RNA–Protein interactions for RNA: ENST00000469511.1

PTPN4-209, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 476 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-209ENST00000469511 RAP2AP10114 183 aa4.19□□□□□ -1.74
PTPN4-209ENST00000469511 IFI30P13284 250 aa4.19□□□□□ -1.74
PTPN4-209ENST00000469511 CCL3L1P16619 93 aa4.19□□□□□ -1.74
PTPN4-209ENST00000469511 GPX2P18283 190 aa4.19□□□□□ -1.74
PTPN4-209ENST00000469511 CD24P25063 80 aa4.19□□□□□ -1.74
PTPN4-209ENST00000469511 OR1E2P47887 323 aa4.19□□□□□ -1.74
PTPN4-209ENST00000469511 THBS3P49746 956 aa4.19□□□□□ -1.74
PTPN4-209ENST00000469511 DGCR2P98153 550 aa4.19□□□□□ -1.74
PTPN4-209ENST00000469511 IL5RAQ01344 420 aa4.19□□□□□ -1.74
PTPN4-209ENST00000469511 ECH1Q13011 328 aa4.19□□□□□ -1.74
PTPN4-209ENST00000469511 AQP6Q13520 282 aa4.19□□□□□ -1.74
PTPN4-209ENST00000469511 KCNJ8Q15842 424 aa4.19□□□□□ -1.74
PTPN4-209ENST00000469511 WHAMMP3Q1A5X7 153 aa4.19□□□□□ -1.74
PTPN4-209ENST00000469511 KLHL22Q53GT1 634 aa4.19□□□□□ -1.74
PTPN4-209ENST00000469511 KHDC1LQ5JSQ8 128 aa4.19□□□□□ -1.74
PTPN4-209ENST00000469511 LRIF1Q5T3J3 769 aa4.19□□□□□ -1.74
PTPN4-209ENST00000469511 STUMQ69YW2 141 aa4.19□□□□□ -1.74
PTPN4-209ENST00000469511 WDR82Q6UXN9 313 aa4.19□□□□□ -1.74
PTPN4-209ENST00000469511 ZNF788Q6ZQV5 615 aa4.19□□□□□ -1.74
PTPN4-209ENST00000469511 PTCHD4Q6ZW05 846 aa4.19□□□□□ -1.74
PTPN4-209ENST00000469511 FAM122BQ7Z309 247 aa4.19□□□□□ -1.74
PTPN4-209ENST00000469511 CENPVQ7Z7K6 275 aaPredicted RBP4.19□□□□□ -1.74
PTPN4-209ENST00000469511 IFT20Q8IY31 132 aa4.19□□□□□ -1.74
PTPN4-209ENST00000469511 CNPY4Q8N129 248 aa4.19□□□□□ -1.74
PTPN4-209ENST00000469511 OR5L1Q8NGL2 311 aa4.19□□□□□ -1.74
PTPN4-209ENST00000469511 OR9Q1Q8NGQ5 310 aa4.19□□□□□ -1.74
PTPN4-209ENST00000469511 OR13C2Q8NGS9 318 aa4.19□□□□□ -1.74
PTPN4-209ENST00000469511 TMEM239Q8WW34 195 aa4.19□□□□□ -1.74
PTPN4-209ENST00000469511 SPRYD4Q8WW59 207 aaPredicted RBP4.19□□□□□ -1.74
PTPN4-209ENST00000469511 ACOT11Q8WXI4 607 aaPredicted RBP4.19□□□□□ -1.74
PTPN4-209ENST00000469511 MPP4Q96JB8 637 aa4.19□□□□□ -1.74
PTPN4-209ENST00000469511 COG8Q96MW5 612 aa4.19□□□□□ -1.74
PTPN4-209ENST00000469511 ZNF583Q96ND8 569 aa4.19□□□□□ -1.74
PTPN4-209ENST00000469511 ZNF649Q9BS31 505 aa4.19□□□□□ -1.74
PTPN4-209ENST00000469511 HCAR1Q9BXC0 346 aa4.19□□□□□ -1.74
PTPN4-209ENST00000469511 FGF23Q9GZV9 251 aaPredicted RBP4.19□□□□□ -1.74
PTPN4-209ENST00000469511 SYT4Q9H2B2 425 aa4.19□□□□□ -1.74
PTPN4-209ENST00000469511 TMEM38AQ9H6F2 299 aa4.19□□□□□ -1.74
PTPN4-209ENST00000469511 RMND5AQ9H871 391 aa4.19□□□□□ -1.74
PTPN4-209ENST00000469511 RAB18Q9NP72 206 aa4.19□□□□□ -1.74
PTPN4-209ENST00000469511 PALMDQ9NP74 551 aa4.19□□□□□ -1.74
PTPN4-209ENST00000469511 PNRC2Q9NPJ4 139 aaKnown RBP4.19□□□□□ -1.74
PTPN4-209ENST00000469511 SDR39U1Q9NRG7 319 aaPredicted RBP4.19□□□□□ -1.74
PTPN4-209ENST00000469511 C19orf12Q9NSK7 152 aa4.19□□□□□ -1.74
PTPN4-209ENST00000469511 NKX1-2Q9UD57 310 aaPredicted RBP4.19□□□□□ -1.74
PTPN4-209ENST00000469511 RIMS3Q9UJD0 308 aa4.19□□□□□ -1.74
PTPN4-209ENST00000469511 TSSC4Q9Y5U2 329 aaPredicted RBP4.19□□□□□ -1.74
PTPN4-209ENST00000469511 ABCA13Q86UQ4 5058 aa4.19□□□□□ -1.74
PTPN4-209ENST00000469511 MUC4Q99102 2169 aa4.19□□□□□ -1.74
PTPN4-209ENST00000469511 ALMS1Q8TCU4 4167 aa4.18□□□□□ -1.74
PTPN4-209ENST00000469511 TEX13CA0A0J9YWL9 993 aa4.18□□□□□ -1.74
PTPN4-209ENST00000469511 A0A1W2PQ09 198 aa4.18□□□□□ -1.74
PTPN4-209ENST00000469511 H0YAE9 185 aa4.18□□□□□ -1.74
PTPN4-209ENST00000469511 M0R1W7 72 aa4.18□□□□□ -1.74
PTPN4-209ENST00000469511 CDC42EP2O14613 210 aa4.18□□□□□ -1.74
PTPN4-209ENST00000469511 CDIPTO14735 213 aa4.18□□□□□ -1.74
PTPN4-209ENST00000469511 AKR7A2O43488 359 aa4.18□□□□□ -1.74
PTPN4-209ENST00000469511 SERPINB7O75635 380 aa4.18□□□□□ -1.74
PTPN4-209ENST00000469511 RHBDL1O75783 438 aa4.18□□□□□ -1.74
PTPN4-209ENST00000469511 SLC2A1P11166 492 aa4.18□□□□□ -1.74
PTPN4-209ENST00000469511 IDO1P14902 403 aa4.18□□□□□ -1.74
PTPN4-209ENST00000469511 NDUFB7P17568 137 aa4.18□□□□□ -1.74
PTPN4-209ENST00000469511 POU1F1P28069 291 aa4.18□□□□□ -1.74
PTPN4-209ENST00000469511 PEX2P28328 305 aa4.18□□□□□ -1.74
PTPN4-209ENST00000469511 RPS27P42677 84 aaKnown RBP4.18□□□□□ -1.74
PTPN4-209ENST00000469511 CDKN2AP42771 156 aaKnown RBP4.18□□□□□ -1.74
PTPN4-209ENST00000469511 GUCA1AP43080 201 aaPredicted RBP4.18□□□□□ -1.74
PTPN4-209ENST00000469511 YAP1P46937 504 aaKnown RBP4.18□□□□□ -1.74
PTPN4-209ENST00000469511 SLC9A3P48764 834 aa4.18□□□□□ -1.74
PTPN4-209ENST00000469511 CEBPDP49716 269 aaPredicted RBP4.18□□□□□ -1.74
PTPN4-209ENST00000469511 MXRA7P84157 204 aa4.18□□□□□ -1.74
PTPN4-209ENST00000469511 STX3Q13277 289 aa4.18□□□□□ -1.74
PTPN4-209ENST00000469511 SSX2Q16385 188 aa4.18□□□□□ -1.74
PTPN4-209ENST00000469511 AANATQ16613 207 aa4.18□□□□□ -1.74
PTPN4-209ENST00000469511 MICBQ29980 383 aa4.18□□□□□ -1.74
PTPN4-209ENST00000469511 GLYATL3Q5SZD4 288 aa4.18□□□□□ -1.74
PTPN4-209ENST00000469511 ATPAF1Q5TC12 328 aaPredicted RBP4.18□□□□□ -1.74
PTPN4-209ENST00000469511 NCR3LG1Q68D85 454 aa4.18□□□□□ -1.74
PTPN4-209ENST00000469511 TBPL2Q6SJ96 375 aa4.18□□□□□ -1.74
PTPN4-209ENST00000469511 DLEU7Q6UYE1 221 aa4.18□□□□□ -1.74
PTPN4-209ENST00000469511 ZNF782Q6ZMW2 699 aaPredicted RBP4.18□□□□□ -1.74
PTPN4-209ENST00000469511 MSANTD1Q6ZTZ1 278 aa4.18□□□□□ -1.74
PTPN4-209ENST00000469511 PGAP1Q75T13 922 aa4.18□□□□□ -1.74
PTPN4-209ENST00000469511 SLC36A1Q7Z2H8 476 aa4.18□□□□□ -1.74
PTPN4-209ENST00000469511 HDDC2Q7Z4H3 204 aa4.18□□□□□ -1.74
PTPN4-209ENST00000469511 ZNF329Q86UD4 541 aa4.18□□□□□ -1.74
PTPN4-209ENST00000469511 FAM185AQ8N0U4 392 aa4.18□□□□□ -1.74
PTPN4-209ENST00000469511 ZNRF1Q8ND25 227 aa4.18□□□□□ -1.74
PTPN4-209ENST00000469511 Q8NFD4 153 aa4.18□□□□□ -1.74
PTPN4-209ENST00000469511 OR56B2PQ8NGI1 322 aa4.18□□□□□ -1.74
PTPN4-209ENST00000469511 ST8SIA2Q92186 375 aa4.18□□□□□ -1.74
PTPN4-209ENST00000469511 RPL3LQ92901 407 aaKnown RBP4.18□□□□□ -1.74
PTPN4-209ENST00000469511 BPIFA2Q96DR5 249 aa4.18□□□□□ -1.74
PTPN4-209ENST00000469511 C16orf45Q96MC5 204 aaPredicted RBP4.18□□□□□ -1.74
PTPN4-209ENST00000469511 OR14A2Q96R54 314 aa4.18□□□□□ -1.74
PTPN4-209ENST00000469511 P2RX4Q99571 388 aa4.18□□□□□ -1.74
PTPN4-209ENST00000469511 COQ7Q99807 217 aa4.18□□□□□ -1.74
PTPN4-209ENST00000469511 NUAK2Q9H093 628 aa4.18□□□□□ -1.74
PTPN4-209ENST00000469511 MYLK2Q9H1R3 596 aa4.18□□□□□ -1.74
PTPN4-209ENST00000469511 METTL8Q9H825 291 aaKnown RBP4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms