307 NPSR1Q6W5P4 371 aa3.9□□□□□ -1.79
CCDC39-202ENST00000471307 YRDCQ86U90 279 aaKnown RBP3.9□□□□□ -1.79
CCDC39-202ENST00000471307 C9orf40Q8IXQ3 194 aa3.9□□□□□ -1.79
CCDC39-202ENST00000471307 ZNF321PQ8N8H1 164 aa3.9□□□□□ -1.79
CCDC39-202ENST00000471307 ANKFN1Q8N957 763 aa3.9□□□□□ -1.79
CCDC39-202ENST00000471307 MINDY2Q8NBR6 621 aa3.9□□□□□ -1.79
CCDC39-202ENST00000471307 CANT1Q8WVQ1 401 aa3.9□□□□□ -1.79
CCDC39-202ENST00000471307 NTNG2Q96CW9 530 aa3.9□□□□□ -1.79
CCDC39-202ENST00000471307 RAB39BQ96DA2 213 aa3.9□□□□□ -1.79
CCDC39-202ENST00000471307 PHYHIPLQ96FC7 376 aa3.9□□□□□ -1.79
CCDC39-202ENST00000471307 PYURFQ96I23 114 aa3.9□□□□□ -1.79
CCDC39-202ENST00000471307 GPR137Q96N19 417 aa3.9□□□□□ -1.79
CCDC39-202ENST00000471307 DOHHQ9BU89 302 aa3.9□□□□□ -1.79
CCDC39-202ENST00000471307 ALG12Q9BV10 488 aa3.9□□□□□ -1.79
CCDC39-202ENST00000471307 FUNDC2Q9BWH2 189 aa3.9□□□□□ -1.79
CCDC39-202ENST00000471307 DEFB126Q9BYW3 111 aa3.9□□□□□ -1.79
CCDC39-202ENST00000471307 NXF5Q9H1B4 397 aaKnown RBP3.9□□□□□ -1.79
CCDC39-202ENST00000471307 SLC38A1Q9H2H9 487 aa3.9□□□□□ -1.79
CCDC39-202ENST00000471307 ARMC7Q9H6L4 198 aa3.9□□□□□ -1.79
CCDC39-202ENST00000471307 CACYBPQ9HB71 228 aaKnown RBP3.9□□□□□ -1.79
CCDC39-202ENST00000471307 UBQLN4Q9NRR5 601 aa3.9□□□□□ -1.79
CCDC39-202ENST00000471307 ARMC1Q9NVT9 282 aa3.9□□□□□ -1.79
CCDC39-202ENST00000471307 ZNF319Q9P2F9 582 aa3.9□□□□□ -1.79
CCDC39-202ENST00000471307 SEC14L3Q9UDX4 400 aa3.9□□□□□ -1.79
CCDC39-202ENST00000471307 ZNF223Q9UK11 482 aaPredicted RBP3.9□□□□□ -1.79
CCDC39-202ENST00000471307 ANGPTL2Q9UKU9 493 aa3.9□□□□□ -1.79
CCDC39-202ENST00000471307 YARS2Q9Y2Z4 477 aaKnown RBP3.9□□□□□ -1.79
CCDC39-202ENST00000471307 WDR45Q9Y484 360 aa3.9□□□□□ -1.79
CCDC39-202ENST00000471307 AP4S1Q9Y587 144 aa3.9□□□□□ -1.79
CCDC39-202ENST00000471307 DOCK10Q96BY6 2186 aa3.9□□□□□ -1.79
CCDC39-202ENST00000471307 DSPPQ9NZW4 1301 aa3.9□□□□□ -1.79
CCDC39-202ENST00000471307 URB1O60287 2271 aaKnown RBP3.9□□□□□ -1.79
CCDC39-202ENST00000471307 ACACAQ13085 2346 aa3.89□□□□□ -1.79
CCDC39-202ENST00000471307 CEP295Q9C0D2 2601 aa3.89□□□□□ -1.79
CCDC39-202ENST00000471307 AKAP13Q12802 2813 aa3.89□□□□□ -1.79
CCDC39-202ENST00000471307 TRBV11-1A0A0K0K1C0 115 aa3.89□□□□□ -1.79
CCDC39-202ENST00000471307 XKRY2A2RUG3 117 aa3.89□□□□□ -1.79
CCDC39-202ENST00000471307 TMEM89A2RUT3 159 aa3.89□□□□□ -1.79
CCDC39-202ENST00000471307 OR6C70A6NIJ9 312 aa3.89□□□□□ -1.79
CCDC39-202ENST00000471307 KIAA0513O60268 411 aa3.89□□□□□ -1.79
CCDC39-202ENST00000471307 TSPAN2O60636 221 aa3.89□□□□□ -1.79
CCDC39-202ENST00000471307 REM1O75628 298 aa3.89□□□□□ -1.79
CCDC39-202ENST00000471307 RHBDL1O75783 438 aa3.89□□□□□ -1.79
CCDC39-202ENST00000471307 ZNF682O95780 498 aa3.89□□□□□ -1.79
CCDC39-202ENST00000471307 LGI1O95970 557 aa3.89□□□□□ -1.79
CCDC39-202ENST00000471307 LYNP07948 512 aa3.89□□□□□ -1.79
CCDC39-202ENST00000471307 OR9G9P0C7N8 305 aa3.89□□□□□ -1.79
CCDC39-202ENST00000471307 PABPC4LP0CB38 370 aaKnown RBP3.89□□□□□ -1.79
CCDC39-202ENST00000471307 CLUP10909 449 aa3.89□□□□□ -1.79
CCDC39-202ENST00000471307 TBXA2RP21731 343 aa3.89□□□□□ -1.79
CCDC39-202ENST00000471307 AQP1P29972 269 aa3.89□□□□□ -1.79
CCDC39-202ENST00000471307 PRDX2P32119 198 aa3.89□□□□□ -1.79
CCDC39-202ENST00000471307 CEBPDP49716 269 aaPredicted RBP3.89□□□□□ -1.79
CCDC39-202ENST00000471307 TMED10P49755 219 aaKnown RBP3.89□□□□□ -1.79
CCDC39-202ENST00000471307 MEOX2P50222 304 aa3.89□□□□□ -1.79
CCDC39-202ENST00000471307 CCL11P51671 97 aa3.89□□□□□ -1.79
CCDC39-202ENST00000471307 TGIF1Q15583 401 aa3.89□□□□□ -1.79
CCDC39-202ENST00000471307 DUSP7Q16829 419 aa3.89□□□□□ -1.79
CCDC39-202ENST00000471307 DHRS4L2Q6PKH6 230 aa3.89□□□□□ -1.79
CCDC39-202ENST00000471307 OPN5Q6U736 354 aa3.89□□□□□ -1.79
CCDC39-202ENST00000471307 ENPP6Q6UWR7 440 aa3.89□□□□□ -1.79
CCDC39-202ENST00000471307 RPS19BP1Q86WX3 136 aaKnown RBP3.89□□□□□ -1.79
CCDC39-202ENST00000471307 GRAMD2AQ8IUY3 354 aa3.89□□□□□ -1.79
CCDC39-202ENST00000471307 OR52P1PQ8NH57 321 aa3.89□□□□□ -1.79
CCDC39-202ENST00000471307 TRMT10AQ8TBZ6 339 aaKnown RBP3.89□□□□□ -1.79
CCDC39-202ENST00000471307 SLC22A8Q8TCC7 542 aa3.89□□□□□ -1.79
CCDC39-202ENST00000471307 GTSF1Q8WW33 167 aa3.89□□□□□ -1.79
CCDC39-202ENST00000471307 GEMIN6Q8WXD5 167 aaKnown RBP3.89□□□□□ -1.79
CCDC39-202ENST00000471307 SLC35B4Q969S0 331 aa3.89□□□□□ -1.79
CCDC39-202ENST00000471307 TMBIM1Q969X1 311 aa3.89□□□□□ -1.79
CCDC39-202ENST00000471307 TAMM41Q96BW9 452 aa3.89□□□□□ -1.79
CCDC39-202ENST00000471307 RMND5BQ96G75 393 aaPredicted RBP3.89□□□□□ -1.79
CCDC39-202ENST00000471307 C7orf34Q96L11 122 aa3.89□□□□□ -1.79
CCDC39-202ENST00000471307 COL21A1Q96P44 957 aa3.89□□□□□ -1.79
CCDC39-202ENST00000471307 SIGLEC12Q96PQ1 595 aa3.89□□□□□ -1.79
CCDC39-202ENST00000471307 S1PR3Q99500 378 aa3.89□□□□□ -1.79
CCDC39-202ENST00000471307 CHID1Q9BWS9 393 aa3.89□□□□□ -1.79
CCDC39-202ENST00000471307 ZNF160Q9HCG1 818 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms