RNA–Protein interactions for RNA: ENST00000470652.1

COL9A1-206, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-206ENST00000470652 EI24O14681 340 aa3.17□□□□□ -1.9
COL9A1-206ENST00000470652 CLOCKO15516 846 aa3.17□□□□□ -1.9
COL9A1-206ENST00000470652 DPM1O60762 260 aa3.17□□□□□ -1.9
COL9A1-206ENST00000470652 TOXO94900 526 aa3.17□□□□□ -1.9
COL9A1-206ENST00000470652 SNX4O95219 450 aa3.17□□□□□ -1.9
COL9A1-206ENST00000470652 SLC2A10O95528 541 aa3.17□□□□□ -1.9
COL9A1-206ENST00000470652 ATP6V1G2O95670 118 aa3.17□□□□□ -1.9
COL9A1-206ENST00000470652 CST1P01037 141 aa3.17□□□□□ -1.9
COL9A1-206ENST00000470652 IGHV3-9P01782 118 aa3.17□□□□□ -1.9
COL9A1-206ENST00000470652 BGLAPP02818 100 aa3.17□□□□□ -1.9
COL9A1-206ENST00000470652 HPNP05981 417 aa3.17□□□□□ -1.9
COL9A1-206ENST00000470652 STSP08842 583 aa3.17□□□□□ -1.9
COL9A1-206ENST00000470652 PSKH1P11801 424 aa3.17□□□□□ -1.9
COL9A1-206ENST00000470652 IFI30P13284 250 aa3.17□□□□□ -1.9
COL9A1-206ENST00000470652 ADRA2CP18825 462 aa3.17□□□□□ -1.9
COL9A1-206ENST00000470652 GRPRP30550 384 aa3.17□□□□□ -1.9
COL9A1-206ENST00000470652 SRD5A2P31213 254 aa3.17□□□□□ -1.9
COL9A1-206ENST00000470652 AQP2P41181 271 aa3.17□□□□□ -1.9
COL9A1-206ENST00000470652 SLC1A3P43003 542 aa3.17□□□□□ -1.9
COL9A1-206ENST00000470652 OMPP47874 163 aa3.17□□□□□ -1.9
COL9A1-206ENST00000470652 NPY4RP50391 375 aa3.17□□□□□ -1.9
COL9A1-206ENST00000470652 DAPP51397 102 aa3.17□□□□□ -1.9
COL9A1-206ENST00000470652 P2RY4P51582 365 aa3.17□□□□□ -1.9
COL9A1-206ENST00000470652 CAPZA1P52907 286 aa3.17□□□□□ -1.9
COL9A1-206ENST00000470652 PSMD4P55036 377 aaKnown RBP3.17□□□□□ -1.9
COL9A1-206ENST00000470652 NDUFV3P56181 108 aaKnown RBP3.17□□□□□ -1.9
COL9A1-206ENST00000470652 DSCR4P56555 118 aaPredicted RBP3.17□□□□□ -1.9
COL9A1-206ENST00000470652 NUP107P57740 925 aa3.17□□□□□ -1.9
COL9A1-206ENST00000470652 OR2B6P58173 313 aa3.17□□□□□ -1.9
COL9A1-206ENST00000470652 IL1RL1Q01638 556 aa3.17□□□□□ -1.9
COL9A1-206ENST00000470652 OR7A5Q15622 319 aa3.17□□□□□ -1.9
COL9A1-206ENST00000470652 TSC22D1Q15714 1073 aa3.17□□□□□ -1.9
COL9A1-206ENST00000470652 ATP6AP1Q15904 470 aa3.17□□□□□ -1.9
COL9A1-206ENST00000470652 CLEC12AQ5QGZ9 265 aa3.17□□□□□ -1.9
COL9A1-206ENST00000470652 PHYHD1Q5SRE7 291 aa3.17□□□□□ -1.9
COL9A1-206ENST00000470652 AP1ARQ63HQ0 302 aa3.17□□□□□ -1.9
COL9A1-206ENST00000470652 OR2T5Q6IEZ7 315 aa3.17□□□□□ -1.9
COL9A1-206ENST00000470652 B3GLCTQ6Y288 498 aa3.17□□□□□ -1.9
COL9A1-206ENST00000470652 ZNF730Q6ZMV8 503 aa3.17□□□□□ -1.9
COL9A1-206ENST00000470652 Q6ZVQ6 151 aa3.17□□□□□ -1.9
COL9A1-206ENST00000470652 ZNF550Q7Z398 422 aa3.17□□□□□ -1.9
COL9A1-206ENST00000470652 C5orf24Q7Z6I8 188 aa3.17□□□□□ -1.9
COL9A1-206ENST00000470652 GRAMD2AQ8IUY3 354 aa3.17□□□□□ -1.9
COL9A1-206ENST00000470652 CCDC71Q8IV32 467 aaPredicted RBP3.17□□□□□ -1.9
COL9A1-206ENST00000470652 DND1Q8IYX4 353 aaKnown RBP3.17□□□□□ -1.9
COL9A1-206ENST00000470652 OFCC1Q8IZS5 231 aa3.17□□□□□ -1.9
COL9A1-206ENST00000470652 GCNT2Q8N0V5 402 aa3.17□□□□□ -1.9
COL9A1-206ENST00000470652 CBR4Q8N4T8 237 aa3.17□□□□□ -1.9
COL9A1-206ENST00000470652 C10orf53Q8N6V4 93 aa3.17□□□□□ -1.9
COL9A1-206ENST00000470652 TMEM99Q8N816 258 aa3.17□□□□□ -1.9
COL9A1-206ENST00000470652 OR10G2Q8NGC3 310 aa3.17□□□□□ -1.9
COL9A1-206ENST00000470652 OR4K5Q8NGD3 323 aa3.17□□□□□ -1.9
COL9A1-206ENST00000470652 OR2T29Q8NH02 315 aa3.17□□□□□ -1.9
COL9A1-206ENST00000470652 OR4Q3Q8NH05 313 aa3.17□□□□□ -1.9
COL9A1-206ENST00000470652 OR51A7Q8NH64 312 aa3.17□□□□□ -1.9
COL9A1-206ENST00000470652 OR10D3Q8NH80 312 aa3.17□□□□□ -1.9
COL9A1-206ENST00000470652 FNDC9Q8TBE3 224 aa3.17□□□□□ -1.9
COL9A1-206ENST00000470652 SSC4DQ8WTU2 575 aa3.17□□□□□ -1.9
COL9A1-206ENST00000470652 ABHD3Q8WU67 409 aa3.17□□□□□ -1.9
COL9A1-206ENST00000470652 RASD2Q96D21 266 aa3.17□□□□□ -1.9
COL9A1-206ENST00000470652 GPR137Q96N19 417 aa3.17□□□□□ -1.9
COL9A1-206ENST00000470652 TNFRSF13CQ96RJ3 184 aa3.17□□□□□ -1.9
COL9A1-206ENST00000470652 MBOAT4Q96T53 435 aa3.17□□□□□ -1.9
COL9A1-206ENST00000470652 ZNF559Q9BR84 538 aa3.17□□□□□ -1.9
COL9A1-206ENST00000470652 EMC6Q9BV81 110 aa3.17□□□□□ -1.9
COL9A1-206ENST00000470652 MMADHCQ9H3L0 296 aaPredicted RBP3.17□□□□□ -1.9
COL9A1-206ENST00000470652 ZDHHC11Q9H8X9 412 aa3.17□□□□□ -1.9
COL9A1-206ENST00000470652 TMEM27Q9HBJ8 222 aa3.17□□□□□ -1.9
COL9A1-206ENST00000470652 MCCC2Q9HCC0 563 aa3.17□□□□□ -1.9
COL9A1-206ENST00000470652 EXOSC3Q9NQT5 275 aaKnown RBP3.17□□□□□ -1.9
COL9A1-206ENST00000470652 AGPAT4Q9NRZ5 378 aa3.17□□□□□ -1.9
COL9A1-206ENST00000470652 MRGBPQ9NV56 204 aa3.17□□□□□ -1.9
COL9A1-206ENST00000470652 ARMC1Q9NVT9 282 aa3.17□□□□□ -1.9
COL9A1-206ENST00000470652 CALML5Q9NZT1 146 aa3.17□□□□□ -1.9
COL9A1-206ENST00000470652 PDP1Q9P0J1 537 aaPredicted RBP3.17□□□□□ -1.9
COL9A1-206ENST00000470652 MRTO4Q9UKD2 239 aaKnown RBP3.17□□□□□ -1.9
COL9A1-206ENST00000470652 BOKQ9UMX3 212 aaPredicted RBP3.17□□□□□ -1.9
COL9A1-206ENST00000470652 SAMD4AQ9UPU9 718 aaKnown RBP3.17□□□□□ -1.9
COL9A1-206ENST00000470652 SLC35A3Q9Y2D2 325 aa3.17□□□□□ -1.9
COL9A1-206ENST00000470652 SLC9A8Q9Y2E8 581 aa3.17□□□□□ -1.9
COL9A1-206ENST00000470652 KLF13Q9Y2Y9 288 aaPredicted RBP3.17□□□□□ -1.9
COL9A1-206ENST00000470652 IFT52Q9Y366 437 aa3.17□□□□□ -1.9
COL9A1-206ENST00000470652 FAM215AQ9Y5M1 114 aa3.17□□□□□ -1.9
COL9A1-206ENST00000470652 NOTCH2Q04721 2471 aa3.16□□□□□ -1.9
COL9A1-206ENST00000470652 FLNCQ14315 2725 aa3.16□□□□□ -1.9
COL9A1-206ENST00000470652 HRNRQ86YZ3 2850 aaPredicted RBP3.16□□□□□ -1.9
COL9A1-206ENST00000470652 POLEQ07864 2286 aa3.16□□□□□ -1.9
COL9A1-206ENST00000470652 HCFC1P51610 2035 aa3.16□□□□□ -1.9
COL9A1-206ENST00000470652 DCHS2Q6V1P9 2916 aa3.16□□□□□ -1.9
COL9A1-206ENST00000470652 IGKV1D-43A0A0B4J1Z2 117 aa3.16□□□□□ -1.9
COL9A1-206ENST00000470652 HTR3EA5X5Y0 456 aa3.16□□□□□ -1.9
COL9A1-206ENST00000470652 H0YHG0 523 aa3.16□□□□□ -1.9
COL9A1-206ENST00000470652 KLRC4-KLRK1H3BQV0 150 aa3.16□□□□□ -1.9
COL9A1-206ENST00000470652 CHP2O43745 196 aa3.16□□□□□ -1.9
COL9A1-206ENST00000470652 MGRN1O60291 552 aa3.16□□□□□ -1.9
COL9A1-206ENST00000470652 OR10H3O60404 316 aa3.16□□□□□ -1.9
COL9A1-206ENST00000470652 EIF4E2O60573 245 aaKnown RBP3.16□□□□□ -1.9
COL9A1-206ENST00000470652 NPIPB7O75200 414 aa3.16□□□□□ -1.9
COL9A1-206ENST00000470652 E2F6O75461 281 aa3.16□□□□□ -1.9
COL9A1-206ENST00000470652 GMNNO75496 209 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms