RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 THBS3P49746 956 aa5.32□□□□□ -1.56
PTCD3-208ENST00000469585 ERFP50548 548 aa5.32□□□□□ -1.56
PTCD3-208ENST00000469585 KLF3P57682 345 aaPredicted RBP5.32□□□□□ -1.56
PTCD3-208ENST00000469585 LCN6P62502 163 aa5.32□□□□□ -1.56
PTCD3-208ENST00000469585 FMODQ06828 376 aa5.32□□□□□ -1.56
PTCD3-208ENST00000469585 MZT1Q08AG7 82 aa5.32□□□□□ -1.56
PTCD3-208ENST00000469585 GAGE1Q13065 139 aa5.32□□□□□ -1.56
PTCD3-208ENST00000469585 GAGE4Q13068 117 aa5.32□□□□□ -1.56
PTCD3-208ENST00000469585 IRF3Q14653 427 aa5.32□□□□□ -1.56
PTCD3-208ENST00000469585 ATP6AP1Q15904 470 aa5.32□□□□□ -1.56
PTCD3-208ENST00000469585 SNCBQ16143 134 aa5.32□□□□□ -1.56
PTCD3-208ENST00000469585 SNAPC1Q16533 368 aa5.32□□□□□ -1.56
PTCD3-208ENST00000469585 HIST3H3Q16695 136 aa5.32□□□□□ -1.56
PTCD3-208ENST00000469585 PGGHGQ32M88 737 aa5.32□□□□□ -1.56
PTCD3-208ENST00000469585 KLHL12Q53G59 568 aa5.32□□□□□ -1.56
PTCD3-208ENST00000469585 MESTQ5EB52 335 aa5.32□□□□□ -1.56
PTCD3-208ENST00000469585 PABPC1L2AQ5JQF8 200 aa5.32□□□□□ -1.56
PTCD3-208ENST00000469585 SIGIRRQ6IA17 410 aa5.32□□□□□ -1.56
PTCD3-208ENST00000469585 SKA3Q8IX90 412 aa5.32□□□□□ -1.56
PTCD3-208ENST00000469585 FTMTQ8N4E7 242 aa5.32□□□□□ -1.56
PTCD3-208ENST00000469585 WDR31Q8NA23 367 aa5.32□□□□□ -1.56
PTCD3-208ENST00000469585 ZNF555Q8NEP9 628 aa5.32□□□□□ -1.56
PTCD3-208ENST00000469585 SDR9C7Q8NEX9 313 aa5.32□□□□□ -1.56
PTCD3-208ENST00000469585 SYNPRQ8TBG9 265 aa5.32□□□□□ -1.56
PTCD3-208ENST00000469585 PGAM5Q96HS1 289 aa5.32□□□□□ -1.56
PTCD3-208ENST00000469585 NMNAT3Q96T66 252 aa5.32□□□□□ -1.56
PTCD3-208ENST00000469585 TMEM204Q9BSN7 226 aa5.32□□□□□ -1.56
PTCD3-208ENST00000469585 COPS4Q9BT78 406 aa5.32□□□□□ -1.56
PTCD3-208ENST00000469585 C9orf16Q9BUW7 83 aa5.32□□□□□ -1.56
PTCD3-208ENST00000469585 HCAR1Q9BXC0 346 aa5.32□□□□□ -1.56
PTCD3-208ENST00000469585 EGLN1Q9GZT9 426 aa5.32□□□□□ -1.56
PTCD3-208ENST00000469585 RACGAP1Q9H0H5 632 aa5.32□□□□□ -1.56
PTCD3-208ENST00000469585 VCX3BQ9H321 246 aa5.32□□□□□ -1.56
PTCD3-208ENST00000469585 EGLN3Q9H6Z9 239 aa5.32□□□□□ -1.56
PTCD3-208ENST00000469585 PLEKHF2Q9H8W4 249 aa5.32□□□□□ -1.56
PTCD3-208ENST00000469585 C8orf4Q9NR00 106 aa5.32□□□□□ -1.56
PTCD3-208ENST00000469585 POLE4Q9NR33 117 aa5.32□□□□□ -1.56
PTCD3-208ENST00000469585 IL20Q9NYY1 176 aa5.32□□□□□ -1.56
PTCD3-208ENST00000469585 CRNNQ9UBG3 495 aaPredicted RBP5.32□□□□□ -1.56
PTCD3-208ENST00000469585 ATPIF1Q9UII2 106 aa5.32□□□□□ -1.56
PTCD3-208ENST00000469585 TMEM14AQ9Y6G1 99 aa5.32□□□□□ -1.56
PTCD3-208ENST00000469585 SESN1Q9Y6P5 492 aa5.32□□□□□ -1.56
PTCD3-208ENST00000469585 COL12A1Q99715 3063 aa5.32□□□□□ -1.56
PTCD3-208ENST00000469585 CACNA1DQ01668 2161 aa5.32□□□□□ -1.56
PTCD3-208ENST00000469585 SHISA9B4DS77 424 aa5.31□□□□□ -1.56
PTCD3-208ENST00000469585 PHYHO14832 338 aa5.31□□□□□ -1.56
PTCD3-208ENST00000469585 SYNGR3O43761 229 aa5.31□□□□□ -1.56
PTCD3-208ENST00000469585 TIMM8AO60220 97 aaPredicted RBP5.31□□□□□ -1.56
PTCD3-208ENST00000469585 SNAP29O95721 258 aa5.31□□□□□ -1.56
PTCD3-208ENST00000469585 IGLV1-44P01699 117 aa5.31□□□□□ -1.56
PTCD3-208ENST00000469585 PRSS2P07478 247 aa5.31□□□□□ -1.56
PTCD3-208ENST00000469585 ACAA1P09110 424 aaPredicted RBP5.31□□□□□ -1.56
PTCD3-208ENST00000469585 ZNF32P17041 273 aa5.31□□□□□ -1.56
PTCD3-208ENST00000469585 GABRB1P18505 474 aa5.31□□□□□ -1.56
PTCD3-208ENST00000469585 CFL1P23528 166 aaKnown RBP5.31□□□□□ -1.56
PTCD3-208ENST00000469585 EDNRAP25101 427 aa5.31□□□□□ -1.56
PTCD3-208ENST00000469585 GLRXP35754 106 aa5.31□□□□□ -1.56
PTCD3-208ENST00000469585 EVX1P49640 407 aa5.31□□□□□ -1.56
PTCD3-208ENST00000469585 ZNF133P52736 654 aaPredicted RBP5.31□□□□□ -1.56
PTCD3-208ENST00000469585 UCP2P55851 309 aa5.31□□□□□ -1.56
PTCD3-208ENST00000469585 GRB2P62993 217 aaKnown RBP5.31□□□□□ -1.56
PTCD3-208ENST00000469585 RUNX1T1Q06455 604 aa5.31□□□□□ -1.56
PTCD3-208ENST00000469585 GINS1Q14691 196 aa5.31□□□□□ -1.56
PTCD3-208ENST00000469585 ZSCAN26Q16670 478 aa5.31□□□□□ -1.56
PTCD3-208ENST00000469585 PCGF3Q3KNV8 242 aa5.31□□□□□ -1.56
PTCD3-208ENST00000469585 SLC35D3Q5M8T2 416 aa5.31□□□□□ -1.56
PTCD3-208ENST00000469585 PHYHD1Q5SRE7 291 aa5.31□□□□□ -1.56
PTCD3-208ENST00000469585 KCTD18Q6PI47 426 aaPredicted RBP5.31□□□□□ -1.56
PTCD3-208ENST00000469585 SLC25A47Q6Q0C1 308 aa5.31□□□□□ -1.56
PTCD3-208ENST00000469585 UGT2A3Q6UWM9 527 aa5.31□□□□□ -1.56
PTCD3-208ENST00000469585 PRSS57Q6UWY2 283 aa5.31□□□□□ -1.56
PTCD3-208ENST00000469585 CFAP77Q6ZQR2 320 aa5.31□□□□□ -1.56
PTCD3-208ENST00000469585 FAM122BQ7Z309 247 aa5.31□□□□□ -1.56
PTCD3-208ENST00000469585 GID4Q8IVV7 300 aa5.31□□□□□ -1.56
PTCD3-208ENST00000469585 PAPD5Q8NDF8 572 aaKnown RBP5.31□□□□□ -1.56
PTCD3-208ENST00000469585 OR1J1Q8NGS3 322 aa5.31□□□□□ -1.56
PTCD3-208ENST00000469585 PYDC1Q8WXC3 89 aa5.31□□□□□ -1.56
PTCD3-208ENST00000469585 ELMOD3Q96FG2 381 aa5.31□□□□□ -1.56
PTCD3-208ENST00000469585 TIMD4Q96H15 378 aa5.31□□□□□ -1.56
PTCD3-208ENST00000469585 INTS14Q96SY0 518 aa5.31□□□□□ -1.56
PTCD3-208ENST00000469585 ATF6BQ99941 703 aa5.31□□□□□ -1.56
PTCD3-208ENST00000469585 ZNF416Q9BWM5 594 aa5.31□□□□□ -1.56
PTCD3-208ENST00000469585 CACNG6Q9BXT2 260 aa5.31□□□□□ -1.56
PTCD3-208ENST00000469585 RSPO3Q9BXY4 272 aaPredicted RBP5.31□□□□□ -1.56
PTCD3-208ENST00000469585 OR2H1Q9GZK4 316 aa5.31□□□□□ -1.56
PTCD3-208ENST00000469585 OR51V1Q9H2C8 321 aa5.31□□□□□ -1.56
PTCD3-208ENST00000469585 RIBC2Q9H4K1 309 aa5.31□□□□□ -1.56
PTCD3-208ENST00000469585 OPA3Q9H6K4 179 aa5.31□□□□□ -1.56
PTCD3-208ENST00000469585 NOX3Q9HBY0 568 aa5.31□□□□□ -1.56
PTCD3-208ENST00000469585 CMC2Q9NRP2 79 aa5.31□□□□□ -1.56
PTCD3-208ENST00000469585 NKIRAS2Q9NYR9 191 aa5.31□□□□□ -1.56
PTCD3-208ENST00000469585 NPAP1Q9NZP6 1156 aa5.31□□□□□ -1.56
PTCD3-208ENST00000469585 GRIP1Q9Y3R0 1128 aa5.31□□□□□ -1.56
PTCD3-208ENST00000469585 RELNP78509 3460 aa5.3□□□□□ -1.56
PTCD3-208ENST00000469585 ZNF878C9JN71 531 aa5.3□□□□□ -1.56
PTCD3-208ENST00000469585 H7C417 338 aa5.3□□□□□ -1.56
PTCD3-208ENST00000469585 MPZL2O60487 215 aa5.3□□□□□ -1.56
PTCD3-208ENST00000469585 H2BFMP0C1H6 154 aa5.3□□□□□ -1.56
PTCD3-208ENST00000469585 CD99P14209 185 aa5.3□□□□□ -1.56
PTCD3-208ENST00000469585 CTLA4P16410 223 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms